scf6955c, scf6955c (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	scf6955c
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Primer 1	scf6955c.forward primer: ATGCCTGCCATTCATCATTT
Primer 2	scf6955c.reverse primer: TTTCCGTCATTTCGTCCTTC
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr03	supercontig	Vcev1_p0.Chr03:25882894..25883153 .
chr3_H1	supercontig	chr3_H1:22672055..22672328 .
Vmac_chr04	supercontig	Vmac_chr04:15369550..15369829 .
chr4	supercontig	chr4:21328885..21329170 .

Publications


Year	Publication
2013	Georgi L, Johnson-Cicalese J, Honig J, Das SP, Rajah VD, Bhattacharya D, Bassil N, Rowland LJ, Polashock J, Vorsa N. The first genetic map of the American cranberry: exploration of synteny conservation and quantitative trait loci. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2013 Mar; 126(3):673-92.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-[BGx(BLxNL)]95_x_ GH1x35-F1	LG4	N/A	45.77	scf6955c	View
2	Cranberry-CNJ02-1-2007	LG4	N/A	44.07	scf6955c	View
3	Cranberry-Crimson_Queen-2007	LG4	N/A	39.2	scf6955c	View
4	Cranberry-Mullica_Queen-2007	LG4	N/A	48.6	scf6955c	View
5	Cranberry-Unifiedmap2013	LG2	N/A	49.5	scf6955c	View
6	Cranberry-CNJ02-1-2017	LG04	N/A	48.4	scf6955c	View
7	Cranberry-Crimson_Queen-2017	LG04	N/A	16	scf6955c	View
8	Cranberry-Mullica_Queen-2017	LG04	N/A	49.5	scf6955c	View
9	Cranberry-[BG//BL/BN]95-F1	LG04	N/A	34.01	scf6955c	View
10	Cranberry-Composite_map-F1	LG04	N/A	29.89	scf6955c	View
11	Cranberry-Crimson_Queen-F1	LG04	N/A	35.71	scf6955c	View
12	Cranberry-Mullica_Queen_1-F1	LG04	N/A	53.09	scf6955c	View
13	Cranberry-BB/CQ-F1	LG02	N/A	40.21	scf6955c	View
14	Cranberry-BB/CQ-F1	LG02	N/A	51.87	scf6955c	View