SCF79620, SCF79620 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF79620
Genbank ID	KP278768
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)15
Primer 1	SCF79620.forward primer: TAATAGCCCTTATACCTGCACT
Primer 2	SCF79620.reverse primer: GAGCATAGACAGCATACAAAAG
Max Length	218
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278768

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr06	supercontig	Vmac_chr06:1112725..1112890 .
chr6	supercontig	chr6:36900699..36900876 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG6	N/A	99.12	SCF79620	View
2	Cranberry-Crimson_Queen-2007	LG6	N/A	85.3	SCF79620	View
3	Cranberry-Mullica_Queen-2007	LG6	N/A	116.5	SCF79620	View
4	Cranberry-Crimson_Queen-F1	LG06	N/A	0	SCF79620	View
5	Cranberry-Mullica_Queen_1-F1	LG06	N/A	0	SCF79620	View
6	Cranberry-CNJ02-1-2017	LG06	N/A	90.6	SCF79620	View
7	Cranberry-Crimson_Queen-2017	LG06	N/A	78.7	SCF79620	View
8	Cranberry-Mullica_Queen-2017	LG06	N/A	102.4	SCF79620	View
9	Cranberry-Composite_map-F1	LG06	N/A	0.9	SCF79620	View