SCF88396, SCF88396 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF88396
Genbank ID	KP278784
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)9
Primer 1	SCF88396.forward primer: ATAGAGGTTAATTGGTCCTCG
Primer 2	SCF88396.reverse primer: GACGAAGAACGACAGGTAGAT
Max Length	292
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278784

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr09	supercontig	Vmac_chr09:31000490..31000754 .
chr9	supercontig	chr9:10460936..10461192 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG9	N/A	62.36	SCF88396	View
2	Cranberry-Crimson_Queen-2007	LG9	N/A	57.1	SCF88396	View
3	Blueberry-F1#10_x_W85-23-F1-2017	LG09	N/A	26.4	SCF88396	View
4	Blueberry-F1#10-2017	LG09	N/A	60.7	SCF88396	View
5	Blueberry-W85-23-2017	LG09	N/A	56.2	SCF88396	View
6	Cranberry-CNJ02-1-2017	LG09	N/A	55.9	SCF88396	View
7	Cranberry-Crimson_Queen-2017	LG09	N/A	47.8	SCF88396	View
8	Cranberry-Composite_map-F1	LG09	N/A	30.92	SCF88396	View
9	Cranberry-Crimson_Queen-F1	LG09	N/A	22.7	SCF88396	View
10	Cranberry-Stevens-F1	LG09	N/A	21.23	SCF88396	View