SCF9068, SCF9068 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF9068
Genbank ID	KP278624
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TC)14
Primer 1	SCF9068.forward primer: AAATCTAGGTAGGAGCAGGTCT
Primer 2	SCF9068.reverse primer: ATGGAGGAGGAGATATGTGAT
Max Length	186
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278624

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr05	supercontig	Vmac_chr05:9245973..9246124 .
chr5	supercontig	chr5:23329468..23329619 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-[BGx(BLxNL)]95_x_ GH1x35-F1	LG5	N/A	0	SCF9068	View
2	Cranberry-CNJ02-1-2007	LG5	N/A	71.57	SCF9068	View
3	Cranberry-Mullica_Queen-2007	LG5	N/A	78.5	SCF9068	View
4	Cranberry-CNJ02-1-2017	LG05	N/A	66.3	SCF9068	View
5	Cranberry-Mullica_Queen-2017	LG05	N/A	69.3	SCF9068	View
6	Cranberry-[BG//BL/BN]95-F1	LG05	N/A	61.82	SCF9068	View
7	Cranberry-Composite_map-F1	LG05	N/A	61.82	SCF9068	View
8	Cranberry-GH1/35-F1	LG05	N/A	61.48	SCF9068	View
9	Cranberry-Mullica_Queen_1-F1	LG05	N/A	72.19	SCF9068	View
10	Cranberry-Mullica_Queen_2-F1	LG05	N/A	63.06	SCF9068	View
11	Cranberry-Stevens-F1	LG05	N/A	61.11	SCF9068	View