CHI01251A | GDV

Marker Overview

Marker Overview


Name	CHI01251A
Genbank ID	N/A
Type	SSR
Species	Vaccinium sp.
Primer 1	CHI01251A.Forward: GGTTGCCAACTAAGGACGTATC
Primer 2	CHI01251A.Reverse: CATCACGAAGTTGTTCCTTGAA
Publication	[view all]
Contact	Brandon Schlautman

Contact

Name

Details

Brandon Schlautman

First name:	Brandon
Last name:	Schlautman
Institution:	Department of Horticulture, University of Wisconsin-Madison
Address:	Department of Horticulture, University of Wisconsin-Madison, 1575 Linden Dr. Madison, WI 53706, USA
Country:	USA
Email:	schlautman@wisc.edu
Last update:	Apr 2017

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr10	supercontig	Vcev1_p0.Chr10:33280414..33280635 .
VaccDscaff20	supercontig	VaccDscaff20:22633433..22633647 .
scaffold01251	supercontig	scaffold01251:6250..6472 .
Vmac_chr08	supercontig	Vmac_chr08:24971868..24972085 .
chr8	supercontig	chr8:22724995..22725212 .
Chr10_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr10_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:14280911..14281137 .
Chr10_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr10_Vaccinium_vitis-idaea_ssp_minus:12063251..12063477 .

Publications


Year	Publication
2018	Schlautman B, Diaz-Garcia L, Covarrubias-Pazaran G, Schlautman N, Vorsa N, Polashock J, Ogden E, Brown A, Lin Y, Bassil N, Buck E, Wiedow C, McCallum S, Graham J, Iorizzo M, Rowland L, Zalapa J. Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular breeding. 2018; 38(1):9.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Blueberry-F1#10_x_W85-23-F1-2017	LG08	N/A	49.1	CHI01251A	View
2	Blueberry-F1#10-2017	LG08	N/A	47.8	CHI01251A	View
3	Blueberry-W85-23-2017	LG08	N/A	57.8	CHI01251A	View