CHS00491B | GDV

Marker Overview

Marker Overview


Name	CHS00491B
Genbank ID	N/A
Type	SSR
Species	Vaccinium sp.
Primer 1	CHS00491B.Forward: AATGAAGCAAAGGCATAAGACC
Primer 2	CHS00491B.Reverse: GAAGTTCCTCTCCGAACTTTGA
Publication	[view all]
Contact	Brandon Schlautman

Contact

Name

Details

Brandon Schlautman

First name:	Brandon
Last name:	Schlautman
Institution:	Department of Horticulture, University of Wisconsin-Madison
Address:	Department of Horticulture, University of Wisconsin-Madison, 1575 Linden Dr. Madison, WI 53706, USA
Country:	USA
Email:	schlautman@wisc.edu
Last update:	Apr 2017

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr02	supercontig	Vcev1_p0.Chr02:64902874..64903125 .
scaffold00491	supercontig	scaffold00491:159141..159395 .
chr2_H1	supercontig	chr2_H1:55850376..55850608 .
scaffold00439	supercontig	scaffold00439:44642..44881 .
Chr02	supercontig	Chr02:46186833..46187075 .
Chr02_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr02_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:54054504..54054712 .
Chr02_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr02_Vaccinium_vitis-idaea_ssp_minus:50514873..50515081 .

Publications


Year	Publication
2018	Schlautman B, Diaz-Garcia L, Covarrubias-Pazaran G, Schlautman N, Vorsa N, Polashock J, Ogden E, Brown A, Lin Y, Bassil N, Buck E, Wiedow C, McCallum S, Graham J, Iorizzo M, Rowland L, Zalapa J. Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular breeding. 2018; 38(1):9.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Blueberry-F1#10_x_W85-23-F1-2017	LG01	N/A	1.1	CHS00491B	View
2	Blueberry-F1#10-2017	LG01	N/A	0	CHS00491B	View
3	Blueberry-W85-23-2017	LG01	N/A	0	CHS00491B	View