GW397259

EST Overview
NameGW397259
Unique NameGW397259
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length159
Libraries
Library NameType
LIBEST_026032 Vaccinium corymbosum SSH-C.acutatum-resistancecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of GW397259 vs. DB:swissprot:display
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 5.487e-9
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 3
Query:   24 LILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            L++  + HITEAQ+GVC G  GNNLPS  E + LYKS  IGR+R+
Sbjct:   14 LLVATNIHITEAQLGVCYGMMGNNLPSHSEVIQLYKSRNIGRLRL 58          
BLAST of GW397259 vs. DB:swissprot:display
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.723e-8
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 3
Query:   24 LILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            L++  + HITEAQ+GVC G  GNNLPS  E + LYKS  I R+R+
Sbjct:   14 LLVATNIHITEAQIGVCYGMMGNNLPSHSEVIQLYKSRNIRRLRL 58          
BLAST of GW397259 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s26210.1 ()

HSP 1 Score: 49.6766 bits (117), Expect = 5.333e-7
Identity = 22/45 (48.89%), Postives = 35/45 (77.78%), Query Frame = 3
Query:   27 ILLVHFHITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            +++    +++AQ +GVC G++GNNLPS QE V L+++N IGRMR+
Sbjct:   15 LIISRLTLSDAQSIGVCYGKNGNNLPSDQEVVSLFQTNVIGRMRI 59          
BLAST of GW397259 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s05490.1 ()

HSP 1 Score: 49.2914 bits (116), Expect = 6.965e-7
Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 3
Query:   66 GVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            GVC G++GNNLPS QE V LY++N IGRMR+
Sbjct:    6 GVCCGKNGNNLPSDQEVVSLYQTNSIGRMRI 36          
BLAST of GW397259 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0019s10310.1 ()

HSP 1 Score: 49.2914 bits (116), Expect = 6.965e-7
Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 3
Query:   66 GVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            GVC G++GNNLPS QE V LY++N IGRMR+
Sbjct:    1 GVCCGKNGNNLPSDQEVVSLYQTNSIGRMRI 31          
BLAST of GW397259 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0016s05800.1 ()

HSP 1 Score: 48.9062 bits (115), Expect = 9.097e-7
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 3
Query:    6 PFLVSLLIL----LVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            P ++S+++L    L     T AQ+GVC G +GN LP +QE +DLY   GI RMR+
Sbjct:   11 PSMISIMLLFGLLLASLDTTGAQIGVCYGMNGN-LPPAQEVIDLYNQRGIRRMRL 64          
BLAST of GW397259 vs. P. persica 1.0 peptide
Match: ppa007999m ()

HSP 1 Score: 59.3066 bits (142), Expect = 4.560e-10
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 3
Query:    3 KPFLVSLLILLV----HFHITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            K  + S+L+LLV       IT AQ VGVC G++GNNLPS  + V LYKSNGIGRMR+
Sbjct:   12 KTLMASILLLLVLLMPALQITGAQSVGVCYGRNGNNLPSESDVVGLYKSNGIGRMRI 68          
BLAST of GW397259 vs. P. persica 1.0 peptide
Match: ppa024759m ()

HSP 1 Score: 49.6766 bits (117), Expect = 3.613e-7
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 3
Query:   45 HITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            H+T A +GVCNG  G++LP   E V LYK+N I RMR+
Sbjct:    4 HLTRAPIGVCNGMVGDDLPPQAEVVSLYKTNNIPRMRL 41          
BLAST of GW397259 vs. TrEMBL
Match: Q9XFW8|Q9XFW8_BETVU (Glucan endo-1,3-beta-D-glucosidase OS=Beta vulgaris subsp. vulgaris GN=Glu2 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.315e-8
Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 3
Query:   12 LVSLLILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            L+ L+++L    +TEAQ+GVCNG+ GNNLPS ++ V LYKS GI RMR+
Sbjct:   13 LLFLVVILPSIQLTEAQIGVCNGRLGNNLPSEEDVVSLYKSRGITRMRI 61          
BLAST of GW397259 vs. TrEMBL
Match: Q84Y07|Q84Y07_FRAAN (Beta-1,3-glucanase OS=Fragaria ananassa GN=BG2-1 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.244e-8
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 3
Query:    9 FLVSLLILLVHF----HITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            F+  +L+LLV F     IT AQ  GVC G++GNNLPS  E VDLYKSNGIGRMR+
Sbjct:   12 FMAPILLLLVLFMPALQITGAQSAGVCYGRNGNNLPSDTEVVDLYKSNGIGRMRI 66          
BLAST of GW397259 vs. TrEMBL
Match: Q84Y06|Q84Y06_FRAAN (Beta-1,3-glucanase (Fragment) OS=Fragaria ananassa GN=BG2-1 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.998e-8
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 3
Query:    6 PFLVSLLILLVHFHITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            P L+ L++ +    IT AQ  GVC G++GNNLPS  E  DLYKSNGIGRMR+
Sbjct:   15 PILLPLVLFMPALQITGAQSAGVCYGRNGNNLPSDTEVADLYKSNGIGRMRI 66          
BLAST of GW397259 vs. TrEMBL
Match: Q56AP0|Q56AP0_FRAAN (Beta-1,3-glucanase OS=Fragaria ananassa GN=BG2-3 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.525e-8
Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 3
Query:    9 FLVSLLILLVHF----HITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            F+  +L+LLV F     IT AQ  GVC G++G+NLPS  E VDLYKSNGIGRMR+
Sbjct:   12 FMAPILLLLVLFMPALQITGAQSAGVCYGRNGDNLPSDTEVVDLYKSNGIGRMRI 66          
BLAST of GW397259 vs. TrEMBL
Match: O65360|O65360_SOLTU (1,3-beta-glucan glucanohydrolase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.113e-7
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 3
Query:   24 LILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            L++  + HITEAQ+GVC G  GNNLPS  E + LYKS  IGR+R+
Sbjct:   14 LLVATNIHITEAQLGVCYGMMGNNLPSHSEVIQLYKSRNIGRLRL 58          
BLAST of GW397259 vs. TrEMBL
Match: Q84RT7|Q84RT7_FRAAN (Beta-1,3-glucanase OS=Fragaria ananassa GN=HouGlu III PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.240e-7
Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 3
Query:    9 FLVSLLILLVHF----HITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            F+  +L+LLV F     IT  Q  GVC G++G+NLPS  E +DLYKSNGIGRMR+
Sbjct:   12 FMAPILLLLVLFMPALQITGGQSAGVCYGRNGDNLPSDTEVIDLYKSNGIGRMRI 66          
BLAST of GW397259 vs. TrEMBL
Match: Q84RT6|Q84RT6_FRAAN (Beta-1,3-glucanase OS=Fragaria ananassa GN=HouGlu III PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.240e-7
Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 3
Query:    9 FLVSLLILLVHF----HITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            F+  +L+LLV F     IT  Q  GVC G++G+NLPS  E +DLYKSNGIGRMR+
Sbjct:   12 FMTPILLLLVLFMPALQITGGQSAGVCYGRNGDNLPSDTEVIDLYKSNGIGRMRI 66          
BLAST of GW397259 vs. TrEMBL
Match: Q84JM2|Q84JM2_FRAAN (Beta-1,3-glucanase OS=Fragaria ananassa GN=ToyoGluIII PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.240e-7
Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 3
Query:    9 FLVSLLILLVHF----HITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            F+  +L+LLV F     IT  Q  GVC G++G+NLPS  E +DLYKSNGIGRMR+
Sbjct:   12 FMAPILLLLVLFMPALQITGGQSAGVCYGRNGDNLPSDTEVIDLYKSNGIGRMRI 66          
BLAST of GW397259 vs. TrEMBL
Match: Q2HU14|Q2HU14_MEDTR (Glycoside hydrolase, family 17 OS=Medicago truncatula GN=MtrDRAFT_AC149491g12v2 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.526e-7
Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 3
Query:   12 LVSLLILL----VHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            + SLL+L     V+  +T AQ+GVC G  GNNLPS +EA+DL KSN I RMR+
Sbjct:    9 MASLLLLFALFTVNLRLTSAQIGVCYGMMGNNLPSQREAIDLCKSNNIKRMRL 61          
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01031543001 (assembled CDS)

HSP 1 Score: 55.8398 bits (133), Expect = 4.327e-9
Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 3
Query:    3 KPFLVSLL---ILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            +PF+V LL   +++    I    +GVC G++GNNLPS+ + ++LYKSNGIG MR+
Sbjct:    7 RPFVVVLLLGFVIMSTITIGAQSIGVCYGRNGNNLPSASQVINLYKSNGIGSMRI 61          
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01033545001 (assembled CDS)

HSP 1 Score: 53.9138 bits (128), Expect = 1.644e-8
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 3
Query:   12 LVSLLILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            L+ L +L+ + H+TEAQ+GVC G  G+NLP  +E V+LY  N   RMR+
Sbjct:   17 LLLLGLLMTNLHLTEAQIGVCYGTLGDNLPPPEEVVELYTQNNFQRMRL 65          

HSP 2 Score: 50.447 bits (119), Expect = 1.818e-7
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 3
Query:   27 ILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            +L+  FHIT A  GVC G  G+NLP   E +DLYK N I +MR+
Sbjct:  366 LLVATFHITGANTGVCYGLLGDNLPPPHEVIDLYKRNNIQKMRI 409          
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01033542001 (assembled CDS)

HSP 1 Score: 53.9138 bits (128), Expect = 1.644e-8
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 3
Query:   12 LVSLLILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            L+ L +L+ + H+TEAQ+GVC G  G+NLP  +E V+LY  N   RMR+
Sbjct:   17 LLLLGLLMTNLHLTEAQIGVCYGTLGDNLPPPEEVVELYTQNNFQRMRL 65          
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01031544001 (assembled CDS)

HSP 1 Score: 53.9138 bits (128), Expect = 1.644e-8
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 3
Query:    3 KPFLVSLL---ILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            KP +V LL   +++    I    +GVC G +GNNLPS+ + ++LYKSNGIG MR+
Sbjct:    7 KPLVVVLLLGFVIMSTLTIGAQSIGVCYGTNGNNLPSASQVINLYKSNGIGSMRI 61          
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01033543001 (assembled CDS)

HSP 1 Score: 51.6026 bits (122), Expect = 8.161e-8
Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 3
Query:   27 ILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            +LL  F IT A  GVC G  GNNLP   E +DLYK N I RMR+
Sbjct:   10 LLLATFQITGANTGVCYGLLGNNLPPPHEVIDLYKHNNIPRMRI 53          
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01033540001 (assembled CDS)

HSP 1 Score: 48.1358 bits (113), Expect = 9.023e-7
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 3
Query:   27 ILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            +L+    IT AQ+GVC G++GNNLP+  E V LY    I RMR+
Sbjct:   10 LLMASLEITGAQIGVCYGRNGNNLPAPGEVVALYNQYNIRRMRL 53          
BLAST of GW397259 vs. TAIR peptide
Match: AT3G57270.1 (| Symbols: BG1 | beta-1,3-glucanase 1 | chr3:21191336-21193118 REVERSE LENGTH=340)

HSP 1 Score: 48.9062 bits (115), Expect = 7.733e-7
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 3
Query:    9 FLVSLLILLVHFHI----TEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158
            FL SL +LL  F +    T  QVGVC G++GNNLPS  E + L+K   I R+R+
Sbjct:    5 FLASLTLLLGLFFVNTNPTGGQVGVCYGRNGNNLPSPAETIALFKQKNIQRVRL 58          
The following BLAST results are available for this feature:
BLAST of GW397259 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
E132_SOLTU5.487e-957.78Glucan endo-1,3-beta-glucosidase, basic isoform 2 ... [more]
E13B_SOLLC2.723e-855.56Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]
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BLAST of GW397259 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
POPTR_0001s26210.15.333e-748.89[more]
POPTR_0009s05490.16.965e-767.74[more]
POPTR_0019s10310.16.965e-767.74[more]
POPTR_0016s05800.19.097e-745.45[more]
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BLAST of GW397259 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
ppa007999m4.560e-1057.89[more]
ppa024759m3.613e-755.26[more]
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BLAST of GW397259 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 9
Match NameE-valueIdentityDescription
Q9XFW8|Q9XFW8_BETVU1.315e-857.14Glucan endo-1,3-beta-D-glucosidase OS=Beta vulgari... [more]
Q84Y07|Q84Y07_FRAAN2.244e-861.82Beta-1,3-glucanase OS=Fragaria ananassa GN=BG2-1 P... [more]
Q84Y06|Q84Y06_FRAAN4.998e-857.69Beta-1,3-glucanase (Fragment) OS=Fragaria ananassa... [more]
Q56AP0|Q56AP0_FRAAN8.525e-860.00Beta-1,3-glucanase OS=Fragaria ananassa GN=BG2-3 P... [more]
O65360|O65360_SOLTU1.113e-757.781,3-beta-glucan glucanohydrolase OS=Solanum tubero... [more]
Q84RT7|Q84RT7_FRAAN3.240e-756.36Beta-1,3-glucanase OS=Fragaria ananassa GN=HouGlu ... [more]
Q84RT6|Q84RT6_FRAAN3.240e-756.36Beta-1,3-glucanase OS=Fragaria ananassa GN=HouGlu ... [more]
Q84JM2|Q84JM2_FRAAN3.240e-756.36Beta-1,3-glucanase OS=Fragaria ananassa GN=ToyoGlu... [more]
Q2HU14|Q2HU14_MEDTR5.526e-754.72Glycoside hydrolase, family 17 OS=Medicago truncat... [more]
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BLAST of GW397259 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 6
Match NameE-valueIdentityDescription
GSVIVT010315430014.327e-947.27assembled CDS[more]
GSVIVT010335450011.644e-848.98assembled CDS[more]
GSVIVT010335420011.644e-848.98assembled CDS[more]
GSVIVT010315440011.644e-847.27assembled CDS[more]
GSVIVT010335430018.161e-856.82assembled CDS[more]
GSVIVT010335400019.023e-750.00assembled CDS[more]
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BLAST of GW397259 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G57270.17.733e-748.15| Symbols: BG1 | beta-1,3-glucanase 1 | chr3:21191... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000490Glycoside hydrolase, family 17PFAMPF00332Glyco_hydro_17coord: 21..52
score: 5.5
IPR013781Glycoside hydrolase, subgroup, catalytic coreGENE3D3.20.20.80no descriptioncoord: 21..52
score: 7.3
IPR017853Glycoside hydrolase, catalytic coreSUPERFAMILY51445(Trans)glycosidasescoord: 21..52
score: 1.4

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GW397259 ID=GW397259; Name=GW397259; organism=Vaccinium corymbosum; type=EST; length=159bp
ACAAACCTTTTCTTGTTTCTCTATTAATTCTACTTGTGCATTTCCATATA
ACAGAAGCGCAAGTTGGGGTGTGCAACGGACAAGATGGCAACAATCTACC
ATCCAGTCAAGAAGCAGTTGACCTCTACAAATCCAATGGCATTGGAAGGA
TGAGAATGT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0043169cation binding
Vocabulary: INTERPRO
TermDefinition
IPR000490Glyco_hydro_17
IPR013781Glycoside hydrolase, subgroup, catalytic core
IPR017853Glycoside_hydrolase_SF