GW397259
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GW397259 vs. DB:swissprot:display
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 5.487e-9 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 3 Query: 24 LILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 L++ + HITEAQ+GVC G GNNLPS E + LYKS IGR+R+ Sbjct: 14 LLVATNIHITEAQLGVCYGMMGNNLPSHSEVIQLYKSRNIGRLRL 58
BLAST of GW397259 vs. DB:swissprot:display
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 2.723e-8 Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 3 Query: 24 LILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 L++ + HITEAQ+GVC G GNNLPS E + LYKS I R+R+ Sbjct: 14 LLVATNIHITEAQIGVCYGMMGNNLPSHSEVIQLYKSRNIRRLRL 58
BLAST of GW397259 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s26210.1 () HSP 1 Score: 49.6766 bits (117), Expect = 5.333e-7 Identity = 22/45 (48.89%), Postives = 35/45 (77.78%), Query Frame = 3 Query: 27 ILLVHFHITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 +++ +++AQ +GVC G++GNNLPS QE V L+++N IGRMR+ Sbjct: 15 LIISRLTLSDAQSIGVCYGKNGNNLPSDQEVVSLFQTNVIGRMRI 59
BLAST of GW397259 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s05490.1 () HSP 1 Score: 49.2914 bits (116), Expect = 6.965e-7 Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 3 Query: 66 GVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 GVC G++GNNLPS QE V LY++N IGRMR+ Sbjct: 6 GVCCGKNGNNLPSDQEVVSLYQTNSIGRMRI 36
BLAST of GW397259 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0019s10310.1 () HSP 1 Score: 49.2914 bits (116), Expect = 6.965e-7 Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 3 Query: 66 GVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 GVC G++GNNLPS QE V LY++N IGRMR+ Sbjct: 1 GVCCGKNGNNLPSDQEVVSLYQTNSIGRMRI 31
BLAST of GW397259 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0016s05800.1 () HSP 1 Score: 48.9062 bits (115), Expect = 9.097e-7 Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 3 Query: 6 PFLVSLLIL----LVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 P ++S+++L L T AQ+GVC G +GN LP +QE +DLY GI RMR+ Sbjct: 11 PSMISIMLLFGLLLASLDTTGAQIGVCYGMNGN-LPPAQEVIDLYNQRGIRRMRL 64
BLAST of GW397259 vs. P. persica 1.0 peptide
Match: ppa007999m () HSP 1 Score: 59.3066 bits (142), Expect = 4.560e-10 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 3 Query: 3 KPFLVSLLILLV----HFHITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 K + S+L+LLV IT AQ VGVC G++GNNLPS + V LYKSNGIGRMR+ Sbjct: 12 KTLMASILLLLVLLMPALQITGAQSVGVCYGRNGNNLPSESDVVGLYKSNGIGRMRI 68
BLAST of GW397259 vs. P. persica 1.0 peptide
Match: ppa024759m () HSP 1 Score: 49.6766 bits (117), Expect = 3.613e-7 Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 3 Query: 45 HITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 H+T A +GVCNG G++LP E V LYK+N I RMR+ Sbjct: 4 HLTRAPIGVCNGMVGDDLPPQAEVVSLYKTNNIPRMRL 41
BLAST of GW397259 vs. TrEMBL
Match: Q9XFW8|Q9XFW8_BETVU (Glucan endo-1,3-beta-D-glucosidase OS=Beta vulgaris subsp. vulgaris GN=Glu2 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.315e-8 Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 12 LVSLLILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 L+ L+++L +TEAQ+GVCNG+ GNNLPS ++ V LYKS GI RMR+ Sbjct: 13 LLFLVVILPSIQLTEAQIGVCNGRLGNNLPSEEDVVSLYKSRGITRMRI 61
BLAST of GW397259 vs. TrEMBL
Match: Q84Y07|Q84Y07_FRAAN (Beta-1,3-glucanase OS=Fragaria ananassa GN=BG2-1 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.244e-8 Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 3 Query: 9 FLVSLLILLVHF----HITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 F+ +L+LLV F IT AQ GVC G++GNNLPS E VDLYKSNGIGRMR+ Sbjct: 12 FMAPILLLLVLFMPALQITGAQSAGVCYGRNGNNLPSDTEVVDLYKSNGIGRMRI 66
BLAST of GW397259 vs. TrEMBL
Match: Q84Y06|Q84Y06_FRAAN (Beta-1,3-glucanase (Fragment) OS=Fragaria ananassa GN=BG2-1 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.998e-8 Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 3 Query: 6 PFLVSLLILLVHFHITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 P L+ L++ + IT AQ GVC G++GNNLPS E DLYKSNGIGRMR+ Sbjct: 15 PILLPLVLFMPALQITGAQSAGVCYGRNGNNLPSDTEVADLYKSNGIGRMRI 66
BLAST of GW397259 vs. TrEMBL
Match: Q56AP0|Q56AP0_FRAAN (Beta-1,3-glucanase OS=Fragaria ananassa GN=BG2-3 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.525e-8 Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 3 Query: 9 FLVSLLILLVHF----HITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 F+ +L+LLV F IT AQ GVC G++G+NLPS E VDLYKSNGIGRMR+ Sbjct: 12 FMAPILLLLVLFMPALQITGAQSAGVCYGRNGDNLPSDTEVVDLYKSNGIGRMRI 66
BLAST of GW397259 vs. TrEMBL
Match: O65360|O65360_SOLTU (1,3-beta-glucan glucanohydrolase OS=Solanum tuberosum PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.113e-7 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 3 Query: 24 LILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 L++ + HITEAQ+GVC G GNNLPS E + LYKS IGR+R+ Sbjct: 14 LLVATNIHITEAQLGVCYGMMGNNLPSHSEVIQLYKSRNIGRLRL 58
BLAST of GW397259 vs. TrEMBL
Match: Q84RT7|Q84RT7_FRAAN (Beta-1,3-glucanase OS=Fragaria ananassa GN=HouGlu III PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.240e-7 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 9 FLVSLLILLVHF----HITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 F+ +L+LLV F IT Q GVC G++G+NLPS E +DLYKSNGIGRMR+ Sbjct: 12 FMAPILLLLVLFMPALQITGGQSAGVCYGRNGDNLPSDTEVIDLYKSNGIGRMRI 66
BLAST of GW397259 vs. TrEMBL
Match: Q84RT6|Q84RT6_FRAAN (Beta-1,3-glucanase OS=Fragaria ananassa GN=HouGlu III PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.240e-7 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 9 FLVSLLILLVHF----HITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 F+ +L+LLV F IT Q GVC G++G+NLPS E +DLYKSNGIGRMR+ Sbjct: 12 FMTPILLLLVLFMPALQITGGQSAGVCYGRNGDNLPSDTEVIDLYKSNGIGRMRI 66
BLAST of GW397259 vs. TrEMBL
Match: Q84JM2|Q84JM2_FRAAN (Beta-1,3-glucanase OS=Fragaria ananassa GN=ToyoGluIII PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.240e-7 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 9 FLVSLLILLVHF----HITEAQ-VGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 F+ +L+LLV F IT Q GVC G++G+NLPS E +DLYKSNGIGRMR+ Sbjct: 12 FMAPILLLLVLFMPALQITGGQSAGVCYGRNGDNLPSDTEVIDLYKSNGIGRMRI 66
BLAST of GW397259 vs. TrEMBL
Match: Q2HU14|Q2HU14_MEDTR (Glycoside hydrolase, family 17 OS=Medicago truncatula GN=MtrDRAFT_AC149491g12v2 PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.526e-7 Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 3 Query: 12 LVSLLILL----VHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 + SLL+L V+ +T AQ+GVC G GNNLPS +EA+DL KSN I RMR+ Sbjct: 9 MASLLLLFALFTVNLRLTSAQIGVCYGMMGNNLPSQREAIDLCKSNNIKRMRL 61
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01031543001 (assembled CDS) HSP 1 Score: 55.8398 bits (133), Expect = 4.327e-9 Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 3 KPFLVSLL---ILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 +PF+V LL +++ I +GVC G++GNNLPS+ + ++LYKSNGIG MR+ Sbjct: 7 RPFVVVLLLGFVIMSTITIGAQSIGVCYGRNGNNLPSASQVINLYKSNGIGSMRI 61
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01033545001 (assembled CDS) HSP 1 Score: 53.9138 bits (128), Expect = 1.644e-8 Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 3 Query: 12 LVSLLILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 L+ L +L+ + H+TEAQ+GVC G G+NLP +E V+LY N RMR+ Sbjct: 17 LLLLGLLMTNLHLTEAQIGVCYGTLGDNLPPPEEVVELYTQNNFQRMRL 65 HSP 2 Score: 50.447 bits (119), Expect = 1.818e-7 Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 3 Query: 27 ILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 +L+ FHIT A GVC G G+NLP E +DLYK N I +MR+ Sbjct: 366 LLVATFHITGANTGVCYGLLGDNLPPPHEVIDLYKRNNIQKMRI 409
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01033542001 (assembled CDS) HSP 1 Score: 53.9138 bits (128), Expect = 1.644e-8 Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 3 Query: 12 LVSLLILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 L+ L +L+ + H+TEAQ+GVC G G+NLP +E V+LY N RMR+ Sbjct: 17 LLLLGLLMTNLHLTEAQIGVCYGTLGDNLPPPEEVVELYTQNNFQRMRL 65
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01031544001 (assembled CDS) HSP 1 Score: 53.9138 bits (128), Expect = 1.644e-8 Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 3 Query: 3 KPFLVSLL---ILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 KP +V LL +++ I +GVC G +GNNLPS+ + ++LYKSNGIG MR+ Sbjct: 7 KPLVVVLLLGFVIMSTLTIGAQSIGVCYGTNGNNLPSASQVINLYKSNGIGSMRI 61
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01033543001 (assembled CDS) HSP 1 Score: 51.6026 bits (122), Expect = 8.161e-8 Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 3 Query: 27 ILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 +LL F IT A GVC G GNNLP E +DLYK N I RMR+ Sbjct: 10 LLLATFQITGANTGVCYGLLGNNLPPPHEVIDLYKHNNIPRMRI 53
BLAST of GW397259 vs. Vitis vinifera peptide
Match: GSVIVT01033540001 (assembled CDS) HSP 1 Score: 48.1358 bits (113), Expect = 9.023e-7 Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 3 Query: 27 ILLVHFHITEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 +L+ IT AQ+GVC G++GNNLP+ E V LY I RMR+ Sbjct: 10 LLMASLEITGAQIGVCYGRNGNNLPAPGEVVALYNQYNIRRMRL 53
BLAST of GW397259 vs. TAIR peptide
Match: AT3G57270.1 (| Symbols: BG1 | beta-1,3-glucanase 1 | chr3:21191336-21193118 REVERSE LENGTH=340) HSP 1 Score: 48.9062 bits (115), Expect = 7.733e-7 Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 3 Query: 9 FLVSLLILLVHFHI----TEAQVGVCNGQDGNNLPSSQEAVDLYKSNGIGRMRM 158 FL SL +LL F + T QVGVC G++GNNLPS E + L+K I R+R+ Sbjct: 5 FLASLTLLLGLFFVNTNPTGGQVGVCYGRNGNNLPSPAETIALFKQKNIQRVRL 58 The following BLAST results are available for this feature:
BLAST of GW397259 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot) Total hits: 2
BLAST of GW397259 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 4
BLAST of GW397259 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 2
BLAST of GW397259 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 9
BLAST of GW397259 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 6
BLAST of GW397259 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GW397259 ID=GW397259; Name=GW397259; organism=Vaccinium corymbosum; type=EST; length=159bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|