Peer-reviewed papers citing GDV
2022
- Senger, E., Osorio, S., Olbricht, K., Shaw, P., Denoyes, B., Davik, J., ... & Mezzetti, B. (2022). Towards smart and sustainable development of modern berry cultivars in Europe. The Plant Journal, 111(5), 1238-1251.
- Yang, B., Li, Y., Song, Y., Wang, X., Guo, Q., Zhou, L., ... & Zhang, C. (2022). The R2R3-MYB transcription factor VcMYB4a inhibits lignin biosynthesis in blueberry (Vaccinium corymbosum). Tree Genetics & Genomes18(3), 1-13.
- Edger, P. P., Iorizzo, M., Bassil, N. V., Benevenuto, J., Ferrão, L. F. V., Giongo, L., ... & Zalapa, J. (2022). There and back again; historical perspective and future directions for Vaccinium breeding and research studies. Horticulture Research, uhac083.
- Li, X., Zhang, X., Shi, T., Chen, M., Jia, C., Wang, J., ... & Bian, S. (2022). Identification of ARF family in blueberry and its potential involvement of fruit development and pH stress response. BMC genomics, (1), 1-17.
- Zhou, Y., Lu, L., Liu, N., Cao, H., Li, H., Gui, D., ... & Zhang, C. (2022). Analysis of MYB genes in four plant species and the detection of genes associated with drought resistance. Botany, 99(99), 1-14.
- Yang, H., Wu, Y., Duan, Y., Zhang, C., Huang, Z., Wu, W., ... & Li, W. (2022). Metabolomics combined with physiological and transcriptomic analyses reveal regulatory features associated with blueberry growth in different soilless substrates. Scientia Horticulturae, 302 111145.
- Wei, Y., Yu, N., Zhu, Y., Jia, C., Xiao, Y., Zhao, Y., ... & Sun, A. (2022). Characterization of blueberry (Vaccinium corymbosum L.) catechol oxidases III binding mechanism in response to selected substrates and inhibitors. LWT, 113142.
- Wu, C., Deng, C., Hilario, E., Albert, N. W., Lafferty, D., Grierson, E. R., ... & Chagné, D. (2022). A chromosome‐scale assembly of the bilberry genome identifies a complex locus controlling berry anthocyanin composition. Molecular Ecology Resources, 22(1), 345-360.
- Nagasaka, K., Yamane, H., Nishiyama, S., Ebihara, S., Matsuzaki, R., Shoji, M., & Tao, R. (2022). Insights into the Physiological and Molecular Mechanisms Underlying Highbush Blueberry Fruit Growth Affected by the Pollen Source. The Horticulture Journal, UTD-332.
- Li, Y., Ma, R., Li, R., Zhao, Q., Zhang, Z., Zong, Y., ... & Guo, W. (2022). Comparative Transcriptomic Analysis Provides Insight into the Key Regulatory Pathways and Differentially Expressed Genes in Blueberry Flower Bud Endo-and Ecodormancy Release. Horticulturae, 8(2), 176.
- Li, Y., Wang, X., Guo, Q., Zhang, X., Zhou, L., Zhang, Y., & Zhang, C. (2022). Conservation and Diversity of miR166 Family Members From Highbush Blueberry (Vaccinium corymbosum) and Their Potential Functions in Abiotic Stress. Frontiers in Genetics, 13.
- Zhao, R., Chen, L., Xiao, J., Guo, Y., Li, Y., Chen, W., ... & Guo, W. (2022). Functional activity analysis of plasma membrane H+-ATPase gene promoter and physiological functional identification of interactive transcription factor in blueberry. Environmental and Experimental Botany, 203, 105048.
- Kawash, J., Colt, K., Hartwick, N. T., Abramson, B. W., Vorsa, N., Polashock, J. J., & Michael, T. P. (2022). Contrasting a reference cranberry genome to a crop wild relative provides insights into adaptation, domestication, and breeding. Plos one, 17(3), e0264966.
- Chen, L., Zhao, R., Yu, J., Gu, J., Li, Y., Chen, W., & Guo, W. (2022). Functional analysis of plasma membrane H+-ATPases in response to alkaline stress in blueberry. Scientia Horticulturae, 306, 111453.
- Jiang, B., Liu, R., Fang, X., Wu, W., Han, Y., Chen, H., ... & Gao, H. (2022). Botrytis cinerea infection affects wax composition, content and gene expression in blueberry fruit. Postharvest Biology and Technology, 192, 112020.
- Mengist, M., Grace, M., Mackey, T., Munoz, B., Pucker, B., Bassil, N., ... & Iorizzo, M. (2022). Dissecting the genetic basis of bioactive metabolites and fruit quality traits in blueberries (Vaccinium corymbosum L.). Frontiers in plant science, 13.
- Montanari, S., Thomson, S., Cordiner, S., Günther, C., Miller, P., Deng, C., ... & Espley, R. (2022). High-density linkage map construction in an autotetraploid blueberry population and detection of quantitative trait loci for anthocyanin content. Frontiers in plant science, 13.
- Liu, L., Bai, N., Zheng, Y., Chen, L., Zong, Y., Ye, L., ... & Guo, W. (2022). Genome-wide identification and analysis of TIFY family in highbush blueberry and their responses to exogenous jasmonic acid. Scientia Horticulturae, 305, 111391.
- Mengist, M. F., Bostan, H., De Paola, D., Teresi, S. J., Platts, A. E., Cremona, G., ... & Iorizzo, M. (2022). Autopolyploid inheritance and a heterozygous reciprocal translocation shape chromosome genetic behavior in tetraploid blueberry (Vaccinium corymbosum). New Phytologist.
- Tian, L., Liu, L., Jiang, Y., Yang, Y., Dong, G., & Yu, H. (2022). Tobacco rattle virus-induced VcANS gene silencing in blueberry fruit. Gene, 147054.
- Rolling, W. R., Senalik, D., Iorizzo, M., Ellison, S., Van Deynze, A., & Simon, P. W. (2022). CarrotOmics: a genetics and comparative genomics database for carrot (Daucus carota). Database, 2022.
2021
- Jose, S., Abbey, J., Jaakola, L., & Percival, D. (2021). Elucidation of the molecular responses during the primary infection of wild blueberry phenotypes with Monilinia vaccinii-corymbosi under field conditions. BMC plant biology, 21(1), 1-10.
- Nguyen, C. T. T., Lee, J. H., & Tran, P. T. (2021). Accumulation of sugars and associated gene expression in highbush blueberries differ by cultivar, ripening stage, and storage temperature. Journal of Berry Research, (Preprint), 1-17.
- Wang, C., Yu, J., Wang, J., Zhang, J., Yang, L., Li, K., & Zhang, Y. (2021). Transcriptome based genetic resources from Rabbiteye and Southern Highbush blueberries. Journal of Berry Research, (Preprint), 1-13.
- Staton, M., Cannon, E., Sanderson, L. A., Wegrzyn, J., Anderson, T., Buehler, S., ... & Ficklin, S. (2021). Tripal, a community update after 10 years of supporting open source, standards-based genetic, genomic and breeding databases. Briefings in bioinformatics, 22(6), bbab238.
- Zhang, Y., Liu, F., Wang, B., Wu, H., Wu, J., Liu, J., ... & Qiu, D. (2021). Identification, Characterization and Expression Analysis of Anthocyanin Biosynthesis-related bHLH Genes in Blueberry (Vaccinium corymbosum L.). International Journal of Molecular Sciences, 22(24), 13274.
- Sultana, N., Menzel, G., Seibt, K. M., Garcia, S., Weber, B., Serçe, S., & Heitkam, T. (2021). Genome-wide analysis of long terminal repeat retrotransposons from the cranberry Vaccinium macrocarpon. Journal of Berry Research, (Preprint), 1-21.
- Wei, Y., Yu, N., Zhu, Y., Hao, J., Shi, J., Lei, Y., ... & Sun, A. (2021). Exploring the biochemical properties of three polyphenol oxidases from blueberry (Vaccinium corymbosum L.). Food Chemistry, 344, 128678.
- Diaz-Garcia, L., Garcia-Ortega, L. F., González-Rodríguez, M., Delaye, L., Iorizzo, M., & Zalapa, J. (2021). Chromosome-level genome assembly of the American cranberry (Vaccinium macrocarpon Ait.) and its wild relative Vaccinium microcarpum. Frontiers in Plant Science, 12, 137.
- Omori, M., Yamane, H., Osakabe, K., Osakabe, Y., & Tao, R. (2021). Targeted mutagenesis of CENTRORADIALIS using CRISPR/Cas9 system through the improvement of genetic transformation efficiency of tetraploid highbush blueberry. The Journal of Horticultural Science and Biotechnology, 96(2), 153-161.
- Gu, J., Xu, J., Guo, Y., Zong, Y., Chen, W., & Guo, W. (2021). Cloning and functional analysis of ZIP transporters in blueberry. Scientia Horticulturae, 278, 109871.
- Jung, S., Lee, T., Gasic, K., Campbell, B. T., Yu, J., Humann, J., ... & Main, D. (2021). The Breeding Information Management System (BIMS): an online resource for crop breeding. Database, 2021.
- Wang, A., Liang, K., Yang, S., Cao, Y., Wang, L., Zhang, M., ... & Zhang, L. (2021). Genome-wide analysis of MYB transcription factors of Vaccinium corymbosum and their positive responses to drought stress. BMC genomics, 22(1), 1-17.
- Gao, X., Wang, L., Zhang, H., Zhu, B., Lv, G., & Xiao, J. (2021). Transcriptome analysis and identification of genes associated with floral transition and fruit development in rabbiteye blueberry (Vaccinium ashei). PloS one, 16(10), e0259119.
- Cárcamo de la Concepción, M., Sargent, D. J., Šurbanovski, N., Colgan, R. J., & Moretto, M. (2021). De novo sequencing and analysis of the transcriptome of two highbush blueberry (Vaccinium corymbosum L.) cultivars ‘Bluecrop’and ‘Legacy’at harvest and following post-harvest storage. PloS one, 16(8), e0255139.
- Wu, C., Deng, C., Hilario, E., Albert, N. W., Lafferty, D., Grierson, E. R., ... & Chagné, D. (2021). A chromosome‐scale assembly of the bilberry genome identifies a complex locus controlling berry anthocyanin composition. Molecular Ecology Resources.
- Omori, M., Yamane, H., Osakabe, K., Osakabe, Y., & Tao, R. (2021). Targeted mutagenesis of CENTRORADIALIS using CRISPR/Cas9 system through the improvement of genetic transformation efficiency of tetraploid highbush blueberry. The Journal of Horticultural Science and Biotechnology, 96(2), 153-161.
- Jose, S., Abbey, J., Jaakola, L., & Percival, D. (2021). Elucidation of the molecular responses during the primary infection of wild blueberry phenotypes with Monilinia vaccinii-corymbosi under field conditions. BMC Plant Biology, 21(1), 1-10.
- Jung, S., Cheng, C. H., Buble, K., Lee, T., Humann, J., Yu, J., ... & Main, D. (2021). Tripal MegaSearch: a tool for interactive and customizable query and download of big data. Database, 2021.
- Cai, B., Vancov, T., Si, H., Yang, W., Tong, K., Chen, W., & Fang, Y. (2021). Isolation and Characterization of Endomycorrhizal Fungi Associated with Growth Promotion of Blueberry Plants. Journal of Fungi, 7(8), 584.
- Qi, X., Ogden, E. L., Bostan, H., Sargent, D. J., Ward, J., Gilbert, J., ... & Rowland, L. J. (2021). High-Density Linkage Map Construction and QTL Identification in a Diploid Blueberry Mapping Population. Frontiers in plant science, 12.
- Li, Y., An, S., Cheng, Q., Zong, Y., Chen, W., Guo, W., & Zhang, L. (2021). Analysis of Evolution, Expression and Genetic Transformation of TCP Transcription Factors in Blueberry Reveal That VcTCP18 Negatively Regulates the Release of Flower Bud Dormancy. Frontiers in Plant Science, 12.
- Xie, X., Yue, S., Shi, B., Li, H., Cui, Y., Wang, J., ... & Bian, S. (2021). Comprehensive analysis of the SBP family in blueberry and their regulatory mechanism controlling chlorophyll accumulation. Frontiers in plant science, 12, 1340.
2020
- Hou, Y., Li, H., Zhai, L., Xie, X., Li, X., & Bian, S. (2020). Identification and functional characterization of the Aux/IAA gene VcIAA27 in blueberry. Plant signaling & behavior, 15(1), 1700327.
- Sultana, N., Menzel, G., Heitkam, T., Kojima, K. K., Bao, W., & Serçe, S. (2020). Bioinformatic and Molecular Analysis of Satellite Repeat Diversity in Vaccinium Genomes. Genes, 11(5), 527.
- Jose, S., Abbey, J., Jaakola, L., & Percival, D. (2020). Selection and validation of reliable reference genes for gene expression studies from Monilinia vaccinii-corymbosi infected wild blueberry phenotypes. Scientific reports, 10(1), 1-10.
- Die, J. V., Jones, R. W., Ogden, E. L., Ehlenfeldt, M. K., & Rowland, L. J. (2020). Characterization and Analysis of Anthocyanin-Related Genes in Wild-Type Blueberry and the Pink-Fruited Mutant Cultivar ‘Pink Lemonade’: New Insights into Anthocyanin Biosynthesis. Agronomy, 10(9), 1296.
- Sultana, N., Pascual-Díaz, J. P., Gers, A., Ilga, K., Serçe, S., Vitales, D., & Garcia, S. (2020). Contribution to the knowledge of genome size evolution in edible blueberries (genus Vaccinium). Journal of Berry Research, 10(2), 243-257.
- Yu, L., Zhou, Y., Zhang, Y., Liu, W., Li, Y., Lu, M., ... & Guo, W. (2020). DNA methylation balance is involved in anthocyanin accumulation during Vaccinium corymbosum fruit ripening. Journal of Berry Research, (Preprint), 1-13.
2019
- Zhong, J., Gu, J., Guo, Y., You, S., Liao, F., Chen, W., & Guo, W. (2019). Blueberry VcLon1 protease increases iron use efficiency by alleviating chloroplast oxidative stress. Plant and Soil, 445(1-2), 533-548.
- Yang, L., Cai, K., Huang, H., Zhang, Y., Zong, Y., Wang, S., ... & Guo, W. (2019). Comparative analysis of anatomy, gene expression of Vaccinium corymbosum cyclins and cyclin dependent kinases during the flower bud and fruit ontogeny. Scientia Horticulturae, 251, 252-259.
- Wilson, A. E., & Tian, L. (2019). Phylogenomic analysis of UDP‐dependent glycosyltransferases provides insights into the evolutionary landscape of glycosylation in plant metabolism. The Plant Journal, 100(6), 1273-1288.
- Maeda, H., Akagi, T., Onoue, N., Kono, A., & Tao, R. (2019). Evolution of Lineage-Specific Gene Networks Underlying the Considerable Fruit Shape Diversity in Persimmon. Plant and Cell Physiology, 60(11), 2464-2477.
- Buble, K., Jung, S., Humann, J. L., Yu, J., Cheng, C. H., Lee, T., ... & Wegrzyn, J. L. (2019). Tripal MapViewer: A tool for interactive visualization and comparison of genetic maps. Database, 2019.
2018
- Plunkett, B. J., Espley, R. V., Dare, A. P., Warren, B. A., Grierson, E. R., Cordiner, S., ... & Schwinn, K. E. (2018). MYBA from blueberry (Vaccinium section Cyanococcus) is a subgroup 6 type R2R3MYB transcription factor that activates anthocyanin production. Frontiers in Plant Science, 9, 1300.
- Yang, L., Chen, M., Cai, K., Zhang, L., Zhu, Y., Ye, Q., ... & Guo, W. (2018). VcFAS, VcSUN and VcOVATE orchestrated the fruit morphogenesis in southern highbush blueberry during the pre-anthesis and fruit development. Scientia Horticulturae, 240, 109-115.
- Song, G. Q., & Chen, Q. (2018). Overexpression of the MADS-box gene K-domain increases the yield potential of blueberry. Plant Science, 276, 22-31.
- Song, G. Q., & Walworth, A. (2018). An invaluable transgenic blueberry for studying chilling-induced flowering in woody plants. BMC plant biology, 18(1), 265.
- Campa, A., & Ferreira, J. J. (2018). Genetic diversity assessed by genotyping by sequencing (GBS) and for phenological traits in blueberry cultivars. PloS one, 13(10).
- Die, J. V., Román, B., Qi, X., & Rowland, L. J. (2018). Genome-scale examination of NBS-encoding genes in blueberry. Scientific reports, 8(1), 1-11.
2017
- Jung, S., Lee, T., Cheng, C. H., Ficklin, S., Yu, J., Humann, J., & Main, D. (2017). Extension modules for storage, visualization and querying of genomic, genetic and breeding data in Tripal databases. Database, 2017.
2016
- Walworth, A. E., Chai, B., & Song, G. Q. (2016). Transcript profile of flowering regulatory genes in VcFT-overexpressing blueberry plants. PLoS one, 11(6).
2014
- Rowland, L. J., Ogden, E. L., Bassil, N., Buck, E. J., McCallum, S., Graham, J., ... & Vinyard, B. T. (2014). Construction of a genetic linkage map of an interspecific diploid blueberry population and identification of QTL for chilling requirement and cold hardiness. Molecular breeding, 34(4), 2033-2048.
2013
- Die, J. V., & Rowland, L. J. (2013). Advent of genomics in blueberry. Molecular breeding, 32(3), 493-504.
- Song, G. Q., Walworth, A., Zhao, D., Jiang, N., & Hancock, J. F. (2013). The Vaccinium corymbosum FLOWERING LOCUS T-like gene (VcFT): a flowering activator reverses photoperiodic and chilling requirements in blueberry. Plant cell reports, 32(11), 1759-1769.
- Song, G. Q., Walworth, A., Zhao, D., Hildebrandt, B., & Leasia, M. (2013). Constitutive expression of the K-domain of a Vaccinium corymbosumSOC1-like (VcSOC1-K) MADS-box gene is sufficient to promote flowering in tobacco. Plant cell reports, 32(11), 1819-1826.
- Sanderson, L. A., Ficklin, S. P., Cheng, C. H., Jung, S., Feltus, F. A., Bett, K. E., & Main, D. (2013). Tripal v1. 1: a standards-based toolkit for construction of online genetic and genomic databases. Database, 2013.
2012
- Rowland, L. J., Alkharouf, N., Darwish, O., Ogden, E. L., Polashock, J. J., Bassil, N. V., & Main, D. (2012). Generation and analysis of blueberry transcriptome sequences from leaves, developing fruit, and flower buds from cold acclimation through deacclimation. BMC plant biology, 12(1), 46.
- Wegrzyn, J. L., Main, D., Figueroa, B., Choi, M., Yu, J., Neale, D. B., ... & Ficklin, S. (2012). Uniform standards for genome databases in forest and fruit trees. Tree genetics & genomes, 8(3), 549-557.
2011
- Ficklin, S. P., Sanderson, L. A., Cheng, C. H., Staton, M. E., Lee, T., Cho, I. H., ... & Main, D. (2011). Tripal: a construction toolkit for online genome databases. Database, 2011.
- Jung, S., Menda, N., Redmond, S., Buels, R. M., Friesen, M., Bendana, Y., ... & Bett, K. E. (2011). The chado natural diversity module: a new generic database schema for large-scale phenotyping and genotyping data. Database, 2011.