Work Completed

  • V. darrowii Camp genome added to database, JBrowse, Blast PathwayCyc (12/8/2022)
  • 4 new blueberry (Duke, Earlie Blue, Elliot, W85-20 P0, W85-20 P1) and 3 new cranberry genomes (Budd's Blues, Garwood Bell, Native Budd's Blues) added to Synteny Viewer (11/1/2022)
  • 3 new blueberry (Duke, Earlie Blue, Elliot) and 3 new cranberry genomes (Budd's Blues, Garwood Bell, Native Budd's Blues) added to PathwayCyc (11/1/2022)
  • October 2022 GDV Newsletter sent (10/31/2022)
  • MegaSearch Ortholog/Paralog search added (10/28/2022)
  • 188 QTL (Mengist et al); 168 QTL, 18195 markers, 1 map (Montanari et al) added Sept. 2022.
  • Vaccinium Pangenome genomes (22 blueberry, 10 cranberry) added to GDV (9/6/2022)
  • Monthly email archive page added (7/27/2022).  Link to all monthly emails will be here.
  • July 2022 GDV newsletter sent (7/26/2022)
  • Ortholog/Paralog search added (4/5/2022)
  • Monthly GDV email with Marker Search video (3/24/2022)
  • Added V. caesariense clone W85-20 genome to chado, PathwayCyc, BLAST, JBrowse (3/15/22)
  • Sent monthly email, MapViewer Pt. 1 (2/24/22)
  • Sent 2nd issue of newsletter (1/28/22)
  • New Blueberry data added: map (1), QTL (40), markers (17433) (9/13/2021)
  • Added "Newsletter" page and sent first issue to email list and shared on Twitter (9/9/21)
  • Added 12th IVS videos to "Presentations" page, updated IVS news item to include links to videos (9/2/21)
  • V. darrowii v1.2 and v2.4, V. macrocarpon cv. Ben Lear, and V. oxycoccos genomes added to Synteny Viewer (8/31/2021)
  • V. macrocarpon Ben Lear and V. oxycoccos NJ96-20 genomes added to GDV, BLAST, JBrowse, PathwayCyc (8/25/2021)
  • Added "Presentations" page with webinar recordings (8/25/2021
  • New blueberry data added: markers (17,486), map (1), QTL (15), trait (1) (7/20/2021)
  • V. darrowii v1.2 primary haplotype added to PathwayCyc (7/14/2021)
  • V. darrowii genome, primary and secondary haplotype assemblies, added to GDV (7/1/2021)
  • Updated Vaccinium NCBI gene and mRNA data, added 1296 new sequences (5/28/2021)
  • Blueberry Transcriptome (2019) aligned to genomes and added a JBrowse track, also added to BLAST tool (4/22/2021)
  • Functional annotations of Cranberry and Blueberry (2019) Transcriptomes added to chado (4/20/2021)
  • 2019 Blueberry transcriptome added to GDV (4/12/2021)
  • New Blueberry data added: markers (11) (4/13/2021)
  • V. myrtillus NK2018 genome added to Synteny Viewer (4/6/2021)
  • V. myrtillus NK2018 PathwayCyc added (3/25/2021)
  • V. myrtillus NK2018 genome added (3/19/2021)
  • New Blueberry data added: markers (4) (3/17/2021)
  • V. microcarpum PathwayCyc added (2/24/2021)
  • Synteny Viewer tool with Blueberry and 2 Cranberry genomes added (2/15/2021)
  • Protein sequences loaded into Chado for Draper genome and 2 cranberry genomes (2/9/2021)
  • New blueberry data added: markers (11,292), map (1), QTL (5), traits (4) (1/29/2021)
  • Transcript alignments added to V. macrocarpon and V. microcarpum JBrowse (1/8/2021)
  • V. macrocarpon PathwayCyc added, and Smart Tables/user accounts for PathwayTools enabled (1/5/2021)
  • Two Cranberry genomes (V. macrocarpon and V. microcarpum) added (11/20/2020)
  • Transcript alignments added to Draper genome (7/7/2020)
  • New data added: genetic maps (6), genetic markers (73,915) (5/14/2020)
  • Blueberry PathwayCyc added (1/29/2020)
  • GDV converted to Tripal 3 (10/9/19)
  • Added SwissProt homology data to Chado for W8520 draft blueberry genome (8/6/19)
  • Expression data for genes of Draper genome added (8/5/19)
  • BLAST and InterProScan Homology data for Draper genome added (7/30/19)
  • V. corymbosum cv. Draper v1.0 genome added to GDV, genome imported into database and added to JBrowse and BLAST+ (7/19/2019)
  • JBrowse updated to v1.16.4 (6/4/2019)
  • MegaSearch added (6/4/2019)
  • New data added: QTL (325), agronomic traits (6) (4/23/2019)
  • New data added: germplasm (9), genetic maps (15), genetic markers (11,726), QTL (171), agronomic traits (8) (8/2018 to 4/2019)
  • Dot plot, Correspondence matrix and PNG export functionality added for MapViewer, available (August 2018)
  • GRIN phenotype data added to BIMS and can be searched using BIMS (July 2018)
  • MapViewer updated with dynamic drawing element positioning for QTLs and Correspondences (June 2018)
  • Tripal Analysis Expression module added and 2 blueberry expression datasets were loaded to GDV (May 2018)
  • GDV User Manual completed (February 2018)
  • Added V. corymbosum genome (May 2013 version) to database, JBrowse, BLAST (November 2017)
  • Database interface/functionality upgraded (June 2017)
  • MapViewer module added to database (June 2017)
  • New Tripal BLAST+ module added and searchable databases updated (June 2017)
  • Published blueberry and cranberry marker, map, and QTL data added to database.  Published bilberry marker data added. (June 2017)
  • V. corymbosum RefTrans v1 added (May 2017)