Publication Datasets

GDV Accession  Reference Data File(s)
GDV21004 Yu, J., Hulse-Kemp, A.M., Babiker, E., Staton, M. High-quality reference genome and annotation aids understanding of berry development for evergreen blueberry (Vaccinium darrowii). Horticulture Research 8, 228 (2021). Corresponding author: Meg Staton (mstaton1@utk.edu) V. darrowii  NJ8810/NJ8807 genome, secondary haplotype
GDV21003 Yu, J., Hulse-Kemp, A.M., Babiker, E., Staton, M. High-quality reference genome and annotation aids understanding of berry development for evergreen blueberry (Vaccinium darrowii). Horticulture Research 8, 228 (2021). Corresponding author: Meg Staton (mstaton1@utk.edu) V. darrowii  NJ8810/NJ8807 genome, primary haplotype
GDV21002

Joe Kawash, Kelly Colt, Nolan Hartwick, Brad Abramson, Nick Vorsa, James Polashock, Todd P. Michael.  2021.  Contrasting a reference cranberry genome to a crop wild relative provides insights into adaptation, domestication, and breeding. Submitted. Corresponding author: James Polashock (james.polashock@usda.gov)

V. oxycoccos NJ96-20 genome
GDV21001 Joe Kawash, Kelly Colt, Nolan Hartwick, Brad Abramson, Nick Vorsa, James Polashock, Todd P. Michael.  2021.  Contrasting a reference cranberry genome to a crop wild relative provides insights into adaptation, domestication, and breeding. Submitted. Corresponding author: James Polashock (james.polashock@usda.gov) V. macrocarpon cv. Ben Lear genome
GDV20002 Diaz-Garcia L, Garcia-Ortega LF, Rodriguez MG, Delaye L, Iorizzo M, Zalapa J. 2021. Chromosome-level genome assembly of the American cranberry (Vaccinium macrocarpon Ait.) and its wild relative Vaccinium microcarpum.  Frontiers in Plant Science. 12:633310.  Corresponding authors: Juan Zalapa (jezalapa@wisc.edu) and Luis Diaz-Garcia (diazgarcia@wisc.edu) V. microcarpum v1 genome
GDV20001 Diaz-Garcia L, Garcia-Ortega LF, Rodriguez MG, Delaye L, Iorizzo M, Zalapa J. 2021. Chromosome-level genome assembly of the American cranberry (Vaccinium macrocarpon Ait.) and its wild relative Vaccinium microcarpum.   Frontiers in Plant Science. 12:633310.   Corresponding authors: Juan Zalapa (jezalapa@wisc.edu) and Luis Diaz-Garcia (diazgarcia@wisc.edu) V. macrocarpon cv. Stevens v1 genome
GDV19002

Nusrat Sultana, Gerhard Menzel, Kathrin M. Seibt, Sònia Garcia, Beatrice Weber, Sedat Serçe, and Tony Heitkam. Genome-wide analysis of long terminal repeat retrotransposons from the cranberry Vaccinium macrocarpon. Submitted to Journal of Berry Research (ISSN print 1878-5093, ISSN online 1878-5123). Corresponding author:  Nusrat Sultana (nusrat_cyto.du@yahoo.com)

Description

Link to files on GDV-FTP

GDV19001

Nusrat Sultana, Gerhard Menzel, Tony Heitkam, Kenji K. Kojima, Weidong Bao, and Sedat Serçe.  Bioinformatic and Molecular Analysis of Satellite Repeat Diversity in Vaccinium genomes. Genes. 2020, 11(5): 527.  Corresponding Author: Nusrat Sultana (nusrat.bot@gmail.com

Description

Link to files on GDV-FTP