vm27120, vm27120 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm27120
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(CA)11
Primer 1	vm27120.forward primer: AAGGTCTAAGAGTTATACCGCA
Primer 2	vm27120.reverse primer: GGGCATAAGTTAAGAGAGCTAA
Product Length	256
Max Length	269
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr06	supercontig	Vmac_chr06:26695008..26695244 .
chr6	supercontig	chr6:12629237..12629471 .

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG6	N/A	41.9	vm27120	View
2	Cranberry-Mullica_Queen-2007	LG6	N/A	52.5	vm27120	View
3	Cranberry-CNJ02-1-2017	LG06	N/A	40.1	vm27120	View
4	Cranberry-Mullica_Queen-2017	LG06	N/A	45.5	vm27120	View
5	Cranberry-[BG//BL/BN]95-F1	LG06	N/A	68.31	vm27120	View
6	Cranberry-Composite_map-F1	LG06	N/A	55.34	vm27120	View
7	Cranberry-GH1/35-F1	LG06	N/A	53.76	vm27120	View
8	Cranberry-Mullica_Queen_1-F1	LG06	N/A	57.89	vm27120	View
9	Cranberry-BB/CQ-F1	LG05	N/A	51.36	vm27120	View