vm38401, vm38401 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm38401
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(CA)17
Primer 1	vm38401.forward primer: CAATGGGAAGTACAAAGAGC
Primer 2	vm38401.reverse primer: CGATGCAATCTTAGTCTTGA
Product Length	174
Max Length	201
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr10	supercontig	Vmac_chr10:204264..204412 .
chr10	supercontig	chr10:190107..190279 .

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG10	N/A	2.16	vm38401	View
2	Cranberry-Crimson_Queen-2007	LG10	N/A	0	vm38401	View
3	Cranberry-BB/CQ-F1	LG12	N/A	0	vm38401	View
4	Cranberry-CNJ02-1-2017	LG10	N/A	0.9	vm38401	View
5	Cranberry-Crimson_Queen-2017	LG10	N/A	0	vm38401	View
6	Cranberry-[BG//BL/BN]95-F1	LG10	N/A	78.94	vm38401	View
7	Cranberry-Composite_map-F1	LG10	N/A	77.28	vm38401	View
8	Cranberry-Crimson_Queen-F1	LG10	N/A	76.31	vm38401	View
9	Cranberry-Stevens-F1	LG10	N/A	75.1	vm38401	View
10	Cranberry-BB/CQ-F1	LG12	N/A	77.11	vm38401	View