vm50753, vm50753 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm50753
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TTC)7
Primer 1	vm50753.forward primer: CCTTCTAGCAGTTTCTTCATTC
Primer 2	vm50753.reverse primer: AAGTTCTAAAGCTGTGAAGGAC
Product Length	251
Max Length	255
Publication	[view all]

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr02	supercontig	Vcev1_p0.Chr02:52278631..52278850 .
scaffold00119	supercontig	scaffold00119:314161..314380 .
chr2_H1	supercontig	chr2_H1:45777666..45777885 .
Vmac_chr01	supercontig	Vmac_chr01:39454184..39454406 .
chr1	supercontig	chr1:10867268..10867490 .
Chr02	supercontig	Chr02:36800841..36801060 .
Chr02_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr02_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:44159230..44159449 .
Chr02_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr02_Vaccinium_vitis-idaea_ssp_minus:41263259..41263478 .