GVC-C428 | GDV

Marker Overview

Marker Overview


Name	GVC-C428
Genbank ID	N/A
Type	SSR
Species	Vaccinium spp.
Repeat Motif	(AAC)4
Primer 1	GVC-C428.Forward: TTGGCCAGAACAACCAAAGT
Primer 2	GVC-C428.Reverse: CGTCGTGTTCCTCTTGTTCA
Publication	[view all]
Contact	Nahla Bassil

Contact

Name

Details

Nahla Bassil

First name:	Nahla
Last name:	Bassil
Institution:	USDA-ARS
Country:	United States
Email:	nahla.bassil@usda.gov
Last update:	Jan 2020

Publications


Year	Publication
2020	Bassil N, Bidani A, Nyberg A, Hummer K, Rowland LJ. Microsatellite markers confirm identity of blueberry (Vaccinium spp.) plants in the USDA-ARS National Clonal Germplasm Repository collection. Genet Resour Crop Evol. 2020 (67):393-409.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr01	supercontig	Vcev1_p0.Chr01:52977640..52977885 .
scaffold00040	supercontig	scaffold00040:223771..224016 .
chr1_H1	supercontig	chr1_H1:46680994..46681245 .
Vmac_chr06	supercontig	Vmac_chr06:35194104..35194347 .
chr6	supercontig	chr6:4439234..4439474 .
Chr01	supercontig	Chr01:4690887..4691135 .
Chr01_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr01_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:4619344..4619589 .
Chr01_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr01_Vaccinium_vitis-idaea_ssp_minus:4695023..4695268 .