Vaccinium_corymbosum_v1_Contig1

Contig Overview
NameVaccinium_corymbosum_v1_Contig1
Unique NameVaccinium_corymbosum_v1_Contig1
Typecontig
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length296
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO762514HO762514Vaccinium corymbosumEST
HO762516HO762516Vaccinium corymbosumEST


Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
HO762514ESTHO762514:1..189 +
HO762516ESTHO762516:1..296 +
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 39..59
score
NoneNo IPR availableSEGsegsegcoord: 33..55
score

Sequences
The following sequences are available for this feature:

contig sequence

>Vaccinium_corymbosum_v1_Contig1 ID=Vaccinium_corymbosum_v1_Contig1; Name=Vaccinium_corymbosum_v1_Contig1; organism=Vaccinium corymbosum; type=contig; length=296bp
ACCATAACAATGTTGTTGTGGTGAATAATTTGTCTCTCAATTTCGTTCCT
GTTTTTTTCAGAATTTGAGTAAAATGTGAGTGTCAATCGTGTATGTGTCT
GTGTTTGTGTCTGTGTCGTGTCTCCTTCCGTCTGTGTAACGGTCACTCTG
TGACCATGTTGTGTGTTTATAAAATGGACTACTATTAGTGTGATTCTCCA
CATGACAGGGATATGGTTTATGTTTGTGGGCGGTGCAAATTATATACACT
TAGAAGGCTCCAGAAACTTATAATTTTTTGCTACTTTGCGCCCAAT
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated