Vaccinium_corymbosum_v1_Contig11

Contig Overview
NameVaccinium_corymbosum_v1_Contig11
Unique NameVaccinium_corymbosum_v1_Contig11
Typecontig
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length921
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
EG026119EG026119Vaccinium corymbosumEST
EG026053EG026053Vaccinium corymbosumEST


Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
EG026119ESTEG026119:1..921 +
EG026053ESTEG026053:1..921 +
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 6..13
score: NAcoord: 17..39
score
NoneNo IPR availableSEGsegsegcoord: 4..21
score: NAcoord: 30..37
score: NAcoord: 76..88
score
NoneNo IPR availableSEGsegsegcoord: 21..32
score
NoneNo IPR availableSEGsegsegcoord: 31..48
score
NoneNo IPR availableSEGsegsegcoord: 6..21
score
NoneNo IPR availableSEGsegsegcoord: 43..58
score
NoneNo IPR availableSEGsegsegcoord: 17..28
score
NoneNo IPR availableSEGsegsegcoord: 32..43
score

Sequences
The following sequences are available for this feature:

contig sequence

>Vaccinium_corymbosum_v1_Contig11 ID=Vaccinium_corymbosum_v1_Contig11; Name=Vaccinium_corymbosum_v1_Contig11; organism=Vaccinium corymbosum; type=contig; length=921bp
GATCATTTNTATACTTCTCTCTTACATTCTTTATTATNATTTGTGTCGAT
CCTTATTTGTTTACCTCTATGTCAATTGTTGTTATCTCACACACTCTTGA
TCACTNTGCTTTGTCTTCCTCTATTTATTTGCACTGTTCTGTTGTCTCTT
GTCTATCACTGAGTGTTCCATGTNGTTTCACCCTGTTCACTTACTTCTGT
CTGTGTTACATCAACTTGCACACTAATCTCATTCCCCCATATCTTTGTAT
GTACTCTNTGTACTCTGTTGTTATCCTATTGNACCATTTACCCTGTTTCA
ATTGTTTCCTGCTTCCCTCCATGTCCTTCTCGTTCTAACATTGCTTCCAT
CAGTTTTGACAGTCACTNTTGCACACTAATNTGCTTTACACCTCCTTCCC
CAAACCCAACCTTNTACCCCACCTATATCTAACAGCCTTTTCTTTTTCGC
CTTATAATATTTTGTACCAGTTCATCCTATATATTCCCGTTAGTGTTACA
TATCTACTCCGTTTTAACTTTATTACAAACGCCCCACCTTCCAAAACATT
GCCCCATTTAACATTAGGCTAACACTCCCCCCTCCGATTCACCCGTTTTA
AAATTTGGCACCCTATCTCTANTTATTCCTGTTGTGTAATTCTTTCTTTT
TTTACCTTTTTTTAAACCCTACCTTCATTGCAATTTTCCCTTTGGCTTCC
GTTAAATCTCGGCTTTCCATTTTTTTTTGTGTCAAACTCTTTTTGCTTCA
AGACCCTNCCATATAACAACAGGNTTCTTTTTCATNAAGGGGCCAACCTT
TGCTTTGGTTTCCCCGTTCCCAGTCAATTGCCCCAGCTTTTTGGAACATT
TTTGGTTTTGGGGGTTAATTTCGCAAAATTTCCGCAAGCTTTTTCAGGGG
TTTAAATAAATTAANNGGGAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated