Vaccinium_corymbosum_v1_Contig12

Contig Overview
NameVaccinium_corymbosum_v1_Contig12
Unique NameVaccinium_corymbosum_v1_Contig12
Typecontig
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length1090
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
EG026108EG026108Vaccinium corymbosumEST
EG026085EG026085Vaccinium corymbosumEST


Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
EG026108ESTEG026108:1..1090 +
EG026085ESTEG026085:1..1090 +
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 12..25
score: NAcoord: 29..39
score
NoneNo IPR availableSEGsegsegcoord: 26..40
score

Sequences
The following sequences are available for this feature:

contig sequence

>Vaccinium_corymbosum_v1_Contig12 ID=Vaccinium_corymbosum_v1_Contig12; Name=Vaccinium_corymbosum_v1_Contig12; organism=Vaccinium corymbosum; type=contig; length=1090bp
AAGCTGTTGTGTCGCGTGCCGTAGTGGTACATCTGTCGTNTTTGTATATC
TCTATCTTGTCTTTTATCTTCTTGTCTGTTNTGTACATACCACACATAGA
CATATGACNCACATGTNCGCNTTNAGNTATTCACACATCTTGGACTATTA
GTCTATCCATGTGCGTNTCGTAAATAGCCCTATCCTGACCATATATACAT
CCATATCGTATATGCACTTATACCACCATCCTCTCACTATACATGTACAG
CTTAGCACTAACACATNTNTGACATCTCACCCTACATGTCTGATCCAGCA
TTTACACAAAGCTGGCGGTTCACATACAAAGTAGAATAGTAATNTTCACA
CCCATGCACCTATACACCTTCTCGACAGANCTAGAATTTATCCCAAGCAA
AGTTCTCCACANAGCCTGTGTGCNTATTTACTCTCTATACATGTNCNTGA
GCCATAAACCCAAAACGTGTATTGTGTGTGAGCTCCCCACGCTTTCCCTC
GACTNTTCGCCAGCTCNCGTATGTGTCTCAACGTGATTCTAAGCATTCCN
GAACNCGTTGAATATCGAACACGGATTTGGCGCTGCGGTGGAATATCCAC
TTGTGTGCTCGTGAGCCCCCCCCGATGAGCCCCCTCCACATTTTTTTTAA
TTNCTGTAAAAAAATCCTCCCGGTTCAAAGAAAGGCCTGCAAGGAACGAA
ATATTTTACCTTAGCAACCGGTGTCCCTACTGTGAACACTGGGGTACTAA
CCGGGCGTGGGCAGAGGGGCCGGGGTACACCTTCGGAGTAAGGCGCGGGT
TTTTCCGTAACGCGGGTGGGTCTGTGGGGAACCTTAAGCCCCCATTTCGG
CATCACAGCAGGTTCCTTTGTTTTGGACCTCCCACATTTCAGAACCTTTT
TTTGGATTACGCCCTAACAGGGTTTCCCGAAGCCCCCCTCGGAAAAAAGC
TCCCCCCGGTAAACCCTATTAACCCGGGGGTTCTTCTGTTTTTTCTTGAA
ATTGGCCACCAAAAATAGCTCATTNGGGAAATCAANTCCTTTCCCTTGGC
CCTTAAAGACCCTTGCCTTTTCCTTCTTGCCTTTCTGGGA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated