Vaccinium_corymbosum_v1_Contig13

Contig Overview
NameVaccinium_corymbosum_v1_Contig13
Unique NameVaccinium_corymbosum_v1_Contig13
Typecontig
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length767
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
EG026103EG026103Vaccinium corymbosumEST
EG026043EG026043Vaccinium corymbosumEST


Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
EG026103ESTEG026103:1..767 +
EG026043ESTEG026043:1..767 +
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 18..56
score
NoneNo IPR availableSEGsegsegcoord: 16..29
score: NAcoord: 38..51
score: NAcoord: 56..90
score
NoneNo IPR availableSEGsegsegcoord: 29..45
score: NAcoord: 54..66
score
NoneNo IPR availableSEGsegsegcoord: 38..60
score
NoneNo IPR availableSEGsegsegcoord: 2..13
score: NAcoord: 24..42
score
NoneNo IPR availableSEGsegsegcoord: 35..47
score
NoneNo IPR availableSEGsegsegcoord: 2..14
score
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 6
NoneNo IPR availableSEGsegsegcoord: 4..14
score: NAcoord: 26..63
score

Sequences
The following sequences are available for this feature:

contig sequence

>Vaccinium_corymbosum_v1_Contig13 ID=Vaccinium_corymbosum_v1_Contig13; Name=Vaccinium_corymbosum_v1_Contig13; organism=Vaccinium corymbosum; type=contig; length=767bp
ACTCAGNAATTAACACCCTACACTAAAGGGACTAGCTACACTGACAGGTT
TAAAACCGAATTACGACACACTTAGACGTGGTACGACGGACACGAGGTAA
CGACGGGGGACTACACTAAGCACTGCCTTTGACTTTACACGNTCTACACT
ACTCTACTTACTTANTACACCCAACACTACACGACTACAGACTTACTGCG
ACGCTTACCAACTATACACAACACTGACTACCTTACACACCTACTATACA
ACTTTTGACTTTTACACGNTAAGACGNTTTGCGNTGCGACCACGCACACA
ACGAACACGAACACCGACCTGGACTTTGAACCTTGNTAATTACCCTACCA
CACCGCCACCTTGGACCCTTTAAATTATCGGNGAANAAAAACTACCGNGG
TTTTNTNTGGGACACANAACACGCACCTACACACATTTGGACACACCACG
CGACCTCCCCACCCCGCGCNACCACCGCCCCTCCTCCCCCCCCCCACCCC
ACCCCACATATTCGGCAAATTTTCGTTATAACACGAAAAAACCACCAACA
GAAAAAAAAGCCAAACCACCCTTCTCATTTATCCACATCTAATTGTTCGG
CGTGCTGCTGAGAGTTTATAACGAGACACACAGGCGGGGGGGGACGCCGG
GGGAGTGTGGTTTAAAACAAACTCCGCGTTTCCAAAAACAACCCAACCCG
CNGGGGCGCAACACCACACCCCACTGAAAGGGGGGGGCAAAAAAAAACGA
AACACCAACANGGGGTT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated