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Contig Overview
Name | Vaccinium_corymbosum_v1_Contig14 |
Unique Name | Vaccinium_corymbosum_v1_Contig14 |
Type | contig |
Organism | Vaccinium corymbosum (northern highbush blueberry) |
Sequence length | 844 |
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
EG026089 | EST | EG026089:1..844 + |
EG026102 | EST | EG026102:1..844 + |
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | SEG | seg | seg | coord: 25..41 score: NAcoord: 45..62 score: NAcoord: 78..95 score: NAcoord: 100..113 score: NAcoord: 130..148 score |
None | No IPR available | SEG | seg | seg | coord: 2..25 score: NAcoord: 37..77 score |
None | No IPR available | SEG | seg | seg | coord: 51..61 score |
None | No IPR available | SEG | seg | seg | coord: 42..55 score |
None | No IPR available | SEG | seg | seg | coord: 31..51 score |
None | No IPR available | SEG | seg | seg | coord: 32..48 score |
Sequences
The
following sequences are available for this feature:
contig sequence >Vaccinium_corymbosum_v1_Contig14 ID=Vaccinium_corymbosum_v1_Contig14; Name=Vaccinium_corymbosum_v1_Contig14; organism=Vaccinium corymbosum; type=contig; length=844bp ACTCAATNTTATTCTCTGCTCATATTTCNACTGTTTTATCATTCATTGTT GTTTGTAACTTNTATTTTCTTCCCCGTTTGTCTCCATTGTTGTTTTCTTT AAATCATTCTTGTTAACTATTTTTCTATGTCTCTTCTTCTNTNTNCATGT TCCTGTTTTGGGCTCTCATAGTTCTTAGATTGTTCTTCTTGTACACTTGT TGTGTTTTACCTTTTTCTTCTTATTGCTTTTGTTTNGTTTTGTTNATNCT CTTNGCTGNTGGTCTTACGTNTTANCTCCTCTGTACTCCTCCGTCATGNG TGCTNCTCCCTCATACTCCTCTTGCTGCTCACTANTTCTAGTACATNGTN TTCACTGGTTATACCTCCTTCTCAACTATATTATCTTCNTCTTAATTCAA ATCCTCATCCGTTGATNCAATTATTACTGTTTGGTTTCTTTCTACACCCT TTCTTCTATTTGGTGCGCTATACGTATTTTNCAGATTCTTCTTATTNATT ATTTTATTATCATATTTCTTTCTCTCCTCTTCTCTATCTTATTTTCTATG ATGATGTGATCATCCTGATACTTCTTTTTTCTTTCTCTNTCTCCTTAATA TTATTTTCCCTCCTCAACCCCACTAAATAATAAAGGANTGGCTTCTCCTN CGGTCCTGATAAATAATTATTATTGTTGTNTGGTCTTTGATTCATATATA AATATCTTTATTGATNAATCATTTCTTTNTCTCTCAATAAGCGACTGCCT CTNTNANTATTATTTTCTTCTTATTCTGTATCACTCCTTTTCTTAATTTT AATATTTAACCGCCACAGGTCTCNTTACCATACCACTATTNTGT back to top
Annotated Terms
The
following terms have been associated with
this contig:
Vocabulary: INTERPRO
Term | Definition |
noIPR | unintegrated |
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