Vaccinium_corymbosum_v1_Contig16

Contig Overview


Name	Vaccinium_corymbosum_v1_Contig16
Unique Name	Vaccinium_corymbosum_v1_Contig16
Type	contig
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	612

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
EG026095	EG026095	Vaccinium corymbosum	EST
DW043029	DW043029	Vaccinium corymbosum	EST

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
EG026095	EST	EG026095:1..612 +
DW043029	EST	DW043029:1..612 +

Homology

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s03320.1 ()

HSP 1 Score: 139.813 bits (351), Expect = 1.054e-35
Identity = 67/112 (59.82%), Postives = 83/112 (74.11%), Query Frame = -1

Query:  202 YVKNVPANQSF*VGAAQYSEFFNLHLVQYDTGFPHLGQMSRTRASLSYRT---PIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 528
            YV+++PANQSF +      +  +   +QYD GFP +GQM RT+ASL Y+    P+M P C+ G NQ SRDA Y+QWP++AMMYA SYEQFRHA FQAP+ QQPLSFDYSQNH
Sbjct:  276 YVRSLPANQSFSLTPFNMQKIPH-PFMQYDAGFPQMGQMPRTQASLGYQPAAGPVMSPFCALGSNQTSRDAAYVQWPSAAMMYAHSYEQFRHAAFQAPFCQQPLSFDYSQNH 386

HSP 2 Score: 28.1054 bits (61), Expect = 1.054e-35
Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = -3

Query:  530 FQNRGKDRVDRDYDRSNKR 586
            F++R KDR D DYDRS  R
Sbjct:  257 FRDREKDRTDPDYDRSYDR 275

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0016s03230.1 ()

HSP 1 Score: 135.961 bits (341), Expect = 8.756e-35
Identity = 66/112 (58.93%), Postives = 80/112 (71.43%), Query Frame = -1

Query:  202 YVKNVPANQSF*VGAAQYSEFFNLHLVQYDTGFPHLGQMSRTRASLSYR---TPIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 528
            YV+++PANQSF +      +   +  +QYD  FP LGQM RT+ASL Y     P M P C+ G NQ SRDA Y+QWP++AMMYA SY+QFRHA FQAP+ QQPLSFDYSQNH
Sbjct:  206 YVRSLPANQSFSLTPFNMQKI-PIPYMQYDPSFPQLGQMPRTQASLGYHPAANPAMSPFCAMGSNQTSRDAAYVQWPSTAMMYAHSYDQFRHATFQAPFCQQPLSFDYSQNH 316

HSP 2 Score: 28.8758 bits (63), Expect = 8.756e-35
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = -3

Query:  530 FQNRGKDRVDRDYDRSNKR 586
            F++R KDR D DYDRS +R
Sbjct:  187 FRDREKDRTDPDYDRSYER 205

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. P. persica 1.0 peptide
Match: ppa007799m ()

HSP 1 Score: 118.627 bits (296), Expect = 8.933e-30
Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = -1

Query:  202 YVKNVPANQSF*VGAAQYSEFFNLHLVQYDTGFPHLGQMSRTRASLSY---RTPIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 528
            YV+++P NQ F +      +      VQYDT F    QM R +AS+SY    +P M P C+ GFNQ  RDA YMQWP++AMMY+ SY+QFR AV QAP+ Q PLSFDYSQNH
Sbjct:  248 YVRSLPTNQRFNLAPVNMQKL-QPQFVQYDTVF---SQMPRAQASISYGPPSSPAMSPFCAMGFNQTYRDATYMQWPSAAMMYSHSYDQFRQAVIQAPFCQHPLSFDYSQNH 355

HSP 2 Score: 28.8758 bits (63), Expect = 8.933e-30
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = -3

Query:  530 FQNRGKDRVDRDYDRSNKR 586
            F++R KDR D DYDRS +R
Sbjct:  229 FRDREKDRTDPDYDRSYER 247

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
Match: A5AMT9|A5AMT9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007445 PE=4 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.012e-36
Identity = 73/111 (65.77%), Postives = 85/111 (76.58%), Query Frame = -1

Query:  202 YVKNVPANQSF*VGAAQYSEFFNLHLVQYDTGFPHLGQMSRTRASLSYR--TPIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 528
            YV+N+P NQSF +      +  +  L QYDTGFP LGQ+ RT+ASLSYR   PIM P C+ G NQ SRDAVY+QWP+ +MMYA SYEQFRHAVFQAP+ QQPLSFDYSQNH
Sbjct:  247 YVRNLPTNQSFSLAPFDAQKIQHPFL-QYDTGFPQLGQIQRTQASLSYRPSNPIMNPFCAMGLNQTSRDAVYLQWPSHSMMYAHSYEQFRHAVFQAPFCQQPLSFDYSQNH 356

HSP 2 Score: 28.8758 bits (63), Expect = 1.012e-36
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = -3

Query:  530 FQNRGKDRVDRDYDRSNKR 586
            F++R KDR D DYDRS +R
Sbjct:  228 FRDREKDRTDPDYDRSYER 246

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
Match: B9S6G5|B9S6G5_RICCO (R3h domain containing protein, putative OS=Ricinus communis GN=RCOM_0536310 PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.789e-34
Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = -1

Query:  202 YVKNVPANQSF*VGAAQYSEFFNLHLVQYDTGFPHLGQMSRTRASLSYR---TPIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 528
            Y++++P NQSF +      +   L  + YDTGFP LGQM RT+ SLSY+   +P+M P C+ G NQ SRD  Y+QWP+++MMYA SYEQFRHAVFQAP+ QQPLSF+YSQNH
Sbjct:  239 YIRSLPTNQSFNLAPLNMQKI-QLPFIPYDTGFPQLGQMPRTQNSLSYQPAASPVMSPFCAVGSNQTSRDPAYVQWPSASMMYAHSYEQFRHAVFQAPFCQQPLSFEYSQNH 349

HSP 2 Score: 28.1054 bits (61), Expect = 9.789e-34
Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = -3

Query:  530 FQNRGKDRVDRDYDRSNKR 586
            F++R KDR D DYDRS  R
Sbjct:  220 FRDREKDRTDPDYDRSYDR 238

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
Match: B9H8R7|B9H8R7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_652547 PE=4 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.275e-33
Identity = 67/112 (59.82%), Postives = 83/112 (74.11%), Query Frame = -1

Query:  202 YVKNVPANQSF*VGAAQYSEFFNLHLVQYDTGFPHLGQMSRTRASLSYRT---PIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 528
            YV+++PANQSF +      +  +   +QYD GFP +GQM RT+ASL Y+    P+M P C+ G NQ SRDA Y+QWP++AMMYA SYEQFRHA FQAP+ QQPLSFDYSQNH
Sbjct:  244 YVRSLPANQSFSLTPFNMQKIPH-PFMQYDAGFPQMGQMPRTQASLGYQPAAGPVMSPFCALGSNQTSRDAAYVQWPSAAMMYAHSYEQFRHAAFQAPFCQQPLSFDYSQNH 354

HSP 2 Score: 28.1054 bits (61), Expect = 1.275e-33
Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = -3

Query:  530 FQNRGKDRVDRDYDRSNKR 586
            F++R KDR D DYDRS  R
Sbjct:  225 FRDREKDRTDPDYDRSYDR 243

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
Match: B9IHM5|B9IHM5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_576127 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.056e-32
Identity = 66/112 (58.93%), Postives = 80/112 (71.43%), Query Frame = -1

Query:  202 YVKNVPANQSF*VGAAQYSEFFNLHLVQYDTGFPHLGQMSRTRASLSYR---TPIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 528
            YV+++PANQSF +      +   +  +QYD  FP LGQM RT+ASL Y     P M P C+ G NQ SRDA Y+QWP++AMMYA SY+QFRHA FQAP+ QQPLSFDYSQNH
Sbjct:  244 YVRSLPANQSFSLTPFNMQKI-PIPYMQYDPSFPQLGQMPRTQASLGYHPAANPAMSPFCAMGSNQTSRDAAYVQWPSTAMMYAHSYDQFRHATFQAPFCQQPLSFDYSQNH 354

HSP 2 Score: 28.8758 bits (63), Expect = 1.056e-32
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = -3

Query:  530 FQNRGKDRVDRDYDRSNKR 586
            F++R KDR D DYDRS +R
Sbjct:  225 FRDREKDRTDPDYDRSYER 243

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
Match: B9RU55|B9RU55_RICCO (R3h domain containing protein, putative OS=Ricinus communis GN=RCOM_1632070 PE=4 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.940e-29
Identity = 61/110 (55.45%), Postives = 77/110 (70.00%), Query Frame = -1

Query:  202 KNVPANQSF*VGAAQYSEFFNLHLVQYDTGFPHLGQMSRTRASLSYR---TPIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 522
            +++P NQ F +      +   L  VQYDTGFP LGQM RT+ +LS++    P+M P  + G NQA RD  Y+QWP++AMMY  SYEQFRHAVFQAP+ QQPLSF Y+QNH
Sbjct:  242 RSLPFNQGFNMAPFNLQKI-QLPYVQYDTGFPQLGQMPRTQNALSHQPAANPVMSPFGAMGSNQAPRDTAYVQWPSTAMMYTHSYEQFRHAVFQAPFSQQPLSFGYAQNH 350

HSP 2 Score: 28.1054 bits (61), Expect = 4.940e-29
Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = -3

Query:  530 FQNRGKDRVDRDYDRSNKR 586
            F++R KDR D DYDRS  R
Sbjct:  222 FRDREKDRTDPDYDRSYDR 240

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
Match: C6TJM9|C6TJM9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.053e-25
Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = -1

Query:  202 YVKNVPANQ----SF*VGAAQYSEFFNLHLVQYDTGFPHLGQMSRTRASLSYR---TPIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 528
            Y +++PA+      F +  AQ S        QYD  F  LGQMS+T+ASL Y    TPIM P  + G NQ S +  Y+QWP++AMMYA SY+QFRH VFQAP+ QQPLSFDYSQN+
Sbjct:  227 YARSIPASAVNLVPFNLQKAQPS------FAQYDATFNQLGQMSQTQASLGYAPPSTPIMSPFGTPGLNQTSSEGAYLQWPSAAMMYAHSYDQFRHGVFQAPFGQQPLSFDYSQNY 336

HSP 2 Score: 24.6386 bits (52), Expect = 5.053e-25
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = -3

Query:  530 QNRGKDRVDRDYDRSNKR 583
            ++R KDR D DYDRS  R
Sbjct:  209 RDREKDRSDPDYDRSYGR 226

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
Match: C6T992|C6T992_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.627e-23
Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = -1

Query:  202 VQYDTGFPHLGQMSRTRASLSYR---TPIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 450
            VQYD  F  L QMS+ +ASL Y    +P+M P   TG NQ  RDA Y+QWP++A+MYA SY+QFR AVFQAP+ Q+PLSFDYSQN+
Sbjct:  270 VQYDNAFNQLSQMSQNQASLGYGPQPSPMMNPFGVTGLNQVPRDAAYVQWPSAAVMYAHSYDQFRQAVFQAPFGQRPLSFDYSQNY 355

HSP 2 Score: 24.6386 bits (52), Expect = 2.627e-23
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = -3

Query:  530 QNRGKDRVDRDYDRSNKR 583
            ++R KDR D DYDR+ +R
Sbjct:  228 RDREKDRSDPDYDRNYER 245

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
Match: A2Q6F7|A2Q6F7_MEDTR (Single-stranded nucleic acid binding R3H OS=Medicago truncatula GN=MtrDRAFT_AC183371g11v1 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.193e-22
Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = -1

Query:  202 FNLHLVQ-----YDTGFPHLGQMSRTRASLSY---RTPIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 465
            FNL   Q     Y+T F  LGQM + +ASL Y    TP+M P C+ G N AS D  Y+QWP+  MMYA SY+QFRHAV+Q+P+  QPLSFDYSQN+
Sbjct:  259 FNLPKAQPSFAPYETTFNQLGQMPQAQASLGYGPPSTPMMSPFCTPGLNPASGDGAYLQWPSPTMMYAHSYDQFRHAVYQSPF-GQPLSFDYSQNY 353

HSP 2 Score: 24.6386 bits (52), Expect = 6.193e-22
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = -3

Query:  530 QNRGKDRVDRDYDRSNKR 583
            ++R KDR D DYDRS  R
Sbjct:  227 RDREKDRSDPDYDRSYGR 244

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
Match: D7LVI6|D7LVI6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486108 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.333e-16
Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = -1

Query:  205 YVKNVPANQSF*VGAAQYSEFFNLHLVQ---YDTGFPHLGQMSRTRASLSYRTP---IMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQN 528
            Y++++P NQ+F +        FN+  +    Y+ GF    Q+  T   L +  P   IM P  ST       DA+YM WP +AMMYA  YEQ R+   QA ++QQPLSFDY QN
Sbjct:  252 YIRSLPVNQNFNLPP------FNIQQIPTPYYEMGFTGYNQIPSTPVPLGFGPPPSSIMSPYGST------MDAMYMHWPNAAMMYAHPYEQLRNGSLQAQFVQQPLSFDYMQN 353

HSP 2 Score: 29.6462 bits (65), Expect = 5.333e-16
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = -3

Query:  530 FQNRGKDRVDRDYDRSNKR 586
            F++R KDR D DYDR N+R
Sbjct:  233 FRDREKDRFDPDYDRRNQR 251

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
Match: Q8LD07|Q8LD07_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.347e-15
Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = -1

Query:  205 YVKNVPANQSF*VGAAQYSEFFNLHLVQ---YDTGFPHLGQMSRTRASLSYRTPIMGPLCSTGFNQASRDA-VYMQWPTSA-MMYAQSYEQFRHAVFQAPYIQQPLSFDYSQN 528
            Y+ N+P +Q+  V        FN+  +    YD GF      +    +L   + +M P  +TG NQ SRDA +YMQWP +A +MY  SY+ FR++ FQA +  QPLSFDY QN
Sbjct:  245 YISNLPVDQNLCVA------HFNIQTMGTPIYDMGFRGYSPTAPPSLNLGQHS-VMSPCVTTGLNQPSRDAAMYMQWPNAAAVMYTHSYDHFRNSPFQAQFYPQPLSFDYMQN 350

HSP 2 Score: 28.1054 bits (61), Expect = 4.347e-15
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = -3

Query:  530 QNRGKDRVDRDYDRSNKR 583
            ++R KDR D DYDRSN R
Sbjct:  227 RDREKDRYDPDYDRSNYR 244

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. Vitis vinifera peptide
Match: GSVIVT01025786001 (assembled CDS)

HSP 1 Score: 149.443 bits (376), Expect = 5.077e-39
Identity = 73/111 (65.77%), Postives = 85/111 (76.58%), Query Frame = -1

Query:  202 YVKNVPANQSF*VGAAQYSEFFNLHLVQYDTGFPHLGQMSRTRASLSYR--TPIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQNH 528
            YV+N+P NQSF +      +  +  L QYDTGFP LGQ+ RT+ASLSYR   PIM P C+ G NQ SRDAVY+QWP+ +MMYA SYEQFRHAVFQAP+ QQPLSFDYSQNH
Sbjct:  247 YVRNLPTNQSFSLAPFDAQKIQHPFL-QYDTGFPQLGQIQRTQASLSYRPSNPIMNPFCAMGLNQTSRDAVYLQWPSHSMMYAHSYEQFRHAVFQAPFCQQPLSFDYSQNH 356

HSP 2 Score: 28.8758 bits (63), Expect = 5.077e-39
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = -3

Query:  530 FQNRGKDRVDRDYDRSNKR 586
            F++R KDR D DYDRS +R
Sbjct:  228 FRDREKDRTDPDYDRSYER 246

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TAIR peptide
Match: AT2G40960.1 (| Symbols: | Single-stranded nucleic acid binding R3H protein | chr2:17095637-17097368 FORWARD LENGTH=351)

HSP 1 Score: 77.411 bits (189), Expect = 3.118e-17
Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = -1

Query:  205 YVKNVPANQSF*VGAAQYSEFFNLHLVQ---YDTGFPHLGQMSRTRASLSYRTPIMGPLCSTGFNQASRDA-VYMQWPTSA-MMYAQSYEQFRHAVFQAPYIQQPLSFDYSQN 528
            Y+ N+P +Q+  V        FN+  +    YD GF      +    +L   + +M P  +TG NQ SRDA +YMQWP +A +MY  SY+ FR++ FQA +  QPLSFDY QN
Sbjct:  245 YISNLPVDQNLCVA------HFNIQTMGTPIYDMGFRGYSPTAPPSLNLGQHS-VMSPCVTTGLNQPSRDAAMYMQWPNAAAVMYTHSYDHFRNSPFQAQFYPQPLSFDYMQN 350

HSP 2 Score: 28.1054 bits (61), Expect = 3.118e-17
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = -3

Query:  530 QNRGKDRVDRDYDRSNKR 583
            ++R KDR D DYDRSN R
Sbjct:  227 RDREKDRYDPDYDRSNYR 244

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TAIR peptide
Match: AT3G56680.1 (| Symbols: | Single-stranded nucleic acid binding R3H protein | chr3:20991537-20993446 FORWARD LENGTH=353)

HSP 1 Score: 77.0258 bits (188), Expect = 5.266e-17
Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = -1

Query:  205 YVKNVPANQSF*VGAAQYSEFFNLHLVQ---YDTGFPHLGQMSRTRASLSYR---TPIMGPLCSTGFNQASRDAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQN 528
            Y++++P NQ+F +        FN+  +    Y+ GF    Q+    A L +    + IM P  +T       DA+YM WP +AMMYA  YEQFR+   QA ++QQPLSFDY QN
Sbjct:  251 YIRSLPVNQNFNLPP------FNIQQIPTPYYEMGFTGYNQIPSPPAPLGFGPHPSSIMSPYGTT------MDAMYMHWPNAAMMYAHPYEQFRNGSLQAQFVQQPLSFDYMQN 352

HSP 2 Score: 27.7202 bits (60), Expect = 5.266e-17
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = -3

Query:  530 FQNRGKDRVDRDYDRSNKR 586
            F++R KDR D DYDR ++R
Sbjct:  232 FRDREKDRFDPDYDRRHQR 250

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TAIR peptide
Match: AT5G33406.1 (| Symbols: | hAT dimerisation domain-containing protein / transposase-related | chr5:12676126-12678403 REVERSE LENGTH=509)

HSP 1 Score: 57.7658 bits (138), Expect = 5.429e-9
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = -1

Query:  205 DAVYMQWPTSAMMYAQSYEQFRHAVFQAPYIQQPLSFDYSQN 330
            DA+YM  P +AMMYA  YEQ R+   QA ++QQPLSFDY +N
Sbjct:  448 DAMYMHLPNAAMMYAHPYEQLRNGPLQAQFVQQPLSFDYCRN 489

The following BLAST results are available for this feature:

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. Populus trichocarpa peptide v2.0
BLAST of Vaccinium_corymbosum_v1_Contig16 vs. P. persica 1.0 peptide
BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
BLAST of Vaccinium_corymbosum_v1_Contig16 vs. Vitis vinifera peptide
BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TAIR peptide

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
POPTR_0006s03320.1	1.054e-35	59.82		[more]
POPTR_0016s03230.1	8.756e-35	58.93		[more]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa007799m	8.933e-30	53.57		[more]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
A5AMT9\|A5AMT9_VITVI	1.012e-36	65.77	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9S6G5\|B9S6G5_RICCO	9.789e-34	58.04	R3h domain containing protein, putative OS=Ricinus...	[more]
B9H8R7\|B9H8R7_POPTR	1.275e-33	59.82	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9IHM5\|B9IHM5_POPTR	1.056e-32	58.93	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RU55\|B9RU55_RICCO	4.940e-29	55.45	R3h domain containing protein, putative OS=Ricinus...	[more]
C6TJM9\|C6TJM9_SOYBN	5.053e-25	52.59	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6T992\|C6T992_SOYBN	2.627e-23	60.47	Putative uncharacterized protein OS=Glycine max PE...	[more]
A2Q6F7\|A2Q6F7_MEDTR	6.193e-22	55.21	Single-stranded nucleic acid binding R3H OS=Medica...	[more]
D7LVI6\|D7LVI6_ARALY	5.333e-16	40.35	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q8LD07\|Q8LD07_ARATH	4.347e-15	40.71	Putative uncharacterized protein OS=Arabidopsis th...	[more]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01025786001	5.077e-39	65.77	assembled CDS	[more]

BLAST of Vaccinium_corymbosum_v1_Contig16 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G40960.1	3.118e-17	40.71	\| Symbols: \| Single-stranded nucleic acid binding...	[more]
AT3G56680.1	5.266e-17	39.47	\| Symbols: \| Single-stranded nucleic acid binding...	[more]
AT5G33406.1	5.429e-9	59.52	\| Symbols: \| hAT dimerisation domain-containing p...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15672	CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN	coord: 49..97 score: 1.3
None	No IPR available	PANTHER	PTHR15672:SF1	R3H DOMAIN CONTAINING PROTEIN	coord: 49..97 score: 1.3

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Vaccinium_corymbosum_v1_Contig16 ID=Vaccinium_corymbosum_v1_Contig16; Name=Vaccinium_corymbosum_v1_Contig16; organism=Vaccinium corymbosum; type=contig; length=612bp
AGCGTGGTCGCGGCCGAGGTACCAGTTGTGTCCTTCCCAAACATCGACGC
ACCAAAAAAAACAAATTGCAGAGACTAATGTGGAACAGAGATGCTAAGAG
AAGTCCTTAAGCAACAAGTAACCTAACATAAAAGCAATTCTGGATAAGAG
AAGAAACAGTATTCAATTCTGTTATACAAACTCTCACATCTGATGGAATC
AATGGTTTTGAGAGTAATCAAAGCTTAGAGGCTGCTGAATGTAAGGGGCC
TGAAAAACAGCATGTCTAAATTGTTCATATGATTGTGCATACATCATAGC
AGAAGTCGGCCACTGCATATAGACAGCATCCCTAGATGCCTGATTGAATC
CCGTGGAACATAAAGGGCCCATGATAGGGGTTCTGTAGCTCAAAGAAGCT
CGGGTTCTTGACATCTGACCCAAATGAGGAAAGCCGGTATCATATTGCAC
CAAATGGAGGTTGAAAAATTCTGAATATTGAGCGGCACCAACCTAAAAGC
TTTGGTTGGCTGGAACATTCTTAACATACCCTTTTGTTACTCCGGTCATA
ATCTCGATCAACACGATCCTTCCCCCTATTCTGAAAATGGCTCNCGGGGA
ACAAAACNCCCC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated