Vaccinium_corymbosum_v1_Contig18

Contig Overview
NameVaccinium_corymbosum_v1_Contig18
Unique NameVaccinium_corymbosum_v1_Contig18
Typecontig
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length632
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
DR067128DR067128Vaccinium corymbosumEST
DW043025DW043025Vaccinium corymbosumEST
EG026093EG026093Vaccinium corymbosumEST


Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
DR067128ESTDR067128:111..628 +
DW043025ESTDW043025:1..632 +
EG026093ESTEG026093:1..632 +
Homology
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. DB:swissprot:display
Match: VP282_ARATH (Vacuolar protein sorting-associated protein 28 homolog 2 OS=Arabidopsis thaliana GN=VPS28-2 PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 7.771e-41
Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 3 
Query:  189 LMEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            +MEVKLWNDKREREMYENFAELFAIIKATEKLEK Y+RD+I+ +EYE ECQKLI HFKTL++TLKDTVP+IERF DTYKMDC AAL RL+TS  P
Sbjct:    1 MMEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLSATLKDTVPNIERFADTYKMDCPAALYRLVTSGLP 95

HSP 2 Score: 26.9498 bits (58), Expect = 7.771e-41
Identity = 21/48 (43.75%), Postives = 26/48 (54.17%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +      IVAECVQNFIT   +  KLN    + QV+P+
Sbjct:   98 VEHRATVA-ASTSNSASIVAECVQNFITSMDSL-KLNM-VAVDQVYPL 142
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. DB:swissprot:display
Match: VP281_ARATH (Vacuolar protein sorting-associated protein 28 homolog 1 OS=Arabidopsis thaliana GN=VPS28-1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.359e-39
Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMYENFAEL+AIIKATEKLEK Y+RD+IS +EYE ECQKLI HFKTL+++LKD VP+IERF +TYKMDC AA+ RL+TS  P
Sbjct:    1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVP 94

HSP 2 Score: 28.1054 bits (61), Expect = 5.359e-39
Identity = 20/48 (41.67%), Postives = 27/48 (56.25%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR    + +      +VAECVQNFIT   +  KLN    + QV+P+
Sbjct:   97 VEHRAAA-SASTSSSASVVAECVQNFITSMDSL-KLNM-VAVDQVYPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. DB:swissprot:display
Match: VPS28_DICDI (Vacuolar protein sorting-associated protein 28 OS=Dictyostelium discoideum GN=vps28 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.331e-20
Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 3 
Query:  189 LMEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            + EVKL+N+  EREMYEN AEL++IIK TE LEK Y+RD +S  +Y   C KLIA FK+  + LKD V ++ +F   Y ++C+AA +RL+    P
Sbjct:   82 IKEVKLFNNNIEREMYENLAELYSIIKVTEHLEKAYIRDDVSPKDYTTACSKLIAQFKSSQTLLKDQVSNVGQFMKDYDLNCKAAFDRLVIKGFP 176
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. DB:swissprot:display
Match: VPS28_DROME (Vacuolar protein sorting-associated protein 28 homolog OS=Drosophila melanogaster GN=Vps28 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.132e-15
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 3 
Query:  195 EVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLK-DTVPSIERFHDTYKMDCQAALNRLITSR 467
            EVKL+ + RERE Y+N A+L+AII   ++LEK Y+RD I+  EY   C K +  +K     ++ D  PS+E F   +++DC AAL R+   R
Sbjct:   11 EVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSKYLVQYKVAFKQVQCDEFPSVETFVKKFRLDCPAALERIREDR 102
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. DB:swissprot:display
Match: VPS28_HUMAN (Vacuolar protein sorting-associated protein 28 homolog OS=Homo sapiens GN=VPS28 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.191e-14
Identity = 35/92 (38.04%), Postives = 58/92 (63.04%), Query Frame = 3 
Query:  195 EVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDT-VPSIERFHDTYKMDCQAALNRLITSR 467
            EVKL+ + RERE Y+N AELFA++K  + LEK Y++D +S +EY   C +L+  +K     ++ + + SI+ F   +++DC  A+ R+   R
Sbjct:   23 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDR 114
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. DB:swissprot:display
Match: VPS28_RAT (Vacuolar protein sorting-associated protein 28 homolog OS=Rattus norvegicus GN=Vps28 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.576e-13
Identity = 34/92 (36.96%), Postives = 57/92 (61.96%), Query Frame = 3 
Query:  195 EVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDT-VPSIERFHDTYKMDCQAALNRLITSR 467
            EVKL+ + RERE Y+N AELFA++K  + LEK Y++D ++  EY   C +L+  +K     ++ + + SI+ F   +++DC  A+ R+   R
Sbjct:   30 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDR 121
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. DB:swissprot:display
Match: VPS28_MOUSE (Vacuolar protein sorting-associated protein 28 homolog OS=Mus musculus GN=Vps28 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.576e-13
Identity = 34/92 (36.96%), Postives = 57/92 (61.96%), Query Frame = 3 
Query:  195 EVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDT-VPSIERFHDTYKMDCQAALNRLITSR 467
            EVKL+ + RERE Y+N AELFA++K  + LEK Y++D ++  EY   C +L+  +K     ++ + + SI+ F   +++DC  A+ R+   R
Sbjct:   23 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDR 114
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. DB:swissprot:display
Match: VPS28_BOVIN (Vacuolar protein sorting-associated protein 28 homolog OS=Bos taurus GN=VPS28 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.576e-13
Identity = 34/92 (36.96%), Postives = 57/92 (61.96%), Query Frame = 3 
Query:  195 EVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDT-VPSIERFHDTYKMDCQAALNRLITSR 467
            EVKL+ + RERE Y+N AELFA++K  + LEK Y++D ++  EY   C +L+  +K     ++ + + SI+ F   +++DC  A+ R+   R
Sbjct:   23 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDR 114
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. DB:swissprot:display
Match: VPS28_CAEEL (Vacuolar protein sorting-associated protein 28 homolog OS=Caenorhabditis elegans GN=vps-28 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.496e-13
Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 3 
Query:  189 LMEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSR 467
            + EV+L+ +  ERE  EN +ELFA++ A E LEK++ RD +S+ EY+ EC KLI  +K +   L     SIE F   Y++ C AA+ R+   R
Sbjct:    9 MREVRLFENHSEREQMENLSELFAVLNALEHLEKMFSRDHVSADEYKSECFKLIDQYK-VTMRLVHGATSIEDFAKKYRLHCPAAIERIREGR 100
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. DB:swissprot:display
Match: VPS28_CAEBR (Vacuolar protein sorting-associated protein 28 homolog OS=Caenorhabditis briggsae GN=vps-28 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.791e-13
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 3 
Query:  189 LMEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSR 467
            + EV+L+ +  ERE  EN +ELFA++ A E LEK++ RD +++ EY+ EC KLI  +K +   L     SIE F   Y++ C AA+ R+   R
Sbjct:    8 MREVRLFENHSEREQMENLSELFAVLNALEHLEKMFSRDHVTADEYKTECFKLIDQYK-VTMRLVHGATSIEEFAKKYRLHCPAAIERIREGR 99
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s03550.1 ()

HSP 1 Score: 168.703 bits (426), Expect = 1.119e-45
Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMYENFAEL+AIIKATEKLEK YVRDIISS+EYE ECQKLIAHFKTLAS+LKDTVPSIERF DTYKMDC AA+NRL+TS  P
Sbjct:    1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYEMECQKLIAHFKTLASSLKDTVPSIERFADTYKMDCPAAINRLVTSGVP 94

HSP 2 Score: 32.7278 bits (73), Expect = 1.119e-45
Identity = 23/48 (47.92%), Postives = 27/48 (56.25%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR     V+      IVAECVQNFIT   +  KLN    + QVHP+
Sbjct:   97 VEHRAAAA-VSSTTSASIVAECVQNFITAMDSL-KLNM-VAVDQVHPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s04360.1 ()

HSP 1 Score: 165.622 bits (418), Expect = 3.498e-44
Identity = 81/94 (86.17%), Postives = 87/94 (92.55%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMY+NFAEL+AIIKATEKLEK YVRDIISS++YE ECQKLIAHFKTLAST KDTVPSIERF DTYKMDC AA+NRL+TS  P
Sbjct:    1 MEVKLWNDKREREMYDNFAELYAIIKATEKLEKGYVRDIISSSQYETECQKLIAHFKTLASTFKDTVPSIERFADTYKMDCPAAINRLVTSGVP 94

HSP 2 Score: 30.8018 bits (68), Expect = 3.498e-44
Identity = 21/48 (43.75%), Postives = 26/48 (54.17%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +      +VAECVQNFIT   +  KLN    + QVHP+
Sbjct:   97 VEHRAAAA-ASSTTSAAVVAECVQNFITAMDSL-KLNM-VAVDQVHPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. P. persica 1.0 peptide
Match: ppa011461m ()

HSP 1 Score: 155.606 bits (392), Expect = 4.477e-40
Identity = 75/94 (79.79%), Postives = 85/94 (90.43%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKL NDKREREMY++FAEL+AIIK TEKLEK Y+RD+ISS+ YE ECQKLIAHFKTLASTLKDT+PSIERF +TYKMDC AA+NRL+TS  P
Sbjct:    1 MEVKLANDKREREMYDSFAELYAIIKTTEKLEKAYIRDVISSSAYETECQKLIAHFKTLASTLKDTIPSIERFAETYKMDCPAAINRLVTSGVP 94

HSP 2 Score: 26.5646 bits (57), Expect = 4.477e-40
Identity = 20/48 (41.67%), Postives = 24/48 (50.00%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +       VAEC QNFIT   +  KLN    + QVHP+
Sbjct:   97 VEHRAAAA-ASMTSSAAAVAECTQNFITAMDSL-KLNM-VAVDQVHPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. P. persica 1.0 peptide
Match: ppa011462m ()

HSP 1 Score: 155.606 bits (392), Expect = 4.477e-40
Identity = 75/94 (79.79%), Postives = 85/94 (90.43%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKL NDKREREMY++FAEL+AIIK TEKLEK Y+RD+ISS+ YE ECQKLIAHFKTLASTLKDT+PSIERF +TYKMDC AA+NRL+TS  P
Sbjct:    1 MEVKLANDKREREMYDSFAELYAIIKTTEKLEKAYIRDVISSSAYETECQKLIAHFKTLASTLKDTIPSIERFAETYKMDCPAAINRLVTSGVP 94

HSP 2 Score: 26.5646 bits (57), Expect = 4.477e-40
Identity = 20/48 (41.67%), Postives = 24/48 (50.00%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +       VAEC QNFIT   +  KLN    + QVHP+
Sbjct:   97 VEHRAAAA-ASMTSSAAAVAECTQNFITAMDSL-KLNM-VAVDQVHPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TrEMBL
Match: A5BEL8|A5BEL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001093 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.656e-44
Identity = 85/94 (90.43%), Postives = 89/94 (94.68%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMYENFAEL+AIIKATEKLEK YVRDIISSAEYEPECQKLIAHFKTLASTLKDT+PSIERF DTYKMDC AA+NRL+TS  P
Sbjct:    1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSAEYEPECQKLIAHFKTLASTLKDTIPSIERFADTYKMDCPAAINRLVTSGVP 94

HSP 2 Score: 30.0314 bits (66), Expect = 1.656e-44
Identity = 21/48 (43.75%), Postives = 26/48 (54.17%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +      +VAECVQNFIT   +  KLN    + QVHP+
Sbjct:   97 VEHRSAAA-ASATTSAAVVAECVQNFITAMDSL-KLNM-VAVDQVHPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TrEMBL
Match: A9PBK3|A9PBK3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_555508 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.377e-43
Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMYENFAEL+AIIKATEKLEK YVRDIISS+EYE ECQKLIAHFKTLAS+LKDTVPSIERF DTYKMDC AA+NRL+TS  P
Sbjct:    1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYEMECQKLIAHFKTLASSLKDTVPSIERFADTYKMDCPAAINRLVTSGVP 94

HSP 2 Score: 32.7278 bits (73), Expect = 1.377e-43
Identity = 23/48 (47.92%), Postives = 27/48 (56.25%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR     V+      IVAECVQNFIT   +  KLN    + QVHP+
Sbjct:   97 VEHRAAAA-VSSTTSASIVAECVQNFITAMDSL-KLNM-VAVDQVHPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TrEMBL
Match: B9HYZ8|B9HYZ8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_833991 PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 4.305e-42
Identity = 81/94 (86.17%), Postives = 87/94 (92.55%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMY+NFAEL+AIIKATEKLEK YVRDIISS++YE ECQKLIAHFKTLAST KDTVPSIERF DTYKMDC AA+NRL+TS  P
Sbjct:    1 MEVKLWNDKREREMYDNFAELYAIIKATEKLEKGYVRDIISSSQYETECQKLIAHFKTLASTFKDTVPSIERFADTYKMDCPAAINRLVTSGVP 94

HSP 2 Score: 30.8018 bits (68), Expect = 4.305e-42
Identity = 21/48 (43.75%), Postives = 26/48 (54.17%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +      +VAECVQNFIT   +  KLN    + QVHP+
Sbjct:   97 VEHRAAAA-ASSTTSAAVVAECVQNFITAMDSL-KLNM-VAVDQVHPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TrEMBL
Match: B9S615|B9S615_RICCO (Vacuolar protein sorting-associated protein VPS28, putative OS=Ricinus communis GN=RCOM_1063030 PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.527e-42
Identity = 81/94 (86.17%), Postives = 87/94 (92.55%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMYENFAEL+AIIKATEKLEK Y+RDIISS++YE ECQKLIAHFKTLASTLKD VPSIERF DTYKMDC AA+NRL+TS  P
Sbjct:    1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDIISSSDYETECQKLIAHFKTLASTLKDIVPSIERFADTYKMDCPAAINRLVTSGVP 94

HSP 2 Score: 28.4906 bits (62), Expect = 9.527e-42
Identity = 21/48 (43.75%), Postives = 27/48 (56.25%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR    + +      IVAECVQNFIT   +  KLN    + QV+P+
Sbjct:   97 VEHRAAAAS-SATTSAAIVAECVQNFITAMDSL-KLNM-VAVDQVYPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TrEMBL
Match: D6BR67|D6BR67_9ROSI (Vacuolar protein sorting-associated protein VPS28 OS=Jatropha curcas PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 9.527e-42
Identity = 80/94 (85.11%), Postives = 86/94 (91.49%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMYENFAEL+AIIKATEKLEK Y+RDII+S+EYE EC KLIAHFKTLASTLKD VPSIERF DTYKMDC AA+NRL+TS  P
Sbjct:    1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDIITSSEYETECHKLIAHFKTLASTLKDIVPSIERFADTYKMDCPAAINRLVTSGVP 94

HSP 2 Score: 30.4166 bits (67), Expect = 9.527e-42
Identity = 22/48 (45.83%), Postives = 26/48 (54.17%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +      IVAECVQNFIT   +  KLN    + QVHP+
Sbjct:   97 VEHRAAAA-ASATTSAAIVAECVQNFITAMDSL-KLNM-VAVDQVHPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TrEMBL
Match: C6T1I2|C6T1I2_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.480e-39
Identity = 77/94 (81.91%), Postives = 84/94 (89.36%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            ME+KLWNDKREREMY+NF EL+AIIKATE+LEK YVRDIIS  EYE ECQKLIAHFKTLASTLKDTVPSIERF DTYKM+C AA+NRL+ S  P
Sbjct:    4 MEIKLWNDKREREMYDNFGELYAIIKATERLEKAYVRDIISPQEYELECQKLIAHFKTLASTLKDTVPSIERFADTYKMECPAAINRLVVSGVP 97

HSP 2 Score: 27.7202 bits (60), Expect = 2.480e-39
Identity = 21/48 (43.75%), Postives = 25/48 (52.08%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +       VAECVQNFIT   +  KLN    + QVHP+
Sbjct:  100 VEHRATAA-ASASTSAATVAECVQNFITSMDSL-KLNM-VAVDQVHPL 144
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TrEMBL
Match: C6TBD2|C6TBD2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 9.276e-39
Identity = 76/94 (80.85%), Postives = 82/94 (87.23%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMY+NF EL+AIIKA E+LEK YVRDIIS  EYE ECQKLIAHFKTLASTLKDTVPSIERF DTYKM+C A +NRL+ S  P
Sbjct:    4 MEVKLWNDKREREMYDNFGELYAIIKAAERLEKAYVRDIISLQEYELECQKLIAHFKTLASTLKDTVPSIERFADTYKMECPAGINRLVVSGVP 97

HSP 2 Score: 29.261 bits (64), Expect = 9.276e-39
Identity = 23/48 (47.92%), Postives = 26/48 (54.17%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHRG            IVAECVQNFIT +    KLN    + QVHP+
Sbjct:  100 VEHRGTVAAFAST-SAAIVAECVQNFIT-FMDFLKLNM-VAVDQVHPL 144
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TrEMBL
Match: D7M1W9|D7M1W9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490145 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 9.279e-39
Identity = 76/94 (80.85%), Postives = 84/94 (89.36%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKRER+MYENFAELFAIIKATEKLEK Y+RD+I+  EYE ECQKLI HFKTL++TLKDTVP+IERF DTYKMDC AAL RL+TS  P
Sbjct:    1 MEVKLWNDKRERDMYENFAELFAIIKATEKLEKAYIRDLINPKEYESECQKLIVHFKTLSATLKDTVPNIERFADTYKMDCPAALYRLVTSGVP 94

HSP 2 Score: 26.9498 bits (58), Expect = 9.279e-39
Identity = 21/48 (43.75%), Postives = 26/48 (54.17%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +      IVAECVQNFIT   +  KLN    + QV+P+
Sbjct:   97 VEHRATV-TASTSNSASIVAECVQNFITSMDSL-KLNM-VAVDQVYPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TrEMBL
Match: D7MES4|D7MES4_ARALY (Vacuolar protein sorting-associated protein 28 family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492725 PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.704e-38
Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMYENFAEL+AIIKATEKLEK Y+RD+IS +EYE ECQKLI HFKTL+++LKD VP+IERF +TYKMDC AA+ RL+TS  P
Sbjct:    1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVP 94

HSP 2 Score: 28.1054 bits (61), Expect = 7.704e-38
Identity = 20/48 (41.67%), Postives = 27/48 (56.25%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR    + +      +VAECVQNFIT   +  KLN    + QV+P+
Sbjct:   97 VEHRAAA-SASTSSSASVVAECVQNFITSMDSL-KLNM-VAVDQVYPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TrEMBL
Match: D5A9P7|D5A9P7_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.989e-35
Identity = 70/93 (75.27%), Postives = 81/93 (87.10%), Query Frame = 3 
Query:  195 EVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            EVKLWNDKREREMY+NFA+LFAII+  EKLEK YVRD+ISS +YEPEC KLIA FKTL ++LKDTVPS+ERF +TYKMDC AA+NRL+ S  P
Sbjct:    8 EVKLWNDKREREMYDNFADLFAIIRTMEKLEKAYVRDVISSKDYEPECTKLIAQFKTLTTSLKDTVPSVERFMETYKMDCPAAVNRLLVSGIP 100

HSP 2 Score: 25.0238 bits (53), Expect = 1.989e-35
Identity = 14/28 (50.00%), Postives = 16/28 (57.14%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFIT 565
            VEHR    +V        VAECVQ+FIT
Sbjct:  103 VEHRASSSDVGT---AAAVAECVQHFIT 127
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. Vitis vinifera peptide
Match: GSVIVT01006715001 (assembled CDS)

HSP 1 Score: 174.481 bits (441), Expect = 8.232e-47
Identity = 85/94 (90.43%), Postives = 89/94 (94.68%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMYENFAEL+AIIKATEKLEK YVRDIISSAEYEPECQKLIAHFKTLASTLKDT+PSIERF DTYKMDC AA+NRL+TS  P
Sbjct:    1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSAEYEPECQKLIAHFKTLASTLKDTIPSIERFADTYKMDCPAAINRLVTSGVP 94

HSP 2 Score: 30.0314 bits (66), Expect = 8.232e-47
Identity = 21/48 (43.75%), Postives = 26/48 (54.17%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +      +VAECVQNFIT   +  KLN    + QVHP+
Sbjct:   97 VEHRSAAA-ASATTSAAVVAECVQNFITAMDSL-KLNM-VAVDQVHPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TAIR peptide
Match: AT4G05000.2 (| Symbols: VPS28-1 | Vacuolar protein sorting-associated protein VPS28 family protein | chr4:2563953-2564585 FORWARD LENGTH=210)

HSP 1 Score: 161.384 bits (407), Expect = 7.989e-42
Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 3 
Query:  189 LMEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            +MEVKLWNDKREREMYENFAELFAIIKATEKLEK Y+RD+I+ +EYE ECQKLI HFKTL++TLKDTVP+IERF DTYKMDC AAL RL+TS  P
Sbjct:    1 MMEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLSATLKDTVPNIERFADTYKMDCPAALYRLVTSGLP 95

HSP 2 Score: 26.9498 bits (58), Expect = 7.989e-42
Identity = 21/48 (43.75%), Postives = 26/48 (54.17%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +      IVAECVQNFIT   +  KLN    + QV+P+
Sbjct:   98 VEHRATVA-ASTSNSASIVAECVQNFITSMDSL-KLNM-VAVDQVYPL 142
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TAIR peptide
Match: AT4G05000.1 (| Symbols: VPS28-2 | Vacuolar protein sorting-associated protein VPS28 family protein | chr4:2563953-2564585 FORWARD LENGTH=210)

HSP 1 Score: 161.384 bits (407), Expect = 7.989e-42
Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 3 
Query:  189 LMEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            +MEVKLWNDKREREMYENFAELFAIIKATEKLEK Y+RD+I+ +EYE ECQKLI HFKTL++TLKDTVP+IERF DTYKMDC AAL RL+TS  P
Sbjct:    1 MMEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLSATLKDTVPNIERFADTYKMDCPAALYRLVTSGLP 95

HSP 2 Score: 26.9498 bits (58), Expect = 7.989e-42
Identity = 21/48 (43.75%), Postives = 26/48 (54.17%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR      +      IVAECVQNFIT   +  KLN    + QV+P+
Sbjct:   98 VEHRATVA-ASTSNSASIVAECVQNFITSMDSL-KLNM-VAVDQVYPL 142
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TAIR peptide
Match: AT4G21560.3 (| Symbols: VPS28-1 | vacuolar protein sorting-associated protein 28 homolog 1 | chr4:11469037-11469666 REVERSE LENGTH=209)

HSP 1 Score: 154.066 bits (388), Expect = 5.508e-40
Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMYENFAEL+AIIKATEKLEK Y+RD+IS +EYE ECQKLI HFKTL+++LKD VP+IERF +TYKMDC AA+ RL+TS  P
Sbjct:    1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVP 94

HSP 2 Score: 28.1054 bits (61), Expect = 5.508e-40
Identity = 20/48 (41.67%), Postives = 27/48 (56.25%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR    + +      +VAECVQNFIT   +  KLN    + QV+P+
Sbjct:   97 VEHRAAA-SASTSSSASVVAECVQNFITSMDSL-KLNM-VAVDQVYPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TAIR peptide
Match: AT4G21560.2 (| Symbols: VPS28-1 | vacuolar protein sorting-associated protein 28 homolog 1 | chr4:11469037-11469666 REVERSE LENGTH=209)

HSP 1 Score: 154.066 bits (388), Expect = 5.508e-40
Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMYENFAEL+AIIKATEKLEK Y+RD+IS +EYE ECQKLI HFKTL+++LKD VP+IERF +TYKMDC AA+ RL+TS  P
Sbjct:    1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVP 94

HSP 2 Score: 28.1054 bits (61), Expect = 5.508e-40
Identity = 20/48 (41.67%), Postives = 27/48 (56.25%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR    + +      +VAECVQNFIT   +  KLN    + QV+P+
Sbjct:   97 VEHRAAA-SASTSSSASVVAECVQNFITSMDSL-KLNM-VAVDQVYPL 141
[Close]
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TAIR peptide
Match: AT4G21560.1 (| Symbols: VPS28-1 | vacuolar protein sorting-associated protein 28 homolog 1 | chr4:11469037-11469666 REVERSE LENGTH=209)

HSP 1 Score: 154.066 bits (388), Expect = 5.508e-40
Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 3 
Query:  192 MEVKLWNDKREREMYENFAELFAIIKATEKLEKLYVRDIISSAEYEPECQKLIAHFKTLASTLKDTVPSIERFHDTYKMDCQAALNRLITSRRP 473
            MEVKLWNDKREREMYENFAEL+AIIKATEKLEK Y+RD+IS +EYE ECQKLI HFKTL+++LKD VP+IERF +TYKMDC AA+ RL+TS  P
Sbjct:    1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVP 94

HSP 2 Score: 28.1054 bits (61), Expect = 5.508e-40
Identity = 20/48 (41.67%), Postives = 27/48 (56.25%), Query Frame = 2 
Query:  482 VEHRGCCCNVNDYFGLPIVAECVQNFITCYGTR*KLNYGXLLIQVHPV 625
            VEHR    + +      +VAECVQNFIT   +  KLN    + QV+P+
Sbjct:   97 VEHRAAA-SASTSSSASVVAECVQNFITSMDSL-KLNM-VAVDQVYPL 141
The following BLAST results are available for this feature:
BLAST of Vaccinium_corymbosum_v1_Contig18 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
VP282_ARATH7.771e-4181.05Vacuolar protein sorting-associated protein 28 hom... [more]
VP281_ARATH5.359e-3977.66Vacuolar protein sorting-associated protein 28 hom... [more]
VPS28_DICDI6.331e-2049.47Vacuolar protein sorting-associated protein 28 OS=... [more]
VPS28_DROME6.132e-1542.39Vacuolar protein sorting-associated protein 28 hom... [more]
VPS28_HUMAN5.191e-1438.04Vacuolar protein sorting-associated protein 28 hom... [more]
VPS28_RAT2.576e-1336.96Vacuolar protein sorting-associated protein 28 hom... [more]
VPS28_MOUSE2.576e-1336.96Vacuolar protein sorting-associated protein 28 hom... [more]
VPS28_BOVIN2.576e-1336.96Vacuolar protein sorting-associated protein 28 hom... [more]
VPS28_CAEEL7.496e-1341.94Vacuolar protein sorting-associated protein 28 hom... [more]
VPS28_CAEBR9.791e-1340.86Vacuolar protein sorting-associated protein 28 hom... [more]
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BLAST of Vaccinium_corymbosum_v1_Contig18 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
POPTR_0004s03550.11.119e-4588.30[more]
POPTR_0011s04360.13.498e-4486.17[more]
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BLAST of Vaccinium_corymbosum_v1_Contig18 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
ppa011461m4.477e-4079.79[more]
ppa011462m4.477e-4079.79[more]
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BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A5BEL8|A5BEL8_VITVI1.656e-4490.43Putative uncharacterized protein OS=Vitis vinifera... [more]
A9PBK3|A9PBK3_POPTR1.377e-4388.30Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HYZ8|B9HYZ8_POPTR4.305e-4286.17Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S615|B9S615_RICCO9.527e-4286.17Vacuolar protein sorting-associated protein VPS28,... [more]
D6BR67|D6BR67_9ROSI9.527e-4285.11Vacuolar protein sorting-associated protein VPS28 ... [more]
C6T1I2|C6T1I2_SOYBN2.480e-3981.91Putative uncharacterized protein (Fragment) OS=Gly... [more]
C6TBD2|C6TBD2_SOYBN9.276e-3980.85Putative uncharacterized protein OS=Glycine max PE... [more]
D7M1W9|D7M1W9_ARALY9.279e-3980.85Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7MES4|D7MES4_ARALY7.704e-3877.66Vacuolar protein sorting-associated protein 28 fam... [more]
D5A9P7|D5A9P7_PICSI1.989e-3575.27Putative uncharacterized protein OS=Picea sitchens... [more]
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BLAST of Vaccinium_corymbosum_v1_Contig18 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010067150018.232e-4790.43assembled CDS[more]
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BLAST of Vaccinium_corymbosum_v1_Contig18 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G05000.27.989e-4281.05| Symbols: VPS28-1 | Vacuolar protein sorting-asso... [more]
AT4G05000.17.989e-4281.05| Symbols: VPS28-2 | Vacuolar protein sorting-asso... [more]
AT4G21560.35.508e-4077.66| Symbols: VPS28-1 | vacuolar protein sorting-asso... [more]
AT4G21560.25.508e-4077.66| Symbols: VPS28-1 | vacuolar protein sorting-asso... [more]
AT4G21560.15.508e-4077.66| Symbols: VPS28-1 | vacuolar protein sorting-asso... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007143Vacuolar protein sorting-associated, VPS28PANTHERPTHR12937VACUOLAR PROTEIN SORTING 28, ISOFORM 2 (VPS28)coord: 9..106
score: 1.7
IPR007143Vacuolar protein sorting-associated, VPS28PFAMPF03997VPS28coord: 29..103
score: 3.8
IPR017898Vacuolar protein sorting-associated, VPS28, N-terminalPROFILEPS51313VPS28_Ncoord: 3..110
score: 19
NoneNo IPR availableSEGsegsegcoord: 113..123
score
NoneNo IPR availableSUPERFAMILY140111Endosomal sorting complex assembly domaincoord: 4..102
score: 1.2

Sequences
The following sequences are available for this feature:

contig sequence

>Vaccinium_corymbosum_v1_Contig18 ID=Vaccinium_corymbosum_v1_Contig18; Name=Vaccinium_corymbosum_v1_Contig18; organism=Vaccinium corymbosum; type=contig; length=632bp
TCGAGCGGCCGCCCGGGCAGGTACGCGGGGATTATTGGGTTGACTTTTCG
AAGCCCTGATGGTTCCTTTCTTCTGAGCGAAAAAGGTTGGTCACATTTGC
GCGTGTCCCATTCTCTTCTCCATTTTGAAGTTTGAAGCCCTATTAAATTA
TAGTTTAGAAAAAAAACAAATCTGCATTCTTATACTATCTAATGGAAGTC
AAGCTATGGAATGACAAGCGCGAGAGAGAGATGTATGAGAACTTTGCCGA
GCTCTTTGCTATCATCAAAGCTACTGAAAAGCTAGAGAAGCTTTACGTTC
GGGACATCATTTCATCAGCAGAGTATGAGCCCGAATGCCAAAAGCTAATT
GCCCATTTCAAAACTTTAGCTTCCACACTCAAAGACACTGTTCCAAGCAT
TGAGAGGTTCCATGACACATATAAGATGGATTGCCAAGCTGCCTTGAACC
GCCTTATCACTTCCCGGCGTCCCTGCAACCAGTTGAGCACAGGGGCTGCT
GCTGCAATGTCAATGACTACTTCGGCCTTCCCATAGTGGCTGAATGTGTG
CAGAACTTTATTACTTGCTATGGGACTCGTTGAAAACTGAATTATGGTNG
CCTGTTGATTCAGGTCCACCCCGTTGGCTGGT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K12184VPS28; ESCRT-I complex subunit VPS28
Vocabulary: KEGG PATHWAY
TermDefinition
ko04144Endocytosis
Vocabulary: INTERPRO
TermDefinition
IPR007143Vps28
IPR017898VPS28_N
noIPRunintegrated