Vaccinium_corymbosum_v1_Contig2
Contig Overview
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Alignments
The following features are aligned
Homology
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. DB:swissprot:display
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 9.186e-24 Identity = 48/65 (73.85%), Postives = 53/65 (81.54%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSL---VIETESYIETFVADAPAAENDGKCKCGTACACVNCTCGH 272 MSD CGNCDCADK+QCVKKG+S +IETE I T V DAPAAENDGKCKCG +C+C NCTCGH Sbjct: 1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMTVVMDAPAAENDGKCKCGPSCSCTNCTCGH 65
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. DB:swissprot:display
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.598e-22 Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSL-VIETE-SYIETFVADAPAAENDGKCKCGTACACVNCTC 266 MSDKCGNCDCAD SQCVKKGNS+ ++ET+ SYIE V PAAE+ GKCKCGT+C CVNCTC Sbjct: 1 MSDKCGNCDCADSSQCVKKGNSIDIVETDKSYIEDVVMGVPAAESGGKCKCGTSCPCVNCTC 62
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. DB:swissprot:display
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.267e-21 Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNS---LVIETESY-IETFVADAPAAENDGKCKCGTACACVNCTCGH 272 MS KC NCDCAD +QCVKKGNS +++ETE+ ++T DAPAAE+DGKCKCGT C+CV+CTCGH Sbjct: 1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFVDAPAAEHDGKCKCGTGCSCVSCTCGH 66
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. DB:swissprot:display
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.518e-18 Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 99 CGNCDCADKSQCVKKGNSL---VIETE-SYIETFVADAPAAENDGKCKCGTACACVNCTCGH 272 CGNCDC DKSQCVKKGNS ++ETE SY++ + A AAE+DGKCKCG ACAC +C CG+ Sbjct: 4 CGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVAAEAAEHDGKCKCGAACACTDCKCGN 65
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. DB:swissprot:display
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.882e-17 Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNS---LVIETESY-IETFVADAPAAENDGKCKCGTACACVNCTC 266 MS KC NCDC+D SQC KKG S +++ETE+ ++T + DAPAAEN G CKCG +CACV+C C Sbjct: 1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVIMDAPAAENGGNCKCGPSCACVDCKC 64
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. DB:swissprot:display
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.133e-16 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNS---LVIETESYIETFVADAPAAENDGKCKCGTACACVNCTCG 269 MSDKCGNCDCADKSQCVKKG S ++++ E + ENDGKCKC T C+C C CG Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFEMAEEVGYEENDGKCKCTTGCSCAGCNCG 64
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. DB:swissprot:display
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.207e-16 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSLVIETESYIETFVADAPAAENDGKCKCGTACACVNCTCG 269 MSDKCGNCDCADKSQCVKKG S + ++ + A E +G CKCGT+C+C +C CG Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFEEVAAGEENGGCKCGTSCSCTDCKCG 61
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. DB:swissprot:display
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.207e-16 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSLVIETESYIETFVADAPAAENDGKCKCGTACACVNCTCG 269 MSDKCGNCDCADKSQCVKKG S + ++ + A E +G CKCGT+C+C +C CG Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFEEVAAGEENGGCKCGTSCSCTDCKCG 61
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. DB:swissprot:display
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.571e-15 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNS---LVIETESYIETFVADAPAAENDGKCKCGTACACVNCTCG 269 MSDKCG+CDCADKSQCVKKG S ++++ E + ENDGKCKC T C+C C CG Sbjct: 1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFEMAEEVGYEENDGKCKCTTGCSCAGCNCG 64
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. DB:swissprot:display
Match: MT3_PICGL (Metallothionein-like protein EMB30 OS=Picea glauca GN=EMB30 PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 4.426e-10 Identity = 31/60 (51.67%), Postives = 34/60 (56.67%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSLVIETESYIETFVADAPAAENDGKCKCGTACACVNCTC 266 MS CGNCDCADKSQC KKG + E+ E + END CKCG C C CTC Sbjct: 1 MSSDCGNCDCADKSQCTKKGFQIDGIVETSYEMGHGGDVSLEND--CKCGPNCQCGTCTC 58
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s11960.1 () HSP 1 Score: 93.2041 bits (230), Expect = 8.782e-20 Identity = 41/66 (62.12%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSL---VIETE-SYIETFVADAPAAENDGKCKCGTACACVNCTCGH 272 MS C NCDCADK+QCVKKG+S ++ETE S++ T V + PA ENDGKCKCG C C CTCGH Sbjct: 1 MSSTCDNCDCADKTQCVKKGSSYTADIVETEKSHVYTGVMEVPATENDGKCKCGANCTCTTCTCGH 66
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. P. persica 1.0 peptide
Match: ppa014506m () HSP 1 Score: 87.8113 bits (216), Expect = 2.635e-18 Identity = 37/66 (56.06%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNS---LVIETESY-IETFVADAPAAENDGKCKCGTACACVNCTCGH 272 MS KC +C+C D SQC KKG+S +++ETE+ ++T + DAPAAENDGKCKC +C+CV+C CG+ Sbjct: 1 MSSKCSDCNCTDSSQCTKKGSSYDLVIVETENRSMDTVIMDAPAAENDGKCKCAPSCSCVDCKCGN 66
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TrEMBL
Match: Q5I3E2|Q5I3E2_GOSHI (Metallothionein-like OS=Gossypium hirsutum PE=4 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.437e-23 Identity = 51/62 (82.26%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSLVIET-ESYIETFVADAPAAENDGKCKCGTACACVNCTCG 269 M+DKCGNCDCADKSQCVKKGNSLVIET ESYI T V + P AENDGKCKCGT+C+C NCTCG Sbjct: 1 MADKCGNCDCADKSQCVKKGNSLVIETEESYISTVVVE-PLAENDGKCKCGTSCSCTNCTCG 61
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TrEMBL
Match: O65885|O65885_RUBID (Metallothionein-like protein OS=Rubus idaeus GN=RAS2 PE=4 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.913e-21 Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSLVI-ETESYIETFVADAPAAENDGKCKCGTACACVNCTCGH 272 MS KC +CDC+D SQCVKKGNSLVI ETE +T V DAPAAENDGKCKCGT C+C +C CGH Sbjct: 1 MSGKCDSCDCSDASQCVKKGNSLVIVETEKSYDTVVMDAPAAENDGKCKCGTTCSCTDCKCGH 63
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TrEMBL
Match: B9SIK2|B9SIK2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0821630 PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.138e-20 Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSL---VIETE-SYIETFVADAPAAENDGKCKCGTACACVNCTCGH 272 MS CGNCDCADKSQCVKKG+S ++ETE S++ T + D PAAE+DGKCKCG +C CV CTCGH Sbjct: 1 MSSTCGNCDCADKSQCVKKGSSYTADIVETEKSFVSTIIMDVPAAEHDGKCKCGASCTCVTCTCGH 66
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TrEMBL
Match: B9T0E5|B9T0E5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0507790 PE=4 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.487e-20 Identity = 46/66 (69.70%), Postives = 52/66 (78.79%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSL---VIETE-SYIETFVADAPAAENDGKCKCGTACACVNCTCGH 272 MS CGNCDCADKSQCVKKG+S V+ETE S + T V + PAAE+DGKCKCG +C CVNCTCGH Sbjct: 1 MSSTCGNCDCADKSQCVKKGSSYTADVVETEKSSVSTIVMEVPAAEHDGKCKCGASCTCVNCTCGH 66
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TrEMBL
Match: Q9XET5|Q9XET5_GOSHI (Metallothionein-like protein OS=Gossypium hirsutum PE=4 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.942e-20 Identity = 46/64 (71.88%), Postives = 53/64 (82.81%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVK-KGNSLVIETE-SYIETFVADAPAAENDGKCKCGTACACVNCTCGH 272 MSD+CGNCDCAD+SQC K N+++IETE SYI T V DAPA ENDGKCKCGT C+C +CTCGH Sbjct: 1 MSDRCGNCDCADRSQCTKGNSNTMIIETEKSYINTAVMDAPA-ENDGKCKCGTGCSCTDCTCGH 63
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TrEMBL
Match: D2CGP2|D2CGP2_MALDO (Metallothionein-like protein OS=Malus domestica GN=AMT2 PE=4 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.326e-20 Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNS---LVIETESY-IETFVADAPAAENDGKCKCGTACACVNCTCGH 272 MS KC NCDCAD +QCVKKGNS +++ETE+ ++T DAPAAE+DGKCKCGT C+CV+CTCGH Sbjct: 1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFVDAPAAEHDGKCKCGTGCSCVSCTCGH 66
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TrEMBL
Match: O23938|O23938_FRAVE (Metallothionein-like protein OS=Fragaria vesca PE=4 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.259e-19 Identity = 43/63 (68.25%), Postives = 49/63 (77.78%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSLVI-ETESYIETFVADAPAAENDGKCKCGTACACVNCTCGH 272 MS KC +CDC+D SQC KKGNSLVI ETE +T V DAP AEN GKCKCGT C+C++C CGH Sbjct: 1 MSGKCDSCDCSDVSQCTKKGNSLVIVETEKSYDTVVMDAPTAENGGKCKCGTTCSCIDCKCGH 63
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TrEMBL
Match: D6BQM9|D6BQM9_9ROSI (Metallothionein-like MT-3 OS=Jatropha curcas PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.662e-19 Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSL---VIETE-SYIETFVADAPA-AENDGKCKCGTACACVNCTCGH 272 MS CGNCDCADKSQCVKKG+S ++ETE S++ T V D PA AENDGKCKCG +C CV+C CGH Sbjct: 1 MSSTCGNCDCADKSQCVKKGSSYTADIVETEKSFVSTIVMDVPAGAENDGKCKCGPSCTCVDCGCGH 67
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TrEMBL
Match: B5L6N5|B5L6N5_PROJU (Type 3 metallothionein OS=Prosopsis juliflora GN=MT3 PE=4 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.783e-19 Identity = 44/67 (65.67%), Postives = 52/67 (77.61%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSLVIE----TESYIETF-VADAPAAENDGKCKCGTACACVNCTCGH 272 MSDKCGNCDCADKSQCVKKGN V + SY E++ +A A A E+DGKCKCG +C+CV+CTCGH Sbjct: 1 MSDKCGNCDCADKSQCVKKGNGYVADIIDPDNSYDESYMMAGAAAGEHDGKCKCGPSCSCVDCTCGH 67
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TrEMBL
Match: A8CVE7|A8CVE7_AVIMR (Metallothionein class I type 3 (Fragment) OS=Avicennia marina GN=MT3 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.159e-19 Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 3 Query: 99 CGNCDCADKSQCVKKGNSL-VIETE-SYIET-FVADAPAAENDGKCKCGTACACVNCTCGH 272 CGNCDCADKSQC+KKG + +IETE SY+E + DAPAAE+DGKCKCG +CAC NCTCGH Sbjct: 1 CGNCDCADKSQCMKKGYAAEIIETEKSYMEAAMLVDAPAAEHDGKCKCGPSCACTNCTCGH 61
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. Vitis vinifera peptide
Match: GSVIVT01014340001 (assembled CDS) HSP 1 Score: 94.7449 bits (234), Expect = 1.854e-20 Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 99 CGNCDCADKSQCVKKGNSL---VIETE-SYIETFVADAPAAENDGKCKCGTACACVNCTCG 269 CGNCDCADKSQCVKKGNS ++ETE SY+ T V + PAA+++G CKCG +CAC++CTCG Sbjct: 4 CGNCDCADKSQCVKKGNSYGIDIVETEKSYVATVVMEVPAAQHEGSCKCGDSCACIDCTCG 64
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TAIR peptide
Match: AT3G15353.1 (| Symbols: MT3, ATMT3 | metallothionein 3 | chr3:5180825-5181325 REVERSE LENGTH=69) HSP 1 Score: 83.9593 bits (206), Expect = 4.629e-17 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSL---VIET-ESYIETFVADAPAAENDG--KCKCGTACACVNCTC 266 MS CG+CDCADK+QCVKKG S ++ET ESY E + D A EN+ KCKCG++C+CVNCTC Sbjct: 1 MSSNCGSCDCADKTQCVKKGTSYTFDIVETQESYKEAMIMDVGAEENNANCKCKCGSSCSCVNCTC 66
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TAIR peptide
Match: AT3G15353.2 (| Symbols: MT3 | metallothionein 3 | chr3:5180825-5181325 REVERSE LENGTH=67) HSP 1 Score: 73.9442 bits (180), Expect = 4.790e-14 Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 87 MSDKCGNCDCADKSQCVKKGNSL---VIET-ESYIETFVADAPAAENDG--KCKCGTACACVNCTC 266 MS CG+CDCADK+Q KKG S ++ET ESY E + D A EN+ KCKCG++C+CVNCTC Sbjct: 1 MSSNCGSCDCADKTQ--KKGTSYTFDIVETQESYKEAMIMDVGAEENNANCKCKCGSSCSCVNCTC 64 The following BLAST results are available for this feature:
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot) Total hits: 10
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 10
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of Vaccinium_corymbosum_v1_Contig2 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 2
Sequences
The
following sequences are available for this feature:
contig sequence >Vaccinium_corymbosum_v1_Contig2 ID=Vaccinium_corymbosum_v1_Contig2; Name=Vaccinium_corymbosum_v1_Contig2; organism=Vaccinium corymbosum; type=contig; length=493bpback to top |