Vaccinium_corymbosum_v1_Contig20

Contig Overview
NameVaccinium_corymbosum_v1_Contig20
Unique NameVaccinium_corymbosum_v1_Contig20
Typecontig
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length464
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
EG026090EG026090Vaccinium corymbosumEST
DW042996DW042996Vaccinium corymbosumEST


Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
EG026090ESTEG026090:1..464 +
DW042996ESTDW042996:1..464 +
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 38..57
score: NAcoord: 66..83
score: NAcoord: 88..98
score
NoneNo IPR availableSEGsegsegcoord: 56..69
score: NAcoord: 77..89
score
NoneNo IPR availableSEGsegsegcoord: 4..16
score: NAcoord: 20..39
score
NoneNo IPR availableSEGsegsegcoord: 27..50
score
NoneNo IPR availableSEGsegsegcoord: 8..33
score
NoneNo IPR availableSEGsegsegcoord: 11..30
score
NoneNo IPR availableSEGsegsegcoord: 13..22
score: NAcoord: 35..45
score: NAcoord: 50..67
score: NAcoord: 76..95
score
NoneNo IPR availableSEGsegsegcoord: 11..20
score: NAcoord: 31..68
score: NAcoord: 76..89
score

Sequences
The following sequences are available for this feature:

contig sequence

>Vaccinium_corymbosum_v1_Contig20 ID=Vaccinium_corymbosum_v1_Contig20; Name=Vaccinium_corymbosum_v1_Contig20; organism=Vaccinium corymbosum; type=contig; length=464bp
TTGCCTTTTAATTTTCGTTGAAAATTCTGCTGATGGCTATTTGCCTTTAT
TTTGCATAGCCTTTATAAGGCCGCATTGACAAAATTGAGGTGGGGGAGAA
AAANACTTCCCCGGGGCCCTTGGAAAGAATTTCCCCCCCGCGGCCGCCGG
CCCTGTGGGGAGAAAGGGGAGAATATTCCCCTTTTTTCCCCCCCCACAGG
GCCCCCCCGCCGGGGGGCCCCGCTTTCNCCCCCGCCGGGAAAAATAACAC
GCCAGGAATTTCTCCCCCTAAAGTGGCCCCCCCTCCCATATACCCCCCCT
TTTTTTTCCTTTTTNTAGAAAGAAAAAGGGGGGCCGGGGGGGGCGCTGGG
GGGGGTTGTGGGAGGGAGAAAAAATTTTTCCCCGAAGAAAAAACTATTTT
TTCCCTCTTTTTCTNGCGGGGTTTTTTTTGTGGGAAAATATATTTGGGGG
GCGCGCCACAGGGG
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated