Vaccinium_corymbosum_v1_Contig23

Contig Overview


Name	Vaccinium_corymbosum_v1_Contig23
Unique Name	Vaccinium_corymbosum_v1_Contig23
Type	contig
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	632

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
EG026083	EG026083	Vaccinium corymbosum	EST
DW042989	DW042989	Vaccinium corymbosum	EST

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
EG026083	EST	EG026083:1..632 +
DW042989	EST	DW042989:1..632 +

Homology

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s04880.1 ()

HSP 1 Score: 151.369 bits (381), Expect = 4.324e-37
Identity = 96/209 (45.93%), Postives = 117/209 (55.98%), Query Frame = -3

Query:    7 ESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPE-----------TRRXXXXXXXXXXXXLGVWHSIVEEATGMQ-GELRDESLDHETMQRFVSPVTAKIESDEYAEYLGRD 597
            E HASFV LF  VFSHTPTLMVYVM+LLA ++V+SM+ N A+AAP    SY A TES+SV E      K QKFD                           K RP+AS T+G+G FD S   N  R+++P+                          L +W+SIVEEA+ MQ   LRDESLDHET+QRFVSP+ AKIE+D+YAEY   D
Sbjct:  257 EMHASFVWLFQQVFSHTPTLMVYVMILLANFTVHSMANNAALAAPPNSGSYAATTESISVVETP--DQKNQKFDSSSVKMFSVSSSSGKTTSIGGNNGGGGKVRPLASGTEGDGWFDQS---NQIRTIVPDGASQLSSLGTSREAESASEQVSREEELSLWNSIVEEASKMQYFPLRDESLDHETIQRFVSPINAKIEADDYAEYFRTD 460

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s25720.1 ()

HSP 1 Score: 145.976 bits (367), Expect = 1.817e-35
Identity = 92/208 (44.23%), Postives = 114/208 (54.81%), Query Frame = -3

Query:    7 ESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPE-----------TRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEYLGRD 597
            E HASFV LF  VFSHTPTLMVYVM+LLA ++V+SM+ N AIAAP    SY A TESVSV E+     K QKF                            K RPVAS T+G+G FD S   +  R+++P+                          L +W+SIV+EA+ MQ  LRD SLDHET  RFVSP++AKIE+D+Y +Y   D
Sbjct:  228 EMHASFVWLFQQVFSHTPTLMVYVMILLANFTVHSMANNTAIAAPPNTGSYAATTESVSVVEN--LDQKNQKFYSSSVKTFSVPSSSGKTTSIGGNNGGGGKVRPVASGTEGDGWFDQS---SQFRTIVPDGASQLSSLGTSREAESVSEQVSGAEELSLWNSIVDEASKMQSSLRDVSLDHETTHRFVSPISAKIEADDYEDYFRTD 430

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s19900.1 ()

HSP 1 Score: 79.7221 bits (195), Expect = 1.599e-15
Identity = 64/200 (32.00%), Postives = 91/200 (45.50%), Query Frame = -3

Query:    7 ESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDD-STLLNYHRSVIPETRRXXXXXXXXXXXXLG--VWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEYLGRD 597
            E +ASFV LF  VFS TPTLMVYVM+LLA ++V+SM GN+ + A  L   +    E+++  ++     +Q   D                             R +  +  G+  F   S  + Y   V  ET                  +W+++VEEA+ MQ E   E LD ETM++FVS VT  +E  +Y EY   D
Sbjct:  234 ELNASFVWLFQQVFSRTPTLMVYVMLLLANFTVHSMFGNIGVTAAPLPRIF---QETITTPDE--MDQEQSNADHAVGNNNGGAGKVD---------------RSIGGSEGGDWHFGRISPFIRYPNLVPEETGEVSLPGNQEMVSVEEAVLWNAMVEEASRMQVESGYEVLDRETMKQFVSRVTVDLEPSDYVEYYRTD 413

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. P. persica 1.0 peptide
Match: ppa003334m ()

HSP 1 Score: 120.939 bits (302), Expect = 4.481e-28
Identity = 82/208 (39.42%), Postives = 106/208 (50.96%), Query Frame = -3

Query:   19 ESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQ---QKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKY-RPVASNTDGEGRFDDSTLLNYHRSVIPE-----------TRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 597
            E HASFV LF  VFS TPTLMVYVM+LLA ++VYS+  N AIAA      Y + TE+    E+   HN +    +FD                              RPV S T+G+GRFD    ++ +R+++P+           T              L VW+SIVEEA  M+G    E+L+HETMQRFVSPV A +E D+Y EY
Sbjct:  262 EMHASFVWLFQQVFSQTPTLMVYVMILLANFTVYSLGHNAAIAAAPPPGIYSSATETSISVEEVQNHNDKLDNTQFDSSTSKSFSVNGNVNGKTTSIGGNNGGGGKARPVGSGTEGDGRFDG---MDQYRTIVPDGASQLSSLGTTTEAESVSGQESREEELAVWNSIVEEAHEMRGN--HEALNHETMQRFVSPVVANMEGDDYEEY 464

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. P. persica 1.0 peptide
Match: ppa005392m ()

HSP 1 Score: 70.0922 bits (170), Expect = 9.072e-13
Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = -3

Query:    7 VWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEYLGRD 153
            +W+S+VEEA+ MQ ELRDE+LDHET+Q+FVSPVT  +E D Y EY   D
Sbjct:  298 LWNSVVEEASRMQAELRDEALDHETLQQFVSPVTVNVEPDYYDEYFRTD 346

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
Match: B9HP57|B9HP57_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_723097 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.291e-35
Identity = 96/209 (45.93%), Postives = 117/209 (55.98%), Query Frame = -3

Query:    7 ESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPE-----------TRRXXXXXXXXXXXXLGVWHSIVEEATGMQ-GELRDESLDHETMQRFVSPVTAKIESDEYAEYLGRD 597
            E HASFV LF  VFSHTPTLMVYVM+LLA ++V+SM+ N A+AAP    SY A TES+SV E      K QKFD                           K RP+AS T+G+G FD S   N  R+++P+                          L +W+SIVEEA+ MQ   LRDESLDHET+QRFVSP+ AKIE+D+YAEY   D
Sbjct:  257 EMHASFVWLFQQVFSHTPTLMVYVMILLANFTVHSMANNAALAAPPNSGSYAATTESISVVETP--DQKNQKFDSSSVKMFSVSSSSGKTTSIGGNNGGGGKVRPLASGTEGDGWFDQS---NQIRTIVPDGASQLSSLGTSREAESASEQVSREEELSLWNSIVEEASKMQYFPLRDESLDHETIQRFVSPINAKIEADDYAEYFRTD 460

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
Match: B9GIJ2|B9GIJ2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_797640 PE=4 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.223e-33
Identity = 92/208 (44.23%), Postives = 114/208 (54.81%), Query Frame = -3

Query:    7 ESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPE-----------TRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEYLGRD 597
            E HASFV LF  VFSHTPTLMVYVM+LLA ++V+SM+ N AIAAP    SY A TESVSV E+     K QKF                            K RPVAS T+G+G FD S   +  R+++P+                          L +W+SIV+EA+ MQ  LRD SLDHET  RFVSP++AKIE+D+Y +Y   D
Sbjct:  228 EMHASFVWLFQQVFSHTPTLMVYVMILLANFTVHSMANNTAIAAPPNTGSYAATTESVSVVEN--LDQKNQKFYSSSVKTFSVPSSSGKTTSIGGNNGGGGKVRPVASGTEGDGWFDQS---SQFRTIVPDGASQLSSLGTSREAESVSEQVSGAEELSLWNSIVDEASKMQSSLRDVSLDHETTHRFVSPISAKIEADDYEDYFRTD 430

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
Match: B9SI00|B9SI00_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0611630 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.061e-27
Identity = 82/203 (40.39%), Postives = 104/203 (51.23%), Query Frame = -3

Query:   16 ESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPETRRXXXXXXXXXXXXLG---------VWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEYL 597
            E HASFV LF  VFSHTPTLMVYVM+LLA ++VYSM  N+AIAA     +Y   TESV + +  +  +  + F                            K RPV S TD  G FD S   N  R+++P+                G         +W+SIV+EA  MQ  LRD SLD ET+QRFVSP+ A +E D+Y+ YL
Sbjct:  237 EMHASFVWLFQQVFSHTPTLMVYVMILLANFTVYSMGSNIAIAASPPPAAYATATESVEIRDQKFDSSSVKTF------LVSSSSDGKSTSIGGSNGSGGGKIRPVGSGTD--GWFDGS---NQFRTIVPDGASQLSSPGEAEESVSGQETREEESSLWNSIVDEAWKMQASLRDGSLDRETVQRFVSPIKAIVEPDDYSAYL 428

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
Match: D7SK06|D7SK06_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024773001 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.467e-25
Identity = 83/204 (40.69%), Postives = 102/204 (50.00%), Query Frame = -3

Query:   19 ESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAI-AAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPE--------TRRXXXXXXXXXXXXLGV--WHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 597
            E HASFV LF  VFSHTPTLMVYVM+LLA ++VYS++ N AI A+P   PS  A T                                                      TDG+GRFD S    +H++++P+        T R              V  W+SIV+EA+ MQ  LRDESLDHETMQRFVSPV AKIE+D+YA+Y
Sbjct:  203 EMHASFVWLFQQVFSHTPTLMVYVMILLANFTVYSIANNTAIAASP--PPSPHAAT---------------------------------------------------IDGTDGDGRFDRS---EFHQTILPDGVSQISIGTTRESESVSGEVTREEEVAHWNSIVDEASKMQAALRDESLDHETMQRFVSPVEAKIEADDYADY 350

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
Match: B7FM44|B7FM44_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.035e-22
Identity = 78/194 (40.21%), Postives = 101/194 (52.06%), Query Frame = -3

Query:   16 HASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGR--FDDSTLLNYHRSVIPETRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEYL 591
            HASFV LF  VFSHTPTLMVYVM+LLA ++V+SMS N AIAA    P   ++ E   V+ D++     +KFD                           KY+PV S  DG+GR  F +  +     + + E                 +W S+VEEA        +E LDHE M++FVSPV+AKIESD+YAEYL
Sbjct:    2 HASFVWLFQQVFSHTPTLMVYVMILLANFTVHSMSSNNAIAAVAPPPETSSIVE---VHNDNHVF---KKFD--SSIIKTFSVNGNNTASVDGGSGRGGKYKPVGSGFDGDGRTGFSNGGVYKTGETEVDEEEETK------------LWESMVEEA-----NRNEEGLDHEAMKQFVSPVSAKIESDDYAEYL 170

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
Match: Q8VZC8|Q8VZC8_ARATH (At1g07280/F22G5_32 OS=Arabidopsis thaliana GN=At1g07280 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.565e-15
Identity = 68/195 (34.87%), Postives = 90/195 (46.15%), Query Frame = -3

Query:   19 RPESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPETRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 603
            R E  ASFV LF  VFS TPTLMV VM+LLA ++VYS+  N A+AA V  P+  + +   +  E S      QKFD                              PV S TDG+G  D      +  S +  T                +W+SI+EE   M      E+LDHETM+  VSPV A++E++E  +Y
Sbjct:  248 RKEMQASFVWLFQQVFSATPTLMVSVMILLANFTVYSIESNSALAAAVSPPTTLSFSFETTA-EISETQETNQKFDSSMVKTFSVSSPYGKTSFVGGGGGNNIP-PPVQSGTDGDGS-DQFRKSQFSSSSLGATSADSDVSVSGQEEIR-LWNSILEETAKM------ETLDHETMKGMVSPVEARLEAEESMDY 432

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
Match: D7KH07|D7KH07_ARALY (Binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470745 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.943e-15
Identity = 66/195 (33.85%), Postives = 89/195 (45.64%), Query Frame = -3

Query:   19 RPESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPETRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 603
            R E  ASFV LF  VFS TPTLMV VM+LLA ++VYS+  N A+AA V  P+        +  E S      QKFD                              PV S T+G+G  D      +  S +  T                +W+SI+EE   M      E+LDH+TM++ VSPV A++E++E  +Y
Sbjct:  241 RKEMQASFVWLFQQVFSATPTLMVSVMILLANFTVYSIESNSALAAAVSPPTTTLSFSFETTSELSETQEINQKFDSSMVKTFSVSSPYGKTSFVGGGGGNNIP-PPVQSGTEGDGS-DQFKKSQFSSSSLGATSADSDVSVSGQEEIR-LWNSILEETEKM------ETLDHDTMKQLVSPVEARLEAEESMDY 426

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
Match: D7LNA2|D7LNA2_ARALY (Binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485085 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.770e-14
Identity = 63/197 (31.98%), Postives = 91/197 (46.19%), Query Frame = -3

Query:   19 RPESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTL--LNYHRSVIPETRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 603
            + E HAS + +F  VFS TPTLMVYVM+LLA Y+V+S++ N+AIAA    P    +T+ V           Q++ D                              P+ S  DG+       L  +N+ +     T R            + +W+S+VEEA  MQ    D ++D +   R VSP+TA+IE D+YA Y
Sbjct:  248 KKEMHASLLWIFQRVFSQTPTLMVYVMILLANYTVHSVASNLAIAA--APPHSDVVTKGVD--------RIQERIDLG----------------------------PLVSGRDGKELHGSKWLGSMNFDKVSHLPTHRDSVSGEGMREEEVSLWNSMVEEADQMQ----DSTVDRKMRLRLVSPITARIEVDDYANY 402

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
Match: Q9LNU7|Q9LNU7_ARATH (F22G5.38 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.018e-14
Identity = 66/190 (34.74%), Postives = 88/190 (46.32%), Query Frame = -3

Query:   19 ASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPETRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 588
            ASFV LF  VFS TPTLMV VM+LLA ++VYS+  N A+AA V  P+  + +   +  E S      QKFD                              PV S TDG+G  D      +  S +  T                +W+SI+EE   M      E+LDHETM+  VSPV A++E++E  +Y
Sbjct:    3 ASFVWLFQQVFSATPTLMVSVMILLANFTVYSIESNSALAAAVSPPTTLSFSFETTA-EISETQETNQKFDSSMVKTFSVSSPYGKTSFVGGGGGNNIP-PPVQSGTDGDGS-DQFRKSQFSSSSLGATSADSDVSVSGQEEIR-LWNSILEETAKM------ETLDHETMKGMVSPVEARLEAEESMDY 182

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
Match: Q5N7T3|Q5N7T3_ORYSJ (Os01g0855200 protein OS=Oryza sativa subsp. japonica GN=B1096A10.34 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.149e-14
Identity = 67/208 (32.21%), Postives = 100/208 (48.08%), Query Frame = -3

Query:   19 ESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPETRR--------------XXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESL-DHETMQRFVSPVTAKIESDEYAEY 597
            E HASFV LF H+FS TP LMV VM+LLA ++VYSM  +VA AA +  P   A T ++   + + + +  Q+FD                           K RPVA  T G+GR D+ +      +V+P+                             L +W  I +EAT MQ  +R E+L D +T+ + V+PV AK+++++ AE+
Sbjct:  200 EMHASFVWLFQHIFSGTPALMVSVMLLLANFTVYSMGDSVAAAATLPPPQPPAATVAMVDTQHAEQSHSHQRFD----HASLKTLSIGRTASVGGNSGGGGKVRPVAGAT-GDGRSDEWS-NRQSGAVLPQDASQGTPGAGAEEAVPVSEAMAVEETEDELVIWKRIADEATRMQASVRAEALMDPDTLGQLVAPVEAKLDTEDTAEF 401

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. Vitis vinifera peptide
Match: GSVIVT01024773001 (assembled CDS)

HSP 1 Score: 117.472 bits (293), Expect = 4.237e-27
Identity = 83/204 (40.69%), Postives = 102/204 (50.00%), Query Frame = -3

Query:   19 ESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAI-AAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPE--------TRRXXXXXXXXXXXXLGV--WHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 597
            E HASFV LF  VFSHTPTLMVYVM+LLA ++VYS++ N AI A+P   PS  A T                                                      TDG+GRFD S    +H++++P+        T R              V  W+SIV+EA+ MQ  LRDESLDHETMQRFVSPV AKIE+D+YA+Y
Sbjct:  203 EMHASFVWLFQQVFSHTPTLMVYVMILLANFTVYSIANNTAIAASP--PPSPHAAT---------------------------------------------------IDGTDGDGRFDRS---EFHQTILPDGVSQISIGTTRESESVSGEVTREEEVAHWNSIVDEASKMQAALRDESLDHETMQRFVSPVEAKIEADDYADY 350

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. Vitis vinifera peptide
Match: GSVIVT01032859001 (assembled CDS)

HSP 1 Score: 58.5362 bits (140), Expect = 2.336e-9
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = -3

Query:    7 VWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEYLGRD 153
            +W+S+VEEA+ M  E   E+LDHET+QR VSPV  ++E+D+Y EY   D
Sbjct:  152 LWNSVVEEASRMAAESGAEALDHETIQRMVSPVGVELEADDYIEYFRTD 200

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TAIR peptide
Match: AT2G29670.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:12682309-12684745 REVERSE LENGTH=536)

HSP 1 Score: 87.4261 bits (215), Expect = 6.754e-18
Identity = 71/202 (35.15%), Postives = 93/202 (46.04%), Query Frame = -3

Query:   19 RPESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFD-XXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPE------TRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 603
            R E   SFV LF  VFS TPTLMVYVM+LLA ++VYS+ GN + A   + P    +TE  +V E         KFD                              +PV S TDG+G    S      R++IPE      +                +W+S+VEEA  MQ    D+SLD ET +RFVS V A++E++E   Y
Sbjct:  224 REEMQQSFVWLFQQVFSATPTLMVYVMILLANFTVYSI-GNNSSALAAVAPLPPTITELTTVSE---TEETNVKFDSSVVKTFFVSSPSGSIASVGGNNNGGGGNVKPVLSGTDGDG----SDGSEQFRTIIPEGVSQLSSSNFGSEPSVSGQDEHRLWNSMVEEAERMQYSNIDDSLDQETRKRFVSHVEARVEAEEDTGY 417

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TAIR peptide
Match: AT1G07280.3 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:2238505-2240991 FORWARD LENGTH=552)

HSP 1 Score: 85.5001 bits (210), Expect = 2.566e-17
Identity = 68/195 (34.87%), Postives = 90/195 (46.15%), Query Frame = -3

Query:   19 RPESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPETRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 603
            R E  ASFV LF  VFS TPTLMV VM+LLA ++VYS+  N A+AA V  P+  + +   +  E S      QKFD                              PV S TDG+G  D      +  S +  T                +W+SI+EE   M      E+LDHETM+  VSPV A++E++E  +Y
Sbjct:  248 RKEMQASFVWLFQQVFSATPTLMVSVMILLANFTVYSIESNSALAAAVSPPTTLSFSFETTA-EISETQETNQKFDSSMVKTFSVSSPYGKTSFVGGGGGNNIP-PPVQSGTDGDGS-DQFRKSQFSSSSLGATSADSDVSVSGQEEIR-LWNSILEETAKM------ETLDHETMKGMVSPVEARLEAEESMDY 432

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TAIR peptide
Match: AT1G07280.2 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:2238505-2240991 FORWARD LENGTH=552)

HSP 1 Score: 85.5001 bits (210), Expect = 2.566e-17
Identity = 68/195 (34.87%), Postives = 90/195 (46.15%), Query Frame = -3

Query:   19 RPESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPETRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 603
            R E  ASFV LF  VFS TPTLMV VM+LLA ++VYS+  N A+AA V  P+  + +   +  E S      QKFD                              PV S TDG+G  D      +  S +  T                +W+SI+EE   M      E+LDHETM+  VSPV A++E++E  +Y
Sbjct:  248 RKEMQASFVWLFQQVFSATPTLMVSVMILLANFTVYSIESNSALAAAVSPPTTLSFSFETTA-EISETQETNQKFDSSMVKTFSVSSPYGKTSFVGGGGGNNIP-PPVQSGTDGDGS-DQFRKSQFSSSSLGATSADSDVSVSGQEEIR-LWNSILEETAKM------ETLDHETMKGMVSPVEARLEAEESMDY 432

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TAIR peptide
Match: AT1G07280.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:2238505-2240991 FORWARD LENGTH=552)

HSP 1 Score: 85.5001 bits (210), Expect = 2.566e-17
Identity = 68/195 (34.87%), Postives = 90/195 (46.15%), Query Frame = -3

Query:   19 RPESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAAPVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHRSVIPETRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 603
            R E  ASFV LF  VFS TPTLMV VM+LLA ++VYS+  N A+AA V  P+  + +   +  E S      QKFD                              PV S TDG+G  D      +  S +  T                +W+SI+EE   M      E+LDHETM+  VSPV A++E++E  +Y
Sbjct:  248 RKEMQASFVWLFQQVFSATPTLMVSVMILLANFTVYSIESNSALAAAVSPPTTLSFSFETTA-EISETQETNQKFDSSMVKTFSVSSPYGKTSFVGGGGGNNIP-PPVQSGTDGDGS-DQFRKSQFSSSSLGATSADSDVSVSGQEEIR-LWNSILEETAKM------ETLDHETMKGMVSPVEARLEAEESMDY 432

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TAIR peptide
Match: AT3G47080.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:17338415-17340129 REVERSE LENGTH=515)

HSP 1 Score: 77.0258 bits (188), Expect = 9.128e-15
Identity = 66/198 (33.33%), Postives = 89/198 (44.95%), Query Frame = -3

Query:   19 RPESHASFVGLFLHVFSHTPTLMVYVMVLLAYYSVYSMSGNVAIAA--PVLQPSYGAMTESVSVYEDSYRHNKQQKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRPVASNTDGEGRFDDSTLLNYHR-SVIPETRRXXXXXXXXXXXXLGVWHSIVEEATGMQGELRDESLDHETMQRFVSPVTAKIESDEYAEY 603
            + E HAS + +F  VFS TPTLMVYVM+LLA Y+V+S++ N+ IAA  PV+        + +    D     +  K D                                 S   G   FD  + L  HR SV  E  R            + +W+S+VEEA  MQ    D S+D +   R VSP+TA+IE D+YA Y
Sbjct:  249 KKEMHASLLWIFQRVFSQTPTLMVYVMILLANYTVHSVASNLPIAASPPVVNKGPDQTQQRI----DFSSLKESTKLD--------------------------------GSKWLGSINFDKVSHLPRHRDSVSGEGMR---------EEEVSLWNSMVEEADQMQ----DSSVDRDMRLRLVSPITARIELDDYANY 397

The following BLAST results are available for this feature:

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. Populus trichocarpa peptide v2.0
BLAST of Vaccinium_corymbosum_v1_Contig23 vs. P. persica 1.0 peptide
BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
BLAST of Vaccinium_corymbosum_v1_Contig23 vs. Vitis vinifera peptide
BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TAIR peptide

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0009s04880.1	4.324e-37	45.93	[more]
POPTR_0001s25720.1	1.817e-35	44.23	[more]
POPTR_0010s19900.1	1.599e-15	32.00	[more]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa003334m	4.481e-28	39.42		[more]
ppa005392m	9.072e-13	63.27		[more]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9HP57\|B9HP57_POPTR	5.291e-35	45.93	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GIJ2\|B9GIJ2_POPTR	2.223e-33	44.23	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SI00\|B9SI00_RICCO	4.061e-27	40.39	Putative uncharacterized protein OS=Ricinus commun...	[more]
D7SK06\|D7SK06_VITVI	8.467e-25	40.69	Whole genome shotgun sequence of line PN40024, sca...	[more]
B7FM44\|B7FM44_MEDTR	1.035e-22	40.21	Putative uncharacterized protein OS=Medicago trunc...	[more]
Q8VZC8\|Q8VZC8_ARATH	3.565e-15	34.87	At1g07280/F22G5_32 OS=Arabidopsis thaliana GN=At1g...	[more]
D7KH07\|D7KH07_ARALY	7.943e-15	33.85	Binding protein OS=Arabidopsis lyrata subsp. lyrat...	[more]
D7LNA2\|D7LNA2_ARALY	1.770e-14	31.98	Binding protein OS=Arabidopsis lyrata subsp. lyrat...	[more]
Q9LNU7\|Q9LNU7_ARATH	3.018e-14	34.74	F22G5.38 OS=Arabidopsis thaliana PE=4 SV=1	[more]
Q5N7T3\|Q5N7T3_ORYSJ	5.149e-14	32.21	Os01g0855200 protein OS=Oryza sativa subsp. japoni...	[more]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01024773001	4.237e-27	40.69	assembled CDS	[more]
GSVIVT01032859001	2.336e-9	53.06	assembled CDS	[more]

BLAST of Vaccinium_corymbosum_v1_Contig23 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G29670.1	6.754e-18	35.15	\| Symbols: \| Tetratricopeptide repeat (TPR)-like ...	[more]
AT1G07280.3	2.566e-17	34.87	\| Symbols: \| Tetratricopeptide repeat (TPR)-like ...	[more]
AT1G07280.2	2.566e-17	34.87	\| Symbols: \| Tetratricopeptide repeat (TPR)-like ...	[more]
AT1G07280.1	2.566e-17	34.87	\| Symbols: \| Tetratricopeptide repeat (TPR)-like ...	[more]
AT3G47080.1	9.128e-15	33.33	\| Symbols: \| Tetratricopeptide repeat (TPR)-like ...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 22..37 score
None	No IPR available	SEG	seg	seg	coord: 50..68 score
None	No IPR available	SEG	seg	seg	coord: 86..113 score: NAcoord: 146..158 score
None	No IPR available	SEG	seg	seg	coord: 8..22 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Vaccinium_corymbosum_v1_Contig23 ID=Vaccinium_corymbosum_v1_Contig23; Name=Vaccinium_corymbosum_v1_Contig23; organism=Vaccinium corymbosum; type=contig; length=632bp
AGCGTGGTCGCGGCCGAGGTACTCCGCATACTCATCCGATTCAATTTTCG
CCGTCACGGGGGAAACAAACCTCTGCATCGTTTCGTGATCCAACGACTCG
TCTCTCAACTCCCCCTGCATTCCCGTTGCTTCTTCCACTATCGAATGCCA
TACTCCCAACTCCTCTTCTACTTGTTCCGATACTAATTCCTCCTCCCTCC
TCGTCTCGGGAATTACGCTACGATGATAGTTCAATAAAGTTGAGTCATCG
AAACGCCCCTCGCCATCTGTATTACTCGCAACTGGCCGGTATTTTCCCCC
ACCGCCATTGTTTCCTCCTATCGAGGTCGTCTTTCCGCTAGAAGATGAAA
TCGAAAACGTCTTAATTTTCGTAGAATCAAACTTCTGTTGCTTATTATGA
CGATAAGAATCTTCGTAAACTGAAACAGACTCGGTCATAGCACCGTAAGA
TGGTTGCAAGACCGGTGCAGCAATCGCAACATTACCACTCATCGAATACA
CGCTATAATACGCAAGCAAAACCATAACGTACACCATGAGAGTCGGCGTG
TGCGAGAAAACATGTAGGAACAACCCCACGAACGAGGCGTGGGATTCCGG
CCTGCCCTCCGAAGCCGGAATCCCGTGCCGGT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated