Vaccinium_corymbosum_v1_Contig345

Contig Overview
NameVaccinium_corymbosum_v1_Contig345
Unique NameVaccinium_corymbosum_v1_Contig345
Typecontig
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length632
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GW397267GW397267Vaccinium corymbosumEST
GW397264GW397264Vaccinium corymbosumEST
HO762513HO762513Vaccinium corymbosumEST
HO762512HO762512Vaccinium corymbosumEST
HO762508HO762508Vaccinium corymbosumEST
CV091139CV091139Vaccinium corymbosumEST
GW397268GW397268Vaccinium corymbosumEST


Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GW397267ESTGW397267:37..336 +
GW397264ESTGW397264:47..336 +
HO762513ESTHO762513:297..571 -
HO762512ESTHO762512:422..571 -
HO762508ESTHO762508:298..571 -
CV091139ESTCV091139:1..634 +
GW397268ESTGW397268:422..604 +
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10no descriptioncoord: 22..95
score: 2.4
NoneNo IPR availableSEGsegsegcoord: 18..27
score

Sequences
The following sequences are available for this feature:

contig sequence

>Vaccinium_corymbosum_v1_Contig345 ID=Vaccinium_corymbosum_v1_Contig345; Name=Vaccinium_corymbosum_v1_Contig345; organism=Vaccinium corymbosum; type=contig; length=632bp
GCACGTAAACTAGAGTGAGAGAGATGGCCTTATTTGCGAATCCGGAAGGA
ATGGTGACTAATGTTCCCGACGATATTTTGACAACCGCAAAGTTTGCTGT
GGAAAGCGTAAACGAGGATCAGAATACTAAATATGTGTTTGAGCACGTTG
CCTGTTACTGGCCGAAGACCTCGGGACATCGCTTTTATATGGTCATACAA
GTAAGTGATCGTAACGATACAGATGTTTTTTCGGTGGTAGTCCACGAGAA
TGCCAATACACTCCAGAAGAAGGTGGAACAGTTCAGATCCGTCTTTGAAG
TCAATAAACAGGAGGACTAAAGACGGGCTGGTACTTCCGGAGCTGCTTGA
ATAAATGTGTTGGCAAGTACAATAAGTGGCCTTCAGACCCTGATGGAATA
CTTATTATCTATCTTTAGTACTGTTGGTTTGTAATAATAATTGCGGCTTT
AGCCCAGACTTGTGCTTTTGTTTGTGTGGGGATTTATAGATCCCGATGTT
ATTACTTTAAGACTTATTAATTCCATCATTGTATATATGGCATGGCCACA
AAAAACCTCCGGATGATGTACCTGCGAATTTGTTTTATTTAAGGCGTGTT
TAAAATTTATAATACCTCTGTTTTATAGTGCT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated