Vaccinium_corymbosum_v1_Contig349

Contig Overview


Name	Vaccinium_corymbosum_v1_Contig349
Unique Name	Vaccinium_corymbosum_v1_Contig349
Type	contig
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	796

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CV090417	EST	CV090417:1..698 +	Vaccinium corymbosum unigene v1	n/a
CV091125	EST	CV091125:1..796 +	Vaccinium corymbosum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
CV090417	CV090417	Vaccinium corymbosum	EST
CV091125	CV091125	Vaccinium corymbosum	EST

Homology

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. DB:swissprot:display
Match: GAT26_ARATH (GATA transcription factor 26 OS=Arabidopsis thaliana GN=GATA26 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.957e-18
Identity = 67/169 (39.64%), Postives = 93/169 (55.03%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSS-VKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSNAIASGKPTN---VKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQD-LLLDVPSNNSFPQAELLY 493
            Q+L+A+GVFD+S SS  K EE  T  +LAL + +KS+ VE YNLLK+   +    G  V   S +     P N   +KR  + Q Q     +  ++ PKR+ K    +     +N+ SCF PRSL +            ++  + SSDQD LLLD+PSN SFPQAELL+
Sbjct:  347 QQLIADGVFDVSSSSGAKLEEIRTFKKLALTDFNKSRLVESYNLLKE---REKGTGDSVTTTSKSSIPNVPKNIVTIKRRYENQIQVKSESRGLMRSPKRVMK---MKASHETENNVSCFRPRSLASVFAQEGGSAVFSYE-GNCSSDQDLLLLDLPSNGSFPQAELLH 508

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. DB:swissprot:display
Match: GAT27_ARATH (GATA transcription factor 27 OS=Arabidopsis thaliana GN=GATA27 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.025e-13
Identity = 57/169 (33.73%), Postives = 87/169 (51.48%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLK-----DGKCQSANRGSVVQGGSNAIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDES-SDQDLLLDVPSNNSFPQAELL 490
            Q+L+A+GVF+ + S  K E+  TL +LAL + +KS  +E Y +LK     D    ++   S+    +N++ +     ++R  +   Q+F   +  ++ PK + K      +E ++N  S F P S               F + D   SDQDLLLDVPSN SFPQAELL
Sbjct:  313 QQLVADGVFETNSSYAKLEDIKTLAKLALSDPNKSHLLESYYMLKRREIEDCVTTTSRVSSLSPSNNNSLVT-----IERPCESLNQNFSETRGVMRSPKEVMKIRSKHTEENLENSVSSFKPVSC---------GGPLVFSYEDNDISDQDLLLDVPSNGSFPQAELL 467

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s08080.2 ()

HSP 1 Score: 174.096 bits (440), Expect = 9.086e-44
Identity = 99/189 (52.38%), Postives = 113/189 (59.79%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSN--AIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLLDVPSNNSFPQAELLYPXXXXXXXXXXXXXXIQPQLVRP 562
            Q+LL+EGVFDLSFS  K E+C TL RL L N  KSKWVE+Y+LLK  KC+++N  S V  G N   +A       KR RD   Q F   K+ +K PKRI     YENKEL+DNDGSCFSPRSLFA              F+DESSDQDLLLD+PSN SF QAEL YP              I P L RP
Sbjct:  351 QQLLSEGVFDLSFSEAKTEDCKTLKRLTLSNFLKSKWVERYHLLK--KCKNSNGKSFVGKGPNPDVVAMSNIAGAKRSRDSPSQKFSEVKL-MKSPKRIIMKATYENKELIDNDGSCFSPRSLFALPTDGSSLMLDSLHFVDESSDQDLLLDIPSNGSFAQAELFYPTNSFGQQASTSSSSIYPHLGRP 536

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s08080.1 ()

HSP 1 Score: 174.096 bits (440), Expect = 9.086e-44
Identity = 99/189 (52.38%), Postives = 113/189 (59.79%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSN--AIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLLDVPSNNSFPQAELLYPXXXXXXXXXXXXXXIQPQLVRP 562
            Q+LL+EGVFDLSFS  K E+C TL RL L N  KSKWVE+Y+LLK  KC+++N  S V  G N   +A       KR RD   Q F   K+ +K PKRI     YENKEL+DNDGSCFSPRSLFA              F+DESSDQDLLLD+PSN SF QAEL YP              I P L RP
Sbjct:  355 QQLLSEGVFDLSFSEAKTEDCKTLKRLTLSNFLKSKWVERYHLLK--KCKNSNGKSFVGKGPNPDVVAMSNIAGAKRSRDSPSQKFSEVKL-MKSPKRIIMKATYENKELIDNDGSCFSPRSLFALPTDGSSLMLDSLHFVDESSDQDLLLDIPSNGSFAQAELFYPTNSFGQQASTSSSSIYPHLGRP 540

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s15170.1 ()

HSP 1 Score: 165.236 bits (417), Expect = 4.221e-41
Identity = 94/167 (56.29%), Postives = 111/167 (66.47%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSN--AIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLLDVPSNNSFPQAELLYP 496
            Q+LL+EGVFDLS  + K+E+C TL RL L NLSKSKWVE+Y+LLK  KC+++   S+V  G N   +AS      KR RD   Q F   K ++K PKRI     YE KEL+DNDGSCFSPRSLFA              F+DESSDQDLLLD+PSN SF QAELLYP
Sbjct:  367 QQLLSEGVFDLSLEA-KSEDCKTLKRLTLSNLSKSKWVERYHLLK--KCKNSTGKSLVGKGPNPNVVASSNLIGAKRSRDNLSQKFSEAK-SMKSPKRIVMKATYEIKELIDNDGSCFSPRSLFALPPDGSSLMLDSLHFVDESSDQDLLLDIPSNGSFAQAELLYP 529

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. P. persica 1.0 peptide
Match: ppa003888m ()

HSP 1 Score: 175.252 bits (443), Expect = 2.872e-44
Identity = 95/165 (57.58%), Postives = 114/165 (69.09%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSNAIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLLDVPSNNSFPQAELLYP 496
            Q+LLAEGVFD+SF   K E+C TL RL L N SKSKWVE+Y+LLK  KC+++   SV+ G  N +AS    +VKRLRD + QSFP  K+ +K PKRI   G  ENK+L+D DGSCFSPRSLFA              F+DESSDQDLLL +PSN SF QAELL+P
Sbjct:  358 QQLLAEGVFDISFLGAKTEDCKTLKRLVLSNSSKSKWVERYHLLK--KCKTSPGKSVISG-PNTLASSNFRHVKRLRDSETQSFPDVKMMMKSPKRIIVKGSNENKDLMDYDGSCFSPRSLFALPADGSSFLMESMNFVDESSDQDLLLHLPSNGSFAQAELLHP 519

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
Match: B9N2W6|B9N2W6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1114184 PE=4 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.244e-41
Identity = 99/189 (52.38%), Postives = 113/189 (59.79%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSN--AIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLLDVPSNNSFPQAELLYPXXXXXXXXXXXXXXIQPQLVRP 562
            Q+LL+EGVFDLSFS  K E+C TL RL L N  KSKWVE+Y+LLK  KC+++N  S V  G N   +A       KR RD   Q F   K+ +K PKRI     YENKEL+DNDGSCFSPRSLFA              F+DESSDQDLLLD+PSN SF QAEL YP              I P L RP
Sbjct:  351 QQLLSEGVFDLSFSEAKTEDCKTLKRLTLSNFLKSKWVERYHLLK--KCKNSNGKSFVGKGPNPDVVAMSNIAGAKRSRDSPSQKFSEVKL-MKSPKRIIMKATYENKELIDNDGSCFSPRSLFALPTDGSSLMLDSLHFVDESSDQDLLLDIPSNGSFAQAELFYPTNSFGQQASTSSSSIYPHLGRP 536

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
Match: A9PFA9|A9PFA9_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.244e-41
Identity = 99/189 (52.38%), Postives = 113/189 (59.79%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSN--AIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLLDVPSNNSFPQAELLYPXXXXXXXXXXXXXXIQPQLVRP 562
            Q+LL+EGVFDLSFS  K E+C TL RL L N  KSKWVE+Y+LLK  KC+++N  S V  G N   +A       KR RD   Q F   K+ +K PKRI     YENKEL+DNDGSCFSPRSLFA              F+DESSDQDLLLD+PSN SF QAEL YP              I P L RP
Sbjct:  355 QQLLSEGVFDLSFSEAKTEDCKTLKRLTLSNFLKSKWVERYHLLK--KCKNSNGKSFVGKGPNPDVVAMSNIAGAKRSRDSPSQKFSEVKL-MKSPKRIIMKATYENKELIDNDGSCFSPRSLFALPTDGSSLMLDSLHFVDESSDQDLLLDIPSNGSFAQAELFYPTNSFGQQASTSSSSIYPHLGRP 540

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
Match: B9SYZ6|B9SYZ6_RICCO (GATA transcription factor, putative OS=Ricinus communis GN=RCOM_0120660 PE=4 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 3.620e-41
Identity = 96/187 (51.34%), Postives = 117/187 (62.57%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSNAIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLLDVPSNNSFPQAELLYPXXXXXXXXXXXXXXIQPQLVRP 562
            Q+LLAEGVFD+SFS  KAE+C+TL RL L NLSKSKWVE Y  LK  KC+++N  S+V  G   ++S    + KR RD   Q +   K T+K PKRI+    YENKEL+++DG+CFSPRSLFA               +DESSDQDLLLDVPSN SF QAELL+P                P L+RP
Sbjct:  359 QQLLAEGVFDISFSEAKAEDCNTLKRLTLSNLSKSKWVEHYTQLK--KCRNSNEKSLVGRGPTVVSSSNSVSGKRSRDSIGQKYIEVK-TMKSPKRISMKATYENKELMESDGTCFSPRSLFALPPDGGSFMLDSLHCVDESSDQDLLLDVPSNGSFAQAELLHPALSFGQQASTSSSSTYPHLLRP 542

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
Match: A5B7D8|A5B7D8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006083 PE=4 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 4.002e-40
Identity = 93/165 (56.36%), Postives = 109/165 (66.06%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSNAIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLLDVPSNNSFPQAELLYP 496
            Q+LL EGVFD+SF  VKAE+C TL RLAL N  KSKWVE YNLLK  KC+++   SVV G   AIA+    N KR RD Q Q+F   + T+K P+R+    +   KE +DN+GS FSPRSLFA            F F DE SD DLLLDVPSNNSFPQAELL+P
Sbjct:  359 QQLLGEGVFDISFPGVKAEDCKTLQRLALLNSEKSKWVEHYNLLK--KCKNSTGVSVVAGEPKAIAASNFANAKRSRDAQNQNFSEARTTMKSPRRVIMKAV--EKEHIDNEGSSFSPRSLFALPPDGGSLELDSFTFGDEISDHDLLLDVPSNNSFPQAELLHP 519

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
Match: B9MUU8|B9MUU8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589916 PE=4 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 5.779e-39
Identity = 94/167 (56.29%), Postives = 111/167 (66.47%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSN--AIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLLDVPSNNSFPQAELLYP 496
            Q+LL+EGVFDLS  + K+E+C TL RL L NLSKSKWVE+Y+LLK  KC+++   S+V  G N   +AS      KR RD   Q F   K ++K PKRI     YE KEL+DNDGSCFSPRSLFA              F+DESSDQDLLLD+PSN SF QAELLYP
Sbjct:  359 QQLLSEGVFDLSLEA-KSEDCKTLKRLTLSNLSKSKWVERYHLLK--KCKNSTGKSLVGKGPNPNVVASSNLIGAKRSRDNLSQKFSEAK-SMKSPKRIVMKATYEIKELIDNDGSCFSPRSLFALPPDGSSLMLDSLHFVDESSDQDLLLDIPSNGSFAQAELLYP 521

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
Match: D7M9I0|D7M9I0_ARALY (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493120 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.363e-16
Identity = 66/169 (39.05%), Postives = 93/169 (55.03%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSS-VKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSNAIASGKPTN---VKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQD-LLLDVPSNNSFPQAELLY 493
            Q+L+A+GVFD+S SS  K E+  T  +LAL + +KS+ VE YNLLK+   +    G  V   S +     P N   +KR  + Q Q     +  ++ PKR+ K    +     +N+ SCF PRSL +            ++  + SSDQD LLLD+PSN SFPQAELL+
Sbjct:  347 QQLIADGVFDVSSSSGAKLEDIRTFKKLALADFNKSRLVESYNLLKE---REKGTGDSVTTTSKSSIPNVPKNIVTIKRRCEDQTQLKSESRGLMRSPKRVMK---MKASHETENNVSCFRPRSLASVFAQEGGSAVFGYE-GNCSSDQDLLLLDLPSNGSFPQAELLH 508

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
Match: Q2A9H0|Q2A9H0_BRAOL (GATA zinc finger containing protein OS=Brassica oleracea GN=27.t00050 PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.978e-16
Identity = 62/169 (36.69%), Postives = 93/169 (55.03%), Query Frame = 2

Query:    2 QKLLAEGVFDL-SFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSNAIASGKPT--NVKRLRDGQPQSFPGKKVTIKVPKRITK-GGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLL-DVPSNNSFPQAELLY 493
            Q+L+ +GVF++ S S  K E+     +LAL + +KS+ VE YN LK+ +  + +  +     S+   +   T   +K+  + Q Q     +  ++ PK +TK     E+K L +N+GSCFSPRSL +                + SSDQDLLL D+PSN SFPQAELL+
Sbjct:  338 QQLIVDGVFEMPSSSGAKLEDIRAFKKLALSDFNKSRLVESYNHLKEREKGTGDSVTTTTSRSSLNPNVPKTIVTIKKHCENQTQLKSESRGLMRSPKSVTKMKASDESKVLTENNGSCFSPRSLASVFAQESGGITLFGNENNCSSDQDLLLMDLPSNGSFPQAELLH 506

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
Match: D7MPX3|D7MPX3_ARALY (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_356279 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.447e-13
Identity = 62/172 (36.05%), Postives = 91/172 (52.91%), Query Frame = 2

Query:    2 QKLLAEGVFDL--SFSS-VKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSNAIASGKPT--NVKRLRDGQPQSFPGKKVTIKVPKRITK--GGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDES-SDQDLLLDVPSNNSFPQAELLY 493
            Q+L+A+GVF+   S+SS  K E+  TL +LAL +  KS  +E Y +LK+ K ++ +  +     SN   S   +   ++R  +   Q+F   +  ++ PK + K      E KE+++N  S F P S               F + D   SDQDLLLDVPSN SFPQAELL+
Sbjct:  313 QQLVADGVFETTSSYSSGSKLEDIKTLAKLALSDPYKSHLLESYYMLKEQKKRTEDSVTTTSKVSNLSPSKNNSLVTIERPCESLNQNFSETRDVMRSPKEVMKIRSKHIETKEILENSVSSFKPMSC---------GGPLVFSYEDNDISDQDLLLDVPSNGSFPQAELLH 475

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
Match: Q2A9L7|Q2A9L7_BRAOL (GATA zinc finger containing protein OS=Brassica oleracea GN=26.t00066 PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.585e-12
Identity = 60/170 (35.29%), Postives = 88/170 (51.76%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSV--KAEECSTLNRLALCNLSKSKWVEQYNLLKDGK--CQSANRGSVVQGGSNAIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITK--GGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLLDVPSNNSFPQAELLY 493
            Q+L+A+GVF  S SS   K EE  TL +LAL + +KS  +E Y +LK+ +   + ++R S      N     +   ++R  +   Q+F   +V  K PK + K      E KE+++N  S  +  S                   +++SDQDLLLDVPSN SFPQAELL+
Sbjct:  311 QQLVADGVFGTSTSSPGSKLEEFKTLAKLALSDPNKSHMLESYQMLKEQRKGIEDSSRVSNQTPSDN----NRLVTIERPCESLNQNFSETRVVTKSPKEVMKIRSKHIETKEIIENSVSSLNHLSYSGSMVCGGYED-------NDNSDQDLLLDVPSNGSFPQAELLH 469

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
Match: Q0WVU5|Q0WVU5_ARATH (Putative uncharacterized protein At5g47140 OS=Arabidopsis thaliana GN=At5g47140 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.585e-12
Identity = 57/169 (33.73%), Postives = 87/169 (51.48%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLK-----DGKCQSANRGSVVQGGSNAIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDES-SDQDLLLDVPSNNSFPQAELL 490
            Q+L+A+GVF+ + S  K E+  TL +LAL + +KS  +E Y +LK     D    ++   S+    +N++ +     ++R  +   Q+F   +  ++ PK + K      +E ++N  S F P S               F + D   SDQDLLLDVPSN SFPQAELL
Sbjct:  313 QQLVADGVFETNSSYAKLEDIKTLAKLALSDPNKSHLLESYYMLKRREIEDCVTTTSRVSSLSPSNNNSLVT-----IERPCESLNQNFSETRGVMRSPKEVMKIRSKHTEENLENSVSSFKPVSC---------GGPLVFSYEDNDISDQDLLLDVPSNGSFPQAELL 467

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. Vitis vinifera peptide
Match: GSVIVT01005717001 (assembled CDS)

HSP 1 Score: 169.088 bits (427), Expect = 1.754e-42
Identity = 93/165 (56.36%), Postives = 109/165 (66.06%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSNAIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQDLLLDVPSNNSFPQAELLYP 496
            Q+LL EGVFD+SF  VKAE+C TL RLAL N  KSKWVE YNLLK  KC+++   SVV G   AIA+    N KR RD Q Q+F   + T+K P+R+    +   KE +DN+GS FSPRSLFA            F F DE SD DLLLDVPSNNSFPQAELL+P
Sbjct:  132 QQLLGEGVFDISFPGVKAEDCKTLQRLALLNSEKSKWVEHYNLLK--KCKNSTGVSVVAGEPKAIAASNFANAKRSRDAQNQNFSEARTTMKSPRRVIMKAV--EKEHIDNEGSSFSPRSLFALPPDGGSLELDSFTFGDEISDHDLLLDVPSNNSFPQAELLHP 292

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TAIR peptide
Match: AT4G17570.2 (| Symbols: GATA26 | GATA transcription factor 26 | chr4:9784329-9786644 REVERSE LENGTH=526)

HSP 1 Score: 90.8929 bits (224), Expect = 8.810e-19
Identity = 67/169 (39.64%), Postives = 93/169 (55.03%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSS-VKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSNAIASGKPTN---VKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQD-LLLDVPSNNSFPQAELLY 493
            Q+L+A+GVFD+S SS  K EE  T  +LAL + +KS+ VE YNLLK+   +    G  V   S +     P N   +KR  + Q Q     +  ++ PKR+ K    +     +N+ SCF PRSL +            ++  + SSDQD LLLD+PSN SFPQAELL+
Sbjct:  363 QQLIADGVFDVSSSSGAKLEEIRTFKKLALTDFNKSRLVESYNLLKE---REKGTGDSVTTTSKSSIPNVPKNIVTIKRRYENQIQVKSESRGLMRSPKRVMK---MKASHETENNVSCFRPRSLASVFAQEGGSAVFSYE-GNCSSDQDLLLLDLPSNGSFPQAELLH 524

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TAIR peptide
Match: AT4G17570.3 (| Symbols: GATA26 | GATA transcription factor 26 | chr4:9784329-9786974 REVERSE LENGTH=514)

HSP 1 Score: 90.8929 bits (224), Expect = 8.810e-19
Identity = 67/169 (39.64%), Postives = 93/169 (55.03%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSS-VKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSNAIASGKPTN---VKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQD-LLLDVPSNNSFPQAELLY 493
            Q+L+A+GVFD+S SS  K EE  T  +LAL + +KS+ VE YNLLK+   +    G  V   S +     P N   +KR  + Q Q     +  ++ PKR+ K    +     +N+ SCF PRSL +            ++  + SSDQD LLLD+PSN SFPQAELL+
Sbjct:  351 QQLIADGVFDVSSSSGAKLEEIRTFKKLALTDFNKSRLVESYNLLKE---REKGTGDSVTTTSKSSIPNVPKNIVTIKRRYENQIQVKSESRGLMRSPKRVMK---MKASHETENNVSCFRPRSLASVFAQEGGSAVFSYE-GNCSSDQDLLLLDLPSNGSFPQAELLH 512

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TAIR peptide
Match: AT4G17570.1 (| Symbols: GATA26 | GATA transcription factor 26 | chr4:9784329-9786974 REVERSE LENGTH=510)

HSP 1 Score: 90.8929 bits (224), Expect = 8.810e-19
Identity = 67/169 (39.64%), Postives = 93/169 (55.03%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSS-VKAEECSTLNRLALCNLSKSKWVEQYNLLKDGKCQSANRGSVVQGGSNAIASGKPTN---VKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDESSDQD-LLLDVPSNNSFPQAELLY 493
            Q+L+A+GVFD+S SS  K EE  T  +LAL + +KS+ VE YNLLK+   +    G  V   S +     P N   +KR  + Q Q     +  ++ PKR+ K    +     +N+ SCF PRSL +            ++  + SSDQD LLLD+PSN SFPQAELL+
Sbjct:  347 QQLIADGVFDVSSSSGAKLEEIRTFKKLALTDFNKSRLVESYNLLKE---REKGTGDSVTTTSKSSIPNVPKNIVTIKRRYENQIQVKSESRGLMRSPKRVMK---MKASHETENNVSCFRPRSLASVFAQEGGSAVFSYE-GNCSSDQDLLLLDLPSNGSFPQAELLH 508

[Close]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TAIR peptide
Match: AT5G47140.1 (| Symbols: GATA27 | GATA transcription factor 27 | chr5:19145108-19147303 FORWARD LENGTH=470)

HSP 1 Score: 77.411 bits (189), Expect = 1.008e-14
Identity = 57/169 (33.73%), Postives = 87/169 (51.48%), Query Frame = 2

Query:    2 QKLLAEGVFDLSFSSVKAEECSTLNRLALCNLSKSKWVEQYNLLK-----DGKCQSANRGSVVQGGSNAIASGKPTNVKRLRDGQPQSFPGKKVTIKVPKRITKGGLYENKELVDNDGSCFSPRSLFAXXXXXXXXXXXXFQFMDES-SDQDLLLDVPSNNSFPQAELL 490
            Q+L+A+GVF+ + S  K E+  TL +LAL + +KS  +E Y +LK     D    ++   S+    +N++ +     ++R  +   Q+F   +  ++ PK + K      +E ++N  S F P S               F + D   SDQDLLLDVPSN SFPQAELL
Sbjct:  313 QQLVADGVFETNSSYAKLEDIKTLAKLALSDPNKSHLLESYYMLKRREIEDCVTTTSRVSSLSPSNNNSLVT-----IERPCESLNQNFSETRGVMRSPKEVMKIRSKHTEENLENSVSSFKPVSC---------GGPLVFSYEDNDISDQDLLLDVPSNGSFPQAELL 467

The following BLAST results are available for this feature:

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. DB:swissprot:display
BLAST of Vaccinium_corymbosum_v1_Contig349 vs. Populus trichocarpa peptide v2.0
BLAST of Vaccinium_corymbosum_v1_Contig349 vs. P. persica 1.0 peptide
BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
BLAST of Vaccinium_corymbosum_v1_Contig349 vs. Vitis vinifera peptide
BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TAIR peptide

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
GAT26_ARATH	8.957e-18	39.64	GATA transcription factor 26 OS=Arabidopsis thalia...	[more]
GAT27_ARATH	1.025e-13	33.73	GATA transcription factor 27 OS=Arabidopsis thalia...	[more]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0003s08080.2	9.086e-44	52.38	[more]
POPTR_0003s08080.1	9.086e-44	52.38	[more]
POPTR_0001s15170.1	4.221e-41	56.29	[more]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa003888m	2.872e-44	57.58		[more]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9N2W6\|B9N2W6_POPTR	1.244e-41	52.38	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PFA9\|A9PFA9_POPTR	1.244e-41	52.38	Putative uncharacterized protein OS=Populus tricho...	[more]
B9SYZ6\|B9SYZ6_RICCO	3.620e-41	51.34	GATA transcription factor, putative OS=Ricinus com...	[more]
A5B7D8\|A5B7D8_VITVI	4.002e-40	56.36	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9MUU8\|B9MUU8_POPTR	5.779e-39	56.29	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7M9I0\|D7M9I0_ARALY	2.363e-16	39.05	Zinc finger family protein OS=Arabidopsis lyrata s...	[more]
Q2A9H0\|Q2A9H0_BRAOL	8.978e-16	36.69	GATA zinc finger containing protein OS=Brassica ol...	[more]
D7MPX3\|D7MPX3_ARALY	5.447e-13	36.05	Zinc finger family protein OS=Arabidopsis lyrata s...	[more]
Q2A9L7\|Q2A9L7_BRAOL	1.585e-12	35.29	GATA zinc finger containing protein OS=Brassica ol...	[more]
Q0WVU5\|Q0WVU5_ARATH	1.585e-12	33.73	Putative uncharacterized protein At5g47140 OS=Arab...	[more]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01005717001	1.754e-42	56.36	assembled CDS	[more]

BLAST of Vaccinium_corymbosum_v1_Contig349 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT4G17570.2	8.810e-19	39.64	\| Symbols: GATA26 \| GATA transcription factor 26 \|...	[more]
AT4G17570.3	8.810e-19	39.64	\| Symbols: GATA26 \| GATA transcription factor 26 \|...	[more]
AT4G17570.1	8.810e-19	39.64	\| Symbols: GATA26 \| GATA transcription factor 26 \|...	[more]
AT5G47140.1	1.008e-14	33.73	\| Symbols: GATA27 \| GATA transcription factor 27 \|...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 124..135 score: NAcoord: 166..179 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Vaccinium_corymbosum_v1_Contig349 ID=Vaccinium_corymbosum_v1_Contig349; Name=Vaccinium_corymbosum_v1_Contig349; organism=Vaccinium corymbosum; type=contig; length=796bp
CCAGAAGCTGCTTGCAGAAGGGGTTTTTGATCTCTCTTTCTCTTCTGTGA
AAGCTGAAGAATGTAGCACATTGAACAGGCTTGCATTGTGCAATTTGAGC
AAATCAAAGTGGGTGGAACAATATAATCTGCTCAAGGATGGGAAGTGTCA
AAGTGCCAACCGAGGTTCTGTAGTCCAAGGAGGATCTAATGCCATTGCAT
CTGGTAAACCAACAAATGTAAAGAGATTGCGTGATGGCCAGCCTCAATCT
TTTCCAGGGAAAAAAGTAACCATCAAGGTCCCCAAAAGGATTACAAAGGG
TGGTCTCTATGAAAACAAGGAACTCGTAGACAACGATGGCTCTTGCTTTA
GTCCAAGAAGCCTATTTGCATTGCCTCCCGATAGTAGCTCCCTAATGCTC
GACTCTTTCCAGTTTATGGACGAGAGTTCAGACCAAGATCTTTTACTTGA
CGTTCCATCCAACAACTCCTTCCCACAGGCGGAACTCCTCTATCCTGCTT
CCAGTTTCGGTGCCCAAGCAAGCACTAGTAGTAGCTCAATACAACCACAA
CTTGTCCGGCCATGAAATATTCGAAGAAAACACTACATTTAACTAGGCTA
AAATTTGGGATACTACTTTTGAAATGCACTTTGGAATCGAAATAGTTTGG
GCACGGACCATACGAATGCCTTTGTGAAAAAAGGTTTGATGGTGGGTTGA
ATTTTTNCCTTTAAAATGGCNTTTTAAATTGAACTTTGAAGTGNCCAAGG
GGAAANGGTGTTGGGGGTGCTGTTTTTTGTTATANGGTTAACAAAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated