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Contig Overview
Name | Vaccinium_corymbosum_v1_Contig92 |
Unique Name | Vaccinium_corymbosum_v1_Contig92 |
Type | contig |
Organism | Vaccinium corymbosum (northern highbush blueberry) |
Sequence length | 689 |
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
DW043053 | EST | DW043053:1..500 - |
EG026086 | EST | EG026086:52..689 + |
DW043024 | EST | DW043024:52..689 + |
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | SEG | seg | seg | coord: 28..48 score |
None | No IPR available | SEG | seg | seg | coord: 48..88 score |
Sequences
The
following sequences are available for this feature:
contig sequence >Vaccinium_corymbosum_v1_Contig92 ID=Vaccinium_corymbosum_v1_Contig92; Name=Vaccinium_corymbosum_v1_Contig92; organism=Vaccinium corymbosum; type=contig; length=689bp AAAATAAAGCCACTTTATAGATACCATAATACGTAGCACACTACGACATC AAGCCACACAAAACACACAGGTACATCAAACGAAACTCCCAAACAGCAGA ACACAGCTAGCCACAATTACATGTCTATGCACACACCCCAAATGTGCAGA ATGCCACACACAATTACAAACCAGCAAGGATGATCTGGTAACTCCCATGG TAACGATATACTTATAAACTATGGGTTTCCACTGTTGCCTATGTTTCATG GCTTATTTACTTTAGAAGGTGGCGAGAGAGGGATGGTTGAAGGTGGTGAG AGAGGGATGGTGGTCAAGGGTGGGAAGGACGGCACTTTCGGCAAGGAGAT TTTCGGCAGTGGTGGAAGTTTTGGCAGGGATGGTATGGTAGGCATGACGG GCACTGTTGGTGCCAACAAGATGACGGGCCGCATCGCACCTCTCGGTGCT TGCAGCTGCAGAGAACTCCCATGGATGAGTACCTCGCCCCGGCGACCACG CCTATGGGGCGAAATTTCGCGGCCCGCCTAAAATTCAATTTCCGCCCTTA ATAATAGAAACTAAAAATAAAAAATTTCCCTGGGCGCGGTCGTTTTTAAC AAAAGTTTCGTGAAAATGCGTAAAAAAACCCTGGGCGTTTAAACCCAAAC TTTAATTTTGCCCCTTGGCCAATAACATTTTCTCCNTTT back to top
Annotated Terms
The
following terms have been associated with
this contig:
Vocabulary: INTERPRO
Term | Definition |
noIPR | unintegrated |
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