NCSU_Chrom12_44992437

Marker Overview


Name	NCSU_Chrom12_44992437
dbSNP ID	N/A
Type	SNP
SNP Alleles	A/C
5' Flanking Sequence	GCCCTTGCTTGCAGGATAGTTTATTCAACCGTATTCAAGCATGGGTGCATGGCTACATAA TGTCCTAATACACTT
3' Flanking Sequence	AATACTATAGTATATTTATGTGAGATTCATGCGCTTAATAGTGAGTTCCACAGAAATACA CAGTGTTAAAGAGGG
Species	Vaccinium corymbosum
Publication	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vcev1_p0.Chr12	supercontig	Vcev1_p0.Chr12:44992437..44992437 .	Vaccinium caesariense clone W85-20 P0 v2.0 genome sequence	n/a

Publications


Year	Publication
2022	Mengist MF, Bostan H, De Paola D, Teresi SJ, Platts AE, Cremona G, Xinpeng Q, Mackey T, Bassil NV, Ashrafi H, Giongo L, Jibran R, Chagné D, Bianco L, Lila MA, Rowland LJ, Iovene M, Edger PP, Iorizzo M. Autopolyploid inheritance and a heterozygous reciprocal translocation shape chromosome genetic behavior in tetraploid blueberry (Vaccinium corymbosum).. The New Phytologist. 2022 Aug 13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Blueberry-DraperSelection44392/Jewel-F1	LG12	N/A	134.01	Chrom12_44992437	View

Sequence

>NCSU_Chrom12_44992437 ID=NCSU_Chrom12_44992437; Name=NCSU_Chrom12_44992437; organism=Vaccinium corymbosum; type=genetic_marker; length=153bp
GCCCTTGCTTGCAGGATAGTTTATTCAACCGTATTCAAGCATGGGTGCAT
GGCTACATAATGTCCTAATACACTT[T]AATACTATAGTATATTTATGTG
AGATTCATGCGCTTAATAGTGAGTTCCACAGAAATACACAGTGTTAAAGA
GGG