berc618, berc618 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	berc618
Genbank ID	N/A
Type	EST marker
Species	Vaccinium corymbosum
Primer 1	berc618.forward primer: GGTATGATGACCGACCTCGT
Primer 2	berc618.reverse primer: GTGGGTTTGTCAAGCCAGTT
Publication	[view all]

Publications


Year	Publication
2014	Rowland LJ, Ogden EL, Bassil N, Buck EJ, McCallum S, Graham J, Brown A, Wiedow C, Campbell AM, Haynes KG, Vinyard BT. Construction of a genetic linkage map of an interspecific diploid blueberry population and identification of QTL for chilling requirement and cold hardiness. Molecular breeding. 2014; 34(4):2033-2048.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Blueberry-F1#10xW85-23-F1	LG7	N/A	77	berc618	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr01	supercontig	Vcev1_p0.Chr01:26138090..26138657 .
VaccDscaff5	supercontig	VaccDscaff5:22014677..22015246 .
scaffold00848	supercontig	scaffold00848:66309..66877 .
chr1_H1	supercontig	chr1_H1:23073057..23073490 .
Vmac_chr06	supercontig	Vmac_chr06:17396440..17396935 .
chr6	supercontig	chr6:22013237..22013732 .
Chr01_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr01_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:25934870..25936089 .
Chr01_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr01_Vaccinium_vitis-idaea_ssp_minus:23967472..23967966 .