berc890, berc890 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	berc890
Genbank ID	N/A
Type	EST marker
Species	Vaccinium corymbosum
Primer 1	berc890.forward primer: AGCAGCAGTCCCAGCAAC
Primer 2	berc890.reverse primer: CATACAACCCTGTACCAACGTC
Publication	[view all]

Publications


Year	Publication
2014	Rowland LJ, Ogden EL, Bassil N, Buck EJ, McCallum S, Graham J, Brown A, Wiedow C, Campbell AM, Haynes KG, Vinyard BT. Construction of a genetic linkage map of an interspecific diploid blueberry population and identification of QTL for chilling requirement and cold hardiness. Molecular breeding. 2014; 34(4):2033-2048.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Blueberry-F1#10xW85-23-F1	LG4	N/A	91	berc890	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr03	supercontig	Vcev1_p0.Chr03:36474890..36475513 .
scaffold00746	supercontig	scaffold00746:6785..7410 .
chr3_H1	supercontig	chr3_H1:31663381..31664008 .
Vmac_chr04	supercontig	Vmac_chr04:24024256..24024891 .
chr4	supercontig	chr4:12024960..12025589 .
Chr03_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr03_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:14088766..14089389 .
Chr03_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr03_Vaccinium_vitis-idaea_ssp_minus:14384621..14385242 .