KAN09946, KAN09946 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	KAN09946
Genbank ID	N/A
Type	SSR
Species	Vaccinium corymbosum
Repeat Motif	(AT)14
Primer 1	KAN09946.forward primer: TTTGAATGCCTTGTTTGCTG
Primer 2	KAN09946.reverse primer: CCAAAATCGGCAAGATCCTA
Max Length	208
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr02	supercontig	Vcev1_p0.Chr02:1015491..1015677 .
scaffold00259	supercontig	scaffold00259:128574..128756 .
Vmac_chr01	supercontig	Vmac_chr01:824755..824935 .
chr1	supercontig	chr1:47931603..47931782 .
Chr02	supercontig	Chr02:685095..685263 .
Chr02_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr02_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:898253..898415 .
Chr02_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr02_Vaccinium_vitis-idaea_ssp_minus:842979..843143 .

Publications


Year	Publication
2014	Bian Y, Ballington J, Raja A, Brouwer C, Reid R, Burke M, Wang X, Rowland LJ, Bassil N, Brown A. Patterns of simple sequence repeats in cultivated blueberries (Vaccinium section Cyanococcus spp.) and their use in revealing genetic diversity and population structure. Molecular breeding. 2014; 34(2):675-689.