KAN40414, KAN40414 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	KAN40414
Genbank ID	N/A
Type	SSR
Species	Vaccinium corymbosum
Repeat Motif	(TTC)6
Primer 1	KAN40414.forward primer: TGTTGCCAAACCTGTGAAAA
Primer 2	KAN40414.reverse primer: GTTTCTGGGTGGTGCTCAGT
Max Length	267
Publication	[view all]

Publications


Year	Publication
2014	Bian Y, Ballington J, Raja A, Brouwer C, Reid R, Burke M, Wang X, Rowland LJ, Bassil N, Brown A. Patterns of simple sequence repeats in cultivated blueberries (Vaccinium section Cyanococcus spp.) and their use in revealing genetic diversity and population structure. Molecular breeding. 2014; 34(2):675-689.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr01	supercontig	Vcev1_p0.Chr01:338311..338554 .
VaccDscaff1	supercontig	VaccDscaff1:257870..258113 .
scaffold00032	supercontig	scaffold00032:362027..362270 .
chr1_H1	supercontig	chr1_H1:280654..280900 .
Vmac_chr06	supercontig	Vmac_chr06:184103..184343 .
chr6	supercontig	chr6:37831730..37831970 .
Chr01	supercontig	Chr01:40592325..40592567 .
Chr01_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr01_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:46649661..46649916 .
Chr02_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr02_Vaccinium_vitis-idaea_ssp_minus:16444345..16444594 .