VCBC09527, VCBC09527 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	VCBC09527
Genbank ID	N/A
Type	EST-SSR
Species	Vaccinium corymbosum
Repeat Motif	(tgtt)3
Primer 1	VCBC09527.forward primer: TATGCAGCTTGGGGTTCTTAAT
Primer 2	VCBC09527.reverse primer: CAACCTAGAAAAATGCGCCTAC
Max Length	266
Publication	[view all]

Publications


Year	Publication
2012	Rowland LJ, Alkharouf N, Darwish O, Ogden EL, Polashock JJ, Bassil NV, Main D. Generation and analysis of blueberry transcriptome sequences from leaves, developing fruit, and flower buds from cold acclimation through deacclimation. BMC plant biology. 2012; 12:46.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Blueberry-F1#10xW85-23-F1	LG1	N/A	85	VCB-C09527_228	View
2	Blueberry-F1#10xW85-23-F1	LG1	N/A	85	VCB-C09527_226	View
3	Blueberry-F1#10_x_W85-23-F1-2017	LG03	N/A	46.6	VCBC09527	View
4	Blueberry-F1#10-2017	LG03	N/A	47.3	VCBC09527	View
5	Blueberry-W85-23-2017	LG03	N/A	45.7	VCBC09527	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr08	supercontig	Vcev1_p0.Chr08:35650883..35651107 .
VaccDscaff30	supercontig	VaccDscaff30:15439189..15439415 .
chr8_H1	supercontig	chr8_H1:27762388..27762618 .
Chr08	supercontig	Chr08:24993672..24993880 .
Chr08_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr08_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:28280239..28280367 .
Chr08_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr08_Vaccinium_vitis-idaea_ssp_minus:27381181..27381390 .