16720_K63, 16720_K63 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	16720_K63
Genbank ID	KP279159
Type	EST-SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TC)17
Primer 1	16720_K63.forward primer: CTACCTTTCCCTCTCCTTGT
Primer 2	16720_K63.reverse primer: AGTTGAAGCTGAGAATTGTACC
Max Length	185
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP279159

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1_H1	supercontig	chr1_H1:50442592..50442744 .
Vmac_chr06	supercontig	Vmac_chr06:38257769..38257934 .
chr6	supercontig	chr6:1420402..1420541 .
Chr01	supercontig	Chr01:1324000..1324142 .
Chr01_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr01_Vaccinium_vitis-idaea_ssp_minus:1269812..1269934 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG6	N/A	0	16720_K63	View
2	Cranberry-Crimson_Queen-2007	LG6	N/A	0	16720_K63	View
3	Cranberry-Mullica_Queen-2007	LG6	N/A	0	16720_K63	View
4	Blueberry-F1#10_x_W85-23-F1-2017	LG06	N/A	1.4	16720_K63	View
5	Blueberry-F1#10-2017	LG06	N/A	0	16720_K63	View
6	Blueberry-W85-23-2017	LG06	N/A	0	16720_K63	View
7	Cranberry-CNJ02-1-2017	LG06	N/A	0	16720_K63	View
8	Cranberry-Crimson_Queen-2017	LG06	N/A	0	16720_K63	View
9	Cranberry-Mullica_Queen-2017	LG06	N/A	0	16720_K63	View
10	Cranberry-Composite_map-F1	LG06	N/A	88.38	16720_K63	View
11	Cranberry-Crimson_Queen-F1	LG06	N/A	82.45	16720_K63	View
12	Cranberry-Mullica_Queen_1-F1	LG06	N/A	111.37	16720_K63	View
13	Cranberry-Mullica_Queen_2-F1	LG06	N/A	98.88	16720_K63	View
14	Cranberry-Stevens-F1	LG06	N/A	77.75	16720_K63	View