CF811139 | GDV

EST Overview


Name	CF811139
Unique Name	CF811139
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	636

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF811139 vs. DB:swissprot:display
Match: AMSH2_ARATH (AMSH-like ubiquitin thiolesterase 2 OS=Arabidopsis thaliana GN=AMSH2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.520e-37
Identity = 77/135 (57.04%), Postives = 96/135 (71.11%), Query Frame = 3

Query:  234 VTQSSPSPTISCTQNAP-HIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            VT SSPSP++SC +N     + +SR+  +                 ++L+DVHIS +L+EDF  LA +NT KDLETCG L AFL  GIFYVTTLIIPKQES+SNSCQA+NE E+F +QNE+ L+PVGWIHTHPSQ
Sbjct:    2 VTLSSPSPSLSCVENVTCKSSHVSRVLISGTDNINHGESSEA----KILRDVHISERLLEDFTELARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNEVEVFSIQNERELYPVGWIHTHPSQ 132

[Close]

BLAST of CF811139 vs. DB:swissprot:display
Match: AMSH3_ARATH (AMSH-like ubiquitin thiolesterase 3 OS=Arabidopsis thaliana GN=AMSH3 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.402e-27
Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 3

Query:  234 VTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            V    PSP     Q    +A I     AD                   + +H+  ++M+DFL LA  NT ++LETCGVL   L+  +F++TTLIIPKQES+S+SCQ LNEEEIF +Q+  SLFP+GWIHTHP+Q
Sbjct:  283 VGMKQPSPPPVLAQVHQELAQICPSKVADPRPGPAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPTQ 416

[Close]

BLAST of CF811139 vs. DB:swissprot:display
Match: AMSH1_ARATH (AMSH-like ubiquitin thiolesterase 1 OS=Arabidopsis thaliana GN=AMSH1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.681e-26
Identity = 52/85 (61.18%), Postives = 70/85 (82.35%), Query Frame = 3

Query:  381 DVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            ++HI+  +M+ F+ LA+ NT K+LETCG+L   L+   FY+T LIIPKQES+S+SCQA NEEEIF +Q++QSLFP+GWIHTHP+Q
Sbjct:  332 ELHIATSMMDTFMRLAKSNTKKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKQSLFPLGWIHTHPTQ 416

[Close]

BLAST of CF811139 vs. DB:swissprot:display
Match: D1039_DICDI (Probable ubiquitin thiolesterase DG1039 OS=Dictyostelium discoideum GN=DG1039 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.236e-19
Identity = 38/87 (43.68%), Postives = 60/87 (68.97%), Query Frame = 3

Query:  375 LKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            L+ + +  ++ ++F+ LAE+NT + +ETCG+L   L   +F +TT+IIPKQE ++++C  + E EIF  Q E  L  +GWIHTHP+Q
Sbjct:  534 LRKIIVHGEVFQEFMRLAENNTKRSIETCGILSGTLSNDVFRITTIIIPKQEGTTDTCNTIEEHEIFEYQLENDLLTLGWIHTHPTQ 620

[Close]

BLAST of CF811139 vs. DB:swissprot:display
Match: STABP_HUMAN (STAM-binding protein OS=Homo sapiens GN=STAMBP PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.290e-16
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 3

Query:  375 LKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            L+ V +  +L   FL LA  NT + +ETCG+L   L    F +T ++IPKQ + S+ C   NEEE+F +Q++Q L  +GWIHTHP+Q
Sbjct:  254 LRHVVVPGRLCPQFLQLASANTARGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEEELFLIQDQQGLITLGWIHTHPTQ 340

[Close]

BLAST of CF811139 vs. DB:swissprot:display
Match: STABP_DANRE (STAM-binding protein-like OS=Danio rerio GN=stambp PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.290e-16
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 3

Query:  375 LKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            L+ + + A+L + FL LAE NT + +ETCG+L   L    F VT +I+PKQ    + C   NEEE+F +Q++  L  +GWIHTHP+Q
Sbjct:  248 LRQLFVPAELCQRFLKLAETNTARAVETCGILCGKLMKNAFTVTHVIVPKQCGGPDYCDTENEEELFLIQDQNDLITLGWIHTHPTQ 334

[Close]

BLAST of CF811139 vs. DB:swissprot:display
Match: STABP_RAT (STAM-binding protein OS=Rattus norvegicus GN=Stambp PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.558e-16
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 3

Query:  375 LKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            L+ + +   L  +FL LA  NT K +ETCGVL   L    F +T ++IP+Q    + C   NEEEIFF+Q++  L  +GWIHTHP+Q
Sbjct:  254 LRHIVVPRNLCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFMQDDLGLLTLGWIHTHPTQ 340

[Close]

BLAST of CF811139 vs. DB:swissprot:display
Match: STABP_MOUSE (STAM-binding protein OS=Mus musculus GN=Stambp PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.558e-16
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 3

Query:  375 LKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            L+ + +   L  +FL LA  NT K +ETCGVL   L    F +T ++IP+Q    + C   NEEEIFF+Q++  L  +GWIHTHP+Q
Sbjct:  254 LRHIVVPRNLCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFMQDDLGLLTLGWIHTHPTQ 340

[Close]

BLAST of CF811139 vs. DB:swissprot:display
Match: SST2_SCHPO (AMSH-like protease sst2 OS=Schizosaccharomyces pombe GN=sst2 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.630e-15
Identity = 36/87 (41.38%), Postives = 59/87 (67.82%), Query Frame = 3

Query:  375 LKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            L+ +++   L + FL + + NT K+LETCG+L   LR   F++T L+IP QE++S++C   +E  +F  Q++ +L  +GWIHTHP+Q
Sbjct:  260 LRTIYLPKLLKKVFLDVVKPNTKKNLETCGILCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLFEFQDKHNLLTLGWIHTHPTQ 346

[Close]

BLAST of CF811139 vs. DB:swissprot:display
Match: STABP_XENLA (STAM-binding protein-like OS=Xenopus laevis GN=stambp PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.743e-15
Identity = 38/87 (43.68%), Postives = 55/87 (63.22%), Query Frame = 3

Query:  375 LKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            L+ V I   +   FL L+E+NT + +ETCG+L   L    F VT +I+PKQ    + C   +EEE+F +Q++Q L  +GWIHTHP+Q
Sbjct:  246 LRHVKIPRDVCCKFLQLSENNTQRGVETCGILCGKLLQNEFTVTHVIVPKQSGGPDYCNTESEEELFLIQDQQGLITLGWIHTHPTQ 332

[Close]

BLAST of CF811139 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s05090.1 ()

HSP 1 Score: 172.555 bits (436), Expect = 1.829e-43
Identity = 89/144 (61.81%), Postives = 101/144 (70.14%), Query Frame = 3

Query:  204 SYCLQFGVHTVTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            S C    VHTVTQ+SP P +SC + AP  A +S I  AD                 VL+DVHIS  LMEDFL LA +NT KDLETCGVLGAFL  G +YVTTLIIPKQES+S+SC+AL EEE F +QNE+SLFPVGWIHTHPSQ
Sbjct:    6 SKCEHITVHTVTQTSPCPILSCVEKAPKYAHVSLIPVADSDQSSCNQPSASG----VLQDVHISPLLMEDFLELARENTEKDLETCGVLGAFLEHGTYYVTTLIIPKQESTSSSCEALKEEEFFAIQNERSLFPVGWIHTHPSQ 145

[Close]

BLAST of CF811139 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s15100.1 ()

HSP 1 Score: 124.02 bits (310), Expect = 7.459e-29
Identity = 64/134 (47.76%), Postives = 83/134 (61.94%), Query Frame = 3

Query:  234 VTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            + Q SP P ++  Q        S++  AD                   + +H+   LMEDFL LA  NT K+LETCGVL   L+  +F++TTLIIPKQES+S+SCQ LNEEEIF +Q++ SLFP+GWIHTHPSQ
Sbjct:  281 IRQPSPPPVLAKVQQESTPIPSSKV--ADPRPGPAKPSDDGLPSSNSYQHLHVPVNLMEDFLRLARANTEKNLETCGVLAGSLKNKVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDKLSLFPLGWIHTHPSQ 412

[Close]

BLAST of CF811139 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0015s03810.2 ()

HSP 1 Score: 120.168 bits (300), Expect = 1.077e-27
Identity = 55/84 (65.48%), Postives = 70/84 (83.33%), Query Frame = 3

Query:  384 VHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            +HIS  LME+F+ +A+ NT+K+LETCGVL   L+   FYVT LIIPKQES+S+SCQ  NEEEIF +Q++QSLFP+GWIHTHP+Q
Sbjct:  329 LHISTTLMENFMKMAKSNTDKNLETCGVLAGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGWIHTHPTQ 412

[Close]

BLAST of CF811139 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0015s03810.1 ()

HSP 1 Score: 120.168 bits (300), Expect = 1.077e-27
Identity = 55/84 (65.48%), Postives = 70/84 (83.33%), Query Frame = 3

Query:  384 VHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            +HIS  LME+F+ +A+ NT+K+LETCGVL   L+   FYVT LIIPKQES+S+SCQ  NEEEIF +Q++QSLFP+GWIHTHP+Q
Sbjct:  329 LHISTTLMENFMKMAKSNTDKNLETCGVLAGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGWIHTHPTQ 412

[Close]

BLAST of CF811139 vs. P. persica 1.0 peptide
Match: ppa009978m ()

HSP 1 Score: 188.348 bits (477), Expect = 2.305e-48
Identity = 96/150 (64.00%), Postives = 107/150 (71.33%), Query Frame = 3

Query:  186 NLLMAASYCLQFGVHTVTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            N L   S C    VHTVTQ SPSP ISCT++ P  A+IS+IT                    VL+DVHISA LMEDFL LA+DNT KDLETCG LGAFL+ G FYVTTLIIPKQE +SNSCQA N+EE+F +QNEQSLFPVGWIHTHPSQ
Sbjct:   31 NFLKTTSQCQNITVHTVTQFSPSPVISCTESVPQGANISQITV--DTEHGQSQSSNQSTSSTVLRDVHISANLMEDFLGLAKDNTEKDLETCGTLGAFLKNGTFYVTTLIIPKQECTSNSCQATNDEEVFSIQNEQSLFPVGWIHTHPSQ 178

[Close]

BLAST of CF811139 vs. P. persica 1.0 peptide
Match: ppa005511m ()

HSP 1 Score: 121.709 bits (304), Expect = 2.650e-28
Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = 3

Query:  234 VTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            + Q SP P ++  Q  P  A I     AD                   + +H+  +LM+DFL LA  NT K+LETCG+L   L+  +F++TTLI+PKQES+S+SCQ LNEEE+F +Q+  SLF +GWIHTHPSQ
Sbjct:  235 INQPSPPPVLARVQ--PEYAPIPPSKVADPRPGPAKPSVDGMPSSNSYQHLHVPVKLMDDFLRLARANTEKNLETCGILAGSLKNKVFHITTLIVPKQESTSDSCQTLNEEEVFEVQDRLSLFSLGWIHTHPSQ 366

[Close]

BLAST of CF811139 vs. P. persica 1.0 peptide
Match: ppa005186m ()

HSP 1 Score: 117.857 bits (294), Expect = 3.826e-27
Identity = 54/84 (64.29%), Postives = 69/84 (82.14%), Query Frame = 3

Query:  384 VHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            +HIS  +ME F+ LA+ NT+K+LETCGVL   L+   F+VT LIIPKQES+S+SCQ  NEEEIF +Q++QSLFP+GWIHTHP+Q
Sbjct:  299 LHISTTMMEHFMKLAKSNTDKNLETCGVLAGSLKNRKFFVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGWIHTHPTQ 382

[Close]

BLAST of CF811139 vs. TrEMBL
Match: D7TDF2|D7TDF2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_127.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013737001 PE=4 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.981e-43
Identity = 91/150 (60.67%), Postives = 108/150 (72.00%), Query Frame = 3

Query:  186 NLLMAASYCLQFGVHTVTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            + + A+ +C+   VH VT++SPSP I CT+NA H   IS I  +D                + L+DVHISA+LMEDFL LA DNT  DLETCG+LGAFL+ G FYVTTLIIPKQES+SNSCQA+ EEEIF +QNE SLFPVGWIHTHPSQ
Sbjct:   38 SFMTASEHCIT--VHAVTKASPSPIIYCTENAHHDKHISHIEVSDSEPGHSKSCSETAVSKK-LQDVHISARLMEDFLELARDNTKNDLETCGILGAFLKMGTFYVTTLIIPKQESTSNSCQAIKEEEIFAIQNEHSLFPVGWIHTHPSQ 184

[Close]

BLAST of CF811139 vs. TrEMBL
Match: B9SHA7|B9SHA7_RICCO (Amsh, putative OS=Ricinus communis GN=RCOM_0528130 PE=4 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.901e-40
Identity = 87/150 (58.00%), Postives = 102/150 (68.00%), Query Frame = 3

Query:  186 NLLMAASYCLQFGVHTVTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            NL      C Q  VHTVTQSSPSP +SC + AP  A IS I +A                  +L+D+HIS +LMEDFL LA +NT KDLETCGVL AFL  G +YVTTLIIPKQ S+S+SC+A+ EEE F +QNE+SL PVGWIHTHPSQ
Sbjct:   29 NLTQKEGKCPQITVHTVTQSSPSPILSCVEKAPKHAHISPIPAAGSNTNPCNQPSSS----NILQDIHISERLMEDFLELARENTEKDLETCGVLSAFLEMGTYYVTTLIIPKQNSTSSSCEAIKEEEFFAIQNERSLHPVGWIHTHPSQ 174

[Close]

BLAST of CF811139 vs. TrEMBL
Match: B9HU66|B9HU66_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_230673 PE=4 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.324e-38
Identity = 83/134 (61.94%), Postives = 96/134 (71.64%), Query Frame = 3

Query:  234 VTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            VTQ+SP P +SC + AP  A +S I  AD                 VL+DVHIS  LMEDFL LA +NT KDLETCGVLGAFL  G +YVTTLIIPKQ+S+S+SC+AL EEE F +QNE+SLFPVGWIHTHPSQ
Sbjct:    1 VTQTSPCPILSCVEKAPKYAHVSLIPVADSDQSSCNQPSASG----VLQDVHISPLLMEDFLELARENTEKDLETCGVLGAFLEHGTYYVTTLIIPKQDSTSSSCEALKEEEFFAIQNERSLFPVGWIHTHPSQ 130

[Close]

BLAST of CF811139 vs. TrEMBL
Match: D7KLG1|D7KLG1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_888336 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.080e-35
Identity = 77/135 (57.04%), Postives = 96/135 (71.11%), Query Frame = 3

Query:  234 VTQSSPSPTISCTQNAP-HIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            VT SSPSP++SC +N     + +SR+  +                 ++L+DVHIS +L+EDF  LA +NT KDLETCG L AFL  GIFYVTTLIIPKQES+SNSCQA+NE E+F +QNE+ L+PVGWIHTHPSQ
Sbjct:    2 VTLSSPSPSLSCVENVTCKSSHVSRVLISGTDKNNHGESSEP----KILRDVHISERLLEDFTELARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNEVEVFSIQNERELYPVGWIHTHPSQ 132

[Close]

BLAST of CF811139 vs. TrEMBL
Match: B9HWW9|B9HWW9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_805251 PE=4 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.160e-27
Identity = 64/134 (47.76%), Postives = 83/134 (61.94%), Query Frame = 3

Query:  234 VTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            + Q SP P ++  Q        S++  AD                   + +H+   LMEDFL LA  NT K+LETCGVL   L+  +F++TTLIIPKQES+S+SCQ LNEEEIF +Q++ SLFP+GWIHTHPSQ
Sbjct:  248 IRQPSPPPVLAKVQQESTPIPSSKV--ADPRPGPAKPSDDGLPSSNSYQHLHVPVNLMEDFLRLARANTEKNLETCGVLAGSLKNKVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDKLSLFPLGWIHTHPSQ 379

[Close]

BLAST of CF811139 vs. TrEMBL
Match: A5AG13|A5AG13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019835 PE=4 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.563e-26
Identity = 70/147 (47.62%), Postives = 87/147 (59.18%), Query Frame = 3

Query:  186 NLLMAASYCLQFGVHTVTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTH 626
            + + A+ +C+   VH VT++SPSP I CT+NA H   IS I  +D              X + L+DVHISA+LMEDFL LA DNT  D+ETCG+LGAFL                     CQA+ EEEIF +QNEQSLFPVGWIH +
Sbjct:   60 SFMTASEHCIT--VHAVTKASPSPIIYCTENAHHDKHISHIKVSDSEPGHSKSCSETAVXKK-LQDVHISARLMEDFLELARDNTKNDVETCGILGAFL---------------------CQAIKEEEIFAIQNEQSLFPVGWIHVY 182

[Close]

BLAST of CF811139 vs. TrEMBL
Match: D7SY60|D7SY60_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035040001 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.546e-26
Identity = 65/139 (46.76%), Postives = 84/139 (60.43%), Query Frame = 3

Query:  219 FGVHTVTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            F +  + Q SP P ++  Q   H    S++                    + L   HI   +MEDFL LA  NT K+LETCGVL   L+  +F++TTLIIPKQES+S+SCQ LNEEEIF +Q++ SLFP+GWIHTHPSQ
Sbjct:  290 FPLGNIRQPSPPPVLAQIQQDCHPIPPSKVADPRPGPATSQHGMPSSNSYQHL---HIPVSMMEDFLRLALANTKKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDKLSLFPLGWIHTHPSQ 425

[Close]

BLAST of CF811139 vs. TrEMBL
Match: D7MA75|D7MA75_ARALY (At4g16144 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493270 PE=4 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.755e-26
Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 3

Query:  234 VTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            V    PSP     Q    +A I     AD                   + +H+  ++M+DFL LA  NT ++LETCGVL   L+  +F++TTLIIPKQES+S+SCQ LNEEEIF +Q+  SLFP+GWIHTHP+Q
Sbjct:  283 VGMKQPSPPPVLAQVHQELAQICPSKVADPRPGPAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPTQ 416

[Close]

BLAST of CF811139 vs. TrEMBL
Match: B9IE48|B9IE48_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_733000 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.323e-25
Identity = 55/84 (65.48%), Postives = 70/84 (83.33%), Query Frame = 3

Query:  384 VHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            +HIS  LME+F+ +A+ NT+K+LETCGVL   L+   FYVT LIIPKQES+S+SCQ  NEEEIF +Q++QSLFP+GWIHTHP+Q
Sbjct:  321 LHISTTLMENFMKMAKSNTDKNLETCGVLAGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGWIHTHPTQ 404

[Close]

BLAST of CF811139 vs. TrEMBL
Match: Q5SMR4|Q5SMR4_ORYSJ (ALM beta-like OS=Oryza sativa subsp. japonica GN=P0445H04.41 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.256e-25
Identity = 58/138 (42.03%), Postives = 86/138 (62.32%), Query Frame = 3

Query:  222 GVHTVTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            G ++V    PSP +S  ++     ++S     +                  L D+ IS +L ++F+ LA++NT  ++ETCG+LGA  R G +YVT LIIPKQE++++SCQA++EEEI  + +EQSL+P GWIHTHPSQ
Sbjct:  300 GSYSVKHHYPSPIVSWIEDLSSFGNVSFSQDPEYADEQSRSSVGQSSASVNLHDMQISVRLTDEFIELAKENTGNNVETCGILGASFRDGTYYVTMLIIPKQEATAHSCQAVSEEEIHAILSEQSLYPAGWIHTHPSQ 437

[Close]

BLAST of CF811139 vs. Vitis vinifera peptide
Match: GSVIVT01013737001 (assembled CDS)

HSP 1 Score: 177.563 bits (449), Expect = 3.480e-45
Identity = 91/150 (60.67%), Postives = 108/150 (72.00%), Query Frame = 3

Query:  186 NLLMAASYCLQFGVHTVTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            + + A+ +C+   VH VT++SPSP I CT+NA H   IS I  +D                + L+DVHISA+LMEDFL LA DNT  DLETCG+LGAFL+ G FYVTTLIIPKQES+SNSCQA+ EEEIF +QNE SLFPVGWIHTHPSQ
Sbjct:   38 SFMTASEHCIT--VHAVTKASPSPIIYCTENAHHDKHISHIEVSDSEPGHSKSCSETAVSKK-LQDVHISARLMEDFLELARDNTKNDLETCGILGAFLKMGTFYVTTLIIPKQESTSNSCQAIKEEEIFAIQNEHSLFPVGWIHTHPSQ 184

[Close]

BLAST of CF811139 vs. Vitis vinifera peptide
Match: GSVIVT01035040001 (assembled CDS)

HSP 1 Score: 121.709 bits (304), Expect = 2.266e-28
Identity = 65/139 (46.76%), Postives = 84/139 (60.43%), Query Frame = 3

Query:  219 FGVHTVTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            F +  + Q SP P ++  Q   H    S++                    + L   HI   +MEDFL LA  NT K+LETCGVL   L+  +F++TTLIIPKQES+S+SCQ LNEEEIF +Q++ SLFP+GWIHTHPSQ
Sbjct:  290 FPLGNIRQPSPPPVLAQIQQDCHPIPPSKVADPRPGPATSQHGMPSSNSYQHL---HIPVSMMEDFLRLALANTKKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDKLSLFPLGWIHTHPSQ 425

[Close]

BLAST of CF811139 vs. Vitis vinifera peptide
Match: GSVIVT01008310001 (assembled CDS)

HSP 1 Score: 118.627 bits (296), Expect = 1.918e-27
Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 3

Query:  381 DVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            ++HIS  LME FL LA+ NT ++LETCG+L   L+   FYVT LIIPKQES+S+SCQ  NEEEIF +Q++QSLFP+GWIHTHP+Q
Sbjct:  331 EMHISTVLMESFLKLAKSNTVRNLETCGILAGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGWIHTHPTQ 415

[Close]

BLAST of CF811139 vs. TAIR peptide
Match: AT1G10600.3 (| Symbols: AMSH2 | associated molecule with the SH3 domain of STAM 2 | chr1:3503765-3505190 FORWARD LENGTH=222)

HSP 1 Score: 153.68 bits (387), Expect = 7.741e-38
Identity = 77/135 (57.04%), Postives = 96/135 (71.11%), Query Frame = 3

Query:  234 VTQSSPSPTISCTQNAP-HIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            VT SSPSP++SC +N     + +SR+  +                 ++L+DVHIS +L+EDF  LA +NT KDLETCG L AFL  GIFYVTTLIIPKQES+SNSCQA+NE E+F +QNE+ L+PVGWIHTHPSQ
Sbjct:    2 VTLSSPSPSLSCVENVTCKSSHVSRVLISGTDNINHGESSEA----KILRDVHISERLLEDFTELARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNEVEVFSIQNERELYPVGWIHTHPSQ 132

[Close]

BLAST of CF811139 vs. TAIR peptide
Match: AT1G10600.1 (| Symbols: AMSH2 | associated molecule with the SH3 domain of STAM 2 | chr1:3503765-3505190 FORWARD LENGTH=223)

HSP 1 Score: 153.68 bits (387), Expect = 7.741e-38
Identity = 77/135 (57.04%), Postives = 96/135 (71.11%), Query Frame = 3

Query:  234 VTQSSPSPTISCTQNAP-HIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            VT SSPSP++SC +N     + +SR+  +                 ++L+DVHIS +L+EDF  LA +NT KDLETCG L AFL  GIFYVTTLIIPKQES+SNSCQA+NE E+F +QNE+ L+PVGWIHTHPSQ
Sbjct:    2 VTLSSPSPSLSCVENVTCKSSHVSRVLISGTDNINHGESSEA----KILRDVHISERLLEDFTELARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNEVEVFSIQNERELYPVGWIHTHPSQ 132

[Close]

BLAST of CF811139 vs. TAIR peptide
Match: AT4G16144.1 (| Symbols: AMSH3 | associated molecule with the SH3 domain of STAM 3 | chr4:9138053-9141422 REVERSE LENGTH=507)

HSP 1 Score: 120.939 bits (302), Expect = 5.560e-28
Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 3

Query:  234 VTQSSPSPTISCTQNAPHIADISRITSADXXXXXXXXXXXXXXXXRVLKDVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            V    PSP     Q    +A I     AD                   + +H+  ++M+DFL LA  NT ++LETCGVL   L+  +F++TTLIIPKQES+S+SCQ LNEEEIF +Q+  SLFP+GWIHTHP+Q
Sbjct:  283 VGMKQPSPPPVLAQVHQELAQICPSKVADPRPGPAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPTQ 416

[Close]

BLAST of CF811139 vs. TAIR peptide
Match: AT1G48790.1 (| Symbols: AMSH1 | associated molecule with the SH3 domain of STAM 1 | chr1:18043925-18047427 REVERSE LENGTH=507)

HSP 1 Score: 118.627 bits (296), Expect = 2.760e-27
Identity = 52/85 (61.18%), Postives = 70/85 (82.35%), Query Frame = 3

Query:  381 DVHISAQLMEDFLALAEDNTNKDLETCGVLGAFLRGGIFYVTTLIIPKQESSSNSCQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            ++HI+  +M+ F+ LA+ NT K+LETCG+L   L+   FY+T LIIPKQES+S+SCQA NEEEIF +Q++QSLFP+GWIHTHP+Q
Sbjct:  332 ELHIATSMMDTFMRLAKSNTKKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKQSLFPLGWIHTHPTQ 416

[Close]

BLAST of CF811139 vs. TAIR peptide
Match: AT1G10600.2 (| Symbols: AMSH2 | associated molecule with the SH3 domain of STAM 2 | chr1:3503907-3505190 FORWARD LENGTH=166)

HSP 1 Score: 56.9954 bits (136), Expect = 9.861e-9
Identity = 22/30 (73.33%), Postives = 27/30 (90.00%), Query Frame = 3

Query:  546 CQALNEEEIFFLQNEQSLFPVGWIHTHPSQ 635
            CQA+NE E+F +QNE+ L+PVGWIHTHPSQ
Sbjct:   46 CQAMNEVEVFSIQNERELYPVGWIHTHPSQ 75

The following BLAST results are available for this feature:

BLAST of CF811139 vs. DB:swissprot:display
BLAST of CF811139 vs. Populus trichocarpa peptide v2.0
BLAST of CF811139 vs. P. persica 1.0 peptide
BLAST of CF811139 vs. TrEMBL
BLAST of CF811139 vs. Vitis vinifera peptide
BLAST of CF811139 vs. TAIR peptide

BLAST of CF811139 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
AMSH2_ARATH	7.520e-37	57.04	AMSH-like ubiquitin thiolesterase 2 OS=Arabidopsis...	[more]
AMSH3_ARATH	5.402e-27	45.52	AMSH-like ubiquitin thiolesterase 3 OS=Arabidopsis...	[more]
AMSH1_ARATH	2.681e-26	61.18	AMSH-like ubiquitin thiolesterase 1 OS=Arabidopsis...	[more]
D1039_DICDI	9.236e-19	43.68	Probable ubiquitin thiolesterase DG1039 OS=Dictyos...	[more]
STABP_HUMAN	4.290e-16	44.83	STAM-binding protein OS=Homo sapiens GN=STAMBP PE=...	[more]
STABP_DANRE	4.290e-16	44.83	STAM-binding protein-like OS=Danio rerio GN=stambp...	[more]
STABP_RAT	9.558e-16	44.83	STAM-binding protein OS=Rattus norvegicus GN=Stamb...	[more]
STABP_MOUSE	9.558e-16	44.83	STAM-binding protein OS=Mus musculus GN=Stambp PE=...	[more]
SST2_SCHPO	1.630e-15	41.38	AMSH-like protease sst2 OS=Schizosaccharomyces pom...	[more]
STABP_XENLA	4.743e-15	43.68	STAM-binding protein-like OS=Xenopus laevis GN=sta...	[more]

BLAST of CF811139 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4


Match Name	E-value	Identity
POPTR_0010s05090.1	1.829e-43	61.81	[more]
POPTR_0010s15100.1	7.459e-29	47.76	[more]
POPTR_0015s03810.2	1.077e-27	65.48	[more]
POPTR_0015s03810.1	1.077e-27	65.48	[more]

BLAST of CF811139 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 3


Match Name	E-value	Identity
ppa009978m	2.305e-48	64.00	[more]
ppa005511m	2.650e-28	45.52	[more]
ppa005186m	3.826e-27	64.29	[more]

BLAST of CF811139 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7TDF2\|D7TDF2_VITVI	6.981e-43	60.67	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SHA7\|B9SHA7_RICCO	1.901e-40	58.00	Amsh, putative OS=Ricinus communis GN=RCOM_0528130...	[more]
B9HU66\|B9HU66_POPTR	2.324e-38	61.94	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7KLG1\|D7KLG1_ARALY	1.080e-35	57.04	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B9HWW9\|B9HWW9_POPTR	9.160e-27	47.76	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5AG13\|A5AG13_VITVI	1.563e-26	47.62	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7SY60\|D7SY60_VITVI	4.546e-26	46.76	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7MA75\|D7MA75_ARALY	7.755e-26	45.52	At4g16144 OS=Arabidopsis lyrata subsp. lyrata GN=A...	[more]
B9IE48\|B9IE48_POPTR	1.323e-25	65.48	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q5SMR4\|Q5SMR4_ORYSJ	2.256e-25	42.03	ALM beta-like OS=Oryza sativa subsp. japonica GN=P...	[more]

BLAST of CF811139 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 3


Match Name	E-value	Identity	Description
GSVIVT01013737001	3.480e-45	60.67	assembled CDS	[more]
GSVIVT01035040001	2.266e-28	46.76	assembled CDS	[more]
GSVIVT01008310001	1.918e-27	64.71	assembled CDS	[more]

BLAST of CF811139 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G10600.3	7.741e-38	57.04	\| Symbols: AMSH2 \| associated molecule with the SH...	[more]
AT1G10600.1	7.741e-38	57.04	\| Symbols: AMSH2 \| associated molecule with the SH...	[more]
AT4G16144.1	5.560e-28	45.52	\| Symbols: AMSH3 \| associated molecule with the SH...	[more]
AT1G48790.1	2.760e-27	61.18	\| Symbols: AMSH1 \| associated molecule with the SH...	[more]
AT1G10600.2	9.861e-9	73.33	\| Symbols: AMSH2 \| associated molecule with the SH...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000555	Mov34/MPN/PAD-1	PFAM	PF01398	Mov34	coord: 66..150 score: 2.5
None	No IPR available	GENE3D	3.40.140.10	no description	coord: 68..150 score: 1.6
None	No IPR available	PANTHER	PTHR12947	AMSH	coord: 11..151 score: 1.4
None	No IPR available	SEG	seg	seg	coord: 47..62 score
None	No IPR available	SUPERFAMILY	102712	JAB1/MPN domain	coord: 65..151 score: 4.6

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF811139 ID=CF811139; Name=CF811139; organism=Vaccinium corymbosum; type=EST; length=636bp
CTCTCTCTCTCTCAAAAACCACTTTCTTTTTTTCCATTTCCTAATCTTCA
TGTGACCAACAGCTGTTTTTTGGTTCGACTCCTCTTAGCCAAAAGACTTA
CTAATTGACAGAATACTCAATGGGGAAACCATTGCTCAGCATATTCAGTT
GGTTTTAGCATCATTGATGTTCAACCCTGTAGTTCAATCTCCTTATGGCT
GCCAGCTATTGTTTGCAGTTCGGCGTGCATACAGTTACACAATCCTCTCC
CTCCCCAACAATCTCTTGTACGCAAAATGCACCTCATATTGCAGACATCT
CACGTATCACTAGTGCTGATTCAGTACACGGACATTCGAGTTCTTCATCC
CATGGGTCGACTGTTTCTAGGGTCCTTAAAGATGTGCATATATCAGCACA
GTTGATGGAGGATTTTCTTGCACTTGCCGAAGACAACACAAATAAAGATT
TGGAGACCTGTGGGGTTCTTGGCGCTTTCCTTAGAGGTGGAATTTTCTAC
GTCACGACTCTGATAATTCCCAAACAAGAATCGAGTTCCAATTCTTGCCA
GGCTCTAAATGAGGAGGAGATCTTTTTCCTACAAAATGAACAGTCCCTGT
TTCCTGTGGGTTGGATCCATACACATCCTTCTCAAN

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR000555	JAMM/MPN+_dom
noIPR	unintegrated