CF811434 | GDV

EST Overview


Name	CF811434
Unique Name	CF811434
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	350

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF811434 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s12230.3 ()

HSP 1 Score: 72.7886 bits (177), Expect = 5.795e-14
Identity = 42/79 (53.16%), Postives = 47/79 (59.49%), Query Frame = 1

Query:   94 VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFNL 330
            VP+EVYK LDAVGEGE WWE VELQ       +     +              H+KLS LPAA+GEL MLK LDVSFNL
Sbjct:   24 VPDEVYKILDAVGEGEKWWENVELQKLILAHNNIEAIKEDLKNLSQLTVLNVSHNKLSALPAAIGELPMLKLLDVSFNL 102

[Close]

BLAST of CF811434 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s12230.2 ()

HSP 1 Score: 72.7886 bits (177), Expect = 5.795e-14
Identity = 42/79 (53.16%), Postives = 47/79 (59.49%), Query Frame = 1

Query:   94 VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFNL 330
            VP+EVYK LDAVGEGE WWE VELQ       +     +              H+KLS LPAA+GEL MLK LDVSFNL
Sbjct:   24 VPDEVYKILDAVGEGEKWWENVELQKLILAHNNIEAIKEDLKNLSQLTVLNVSHNKLSALPAAIGELPMLKLLDVSFNL 102

[Close]

BLAST of CF811434 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s12230.1 ()

HSP 1 Score: 72.7886 bits (177), Expect = 5.795e-14
Identity = 42/79 (53.16%), Postives = 47/79 (59.49%), Query Frame = 1

Query:   94 VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFNL 330
            VP+EVYK LDAVGEGE WWE VELQ       +     +              H+KLS LPAA+GEL MLK LDVSFNL
Sbjct:   24 VPDEVYKILDAVGEGEKWWENVELQKLILAHNNIEAIKEDLKNLSQLTVLNVSHNKLSALPAAIGELPMLKLLDVSFNL 102

[Close]

BLAST of CF811434 vs. P. persica 1.0 peptide
Match: ppa003338m ()

HSP 1 Score: 69.3218 bits (168), Expect = 4.256e-13
Identity = 38/78 (48.72%), Postives = 47/78 (60.26%), Query Frame = 1

Query:   94 VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFN 327
            VP+EVY+S  AVG+ E WWEAVELQ       +  +  +              H+KLS LPAA+GEL MLKSLD+SFN
Sbjct:   24 VPDEVYRSTSAVGDDEKWWEAVELQKLIIAHNNIESLKEELRNLPLLTVLNVSHNKLSELPAAIGELTMLKSLDLSFN 101

[Close]

BLAST of CF811434 vs. TrEMBL
Match: B9HZW7|B9HZW7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_568927 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.250e-11
Identity = 42/79 (53.16%), Postives = 47/79 (59.49%), Query Frame = 1

Query:   94 VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFNL 330
            VP+EVYK LDAVGEGE WWE VELQ       +     +              H+KLS LPAA+GEL MLK LDVSFNL
Sbjct:   24 VPDEVYKILDAVGEGEKWWENVELQKLILAHNNIEAIKEDLKNLSQLTVLNVSHNKLSALPAAIGELPMLKLLDVSFNL 102

[Close]

BLAST of CF811434 vs. TrEMBL
Match: Q9M7W9|Q9M7W9_ARATH (MJK13.7 protein OS=Arabidopsis thaliana GN=MJK13.7 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.382e-10
Identity = 39/86 (45.35%), Postives = 48/86 (55.81%), Query Frame = 1

Query:   70 LPNFTSR*VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFN 327
            L N + + VP EVY+ L+  GEGENWWEAV+LQ             +              H+KLS LPAA+GEL  +KSLDVSFN
Sbjct:   16 LSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFN 101

[Close]

BLAST of CF811434 vs. TrEMBL
Match: Q9LUQ2|Q9LUQ2_ARATH (Leucine-rich repeat protein; contains similarity to elicitor-inducible receptor EIR OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.382e-10
Identity = 39/86 (45.35%), Postives = 48/86 (55.81%), Query Frame = 1

Query:   70 LPNFTSR*VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFN 327
            L N + + VP EVY+ L+  GEGENWWEAV+LQ             +              H+KLS LPAA+GEL  +KSLDVSFN
Sbjct:   16 LSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFN 101

[Close]

BLAST of CF811434 vs. TrEMBL
Match: Q8L7Z2|Q8L7Z2_ARATH (AT3g15410/MJK13_7 OS=Arabidopsis thaliana GN=At3g15410 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.382e-10
Identity = 39/86 (45.35%), Postives = 48/86 (55.81%), Query Frame = 1

Query:   70 LPNFTSR*VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFN 327
            L N + + VP EVY+ L+  GEGENWWEAV+LQ             +              H+KLS LPAA+GEL  +KSLDVSFN
Sbjct:   16 LSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFN 101

[Close]

BLAST of CF811434 vs. TrEMBL
Match: O49751|O49751_ARATH (Leucine-rich repeat protein OS=Arabidopsis thaliana GN=G8B7T7 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.382e-10
Identity = 39/86 (45.35%), Postives = 48/86 (55.81%), Query Frame = 1

Query:   70 LPNFTSR*VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFN 327
            L N + + VP EVY+ L+  GEGENWWEAV+LQ             +              H+KLS LPAA+GEL  +KSLDVSFN
Sbjct:   16 LSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFN 101

[Close]

BLAST of CF811434 vs. TrEMBL
Match: O49750|O49750_ARATH (Leucine-rich repeat protein OS=Arabidopsis thaliana GN=G8B7T7 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.382e-10
Identity = 39/86 (45.35%), Postives = 48/86 (55.81%), Query Frame = 1

Query:   70 LPNFTSR*VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFN 327
            L N + + VP EVY+ L+  GEGENWWEAV+LQ             +              H+KLS LPAA+GEL  +KSLDVSFN
Sbjct:   16 LSNRSLKDVPTEVYQCLETAGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFN 101

[Close]

BLAST of CF811434 vs. TrEMBL
Match: O04143|O04143_SILLA (Putative uncharacterized protein OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.805e-10
Identity = 40/87 (45.98%), Postives = 48/87 (55.17%), Query Frame = 1

Query:   70 LPNFTSR*VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFNL 330
            L N + R VP EVYK+ D   EGENWWE V+LQ       +     +              H+KL+ LPAA+GEL  LKSLDVSFNL
Sbjct:   16 LSNRSLRDVPIEVYKNFDGAPEGENWWETVDLQKLILAHNNIEVLKEDLKNLPLLTVLNVSHNKLTQLPAAIGELPSLKSLDVSFNL 102

[Close]

BLAST of CF811434 vs. TrEMBL
Match: D7L435|D7L435_ARALY (Leucine-rich repeat family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478983 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.996e-9
Identity = 38/86 (44.19%), Postives = 47/86 (54.65%), Query Frame = 1

Query:   70 LPNFTSR*VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFN 327
            L N + + VP EVY+ L+  GEGENWWEAV+LQ             +              H+ LS LPAA+GEL  +KSLDVSFN
Sbjct:   16 LSNRSLKDVPIEVYQCLETTGEGENWWEAVDLQKLILAHNDIAVLREDLKNLACLVVLNVSHNNLSQLPAAIGELTAMKSLDVSFN 101

[Close]

BLAST of CF811434 vs. TrEMBL
Match: B9SRF2|B9SRF2_RICCO (Leucine-rich repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1125810 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.584e-9
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 1

Query:  100 NEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFNL 330
            +EVY+S DA GEGE WWE VELQ          +  +              ++KL+ LPAA+GEL +LKSLDVSFN+
Sbjct:   25 HEVYRSSDAAGEGEKWWETVELQKLILAHNSIESLKEDLRLLPQLTVLNVSNNKLTALPAAIGELSLLKSLDVSFNM 101

[Close]

BLAST of CF811434 vs. TrEMBL
Match: C0PF76|C0PF76_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.385e-8
Identity = 33/86 (38.37%), Postives = 46/86 (53.49%), Query Frame = 1

Query:   70 LPNFTSR*VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFN 327
            L N + R +P EVY +LD   + E WWE V+LQ       +     +              H+K+S LPAA+G+L +LKSLD+SFN
Sbjct:   16 LSNRSLREIPKEVYNNLDTGSQDEKWWEGVDLQKLILAHNNLEVLREDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFN 101

[Close]

BLAST of CF811434 vs. Vitis vinifera peptide
Match: GSVIVT01014371001 (assembled CDS)

HSP 1 Score: 72.7886 bits (177), Expect = 3.377e-14
Identity = 42/86 (48.84%), Postives = 51/86 (59.30%), Query Frame = 1

Query:   70 LPNFTSR*VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFN 327
            L N   R VP+EVY+SLDA+GEGE WWEAVELQ          +  +              ++KL HLPAA+GEL MLKSLD+S N
Sbjct:   16 LSNRALREVPDEVYRSLDAIGEGEKWWEAVELQKLILAHNDIESLREDLKNLSLLSVLNLSNNKLVHLPAAIGELPMLKSLDLSQN 101

[Close]

BLAST of CF811434 vs. TAIR peptide
Match: AT3G15410.1 (| Symbols: | Leucine-rich repeat (LRR) family protein | chr3:5203380-5207279 FORWARD LENGTH=584)

HSP 1 Score: 69.3218 bits (168), Expect = 5.357e-13
Identity = 39/86 (45.35%), Postives = 48/86 (55.81%), Query Frame = 1

Query:   70 LPNFTSR*VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFN 327
            L N + + VP EVY+ L+  GEGENWWEAV+LQ             +              H+KLS LPAA+GEL  +KSLDVSFN
Sbjct:   16 LSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFN 101

[Close]

BLAST of CF811434 vs. TAIR peptide
Match: AT3G15410.2 (| Symbols: | Leucine-rich repeat (LRR) family protein | chr3:5203380-5207279 FORWARD LENGTH=590)

HSP 1 Score: 68.1662 bits (165), Expect = 1.193e-12
Identity = 37/78 (47.44%), Postives = 44/78 (56.41%), Query Frame = 1

Query:   94 VPNEVYKSLDAVGEGENWWEAVELQTNFGP**H*NTKGKXXXXXXXXXXXXXXHSKLSHLPAAVGELHMLKSLDVSFN 327
            VP EVY+ L+  GEGENWWEAV+LQ             +              H+KLS LPAA+GEL  +KSLDVSFN
Sbjct:   30 VPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFN 107

The following BLAST results are available for this feature:

BLAST of CF811434 vs. Populus trichocarpa peptide v2.0
BLAST of CF811434 vs. P. persica 1.0 peptide
BLAST of CF811434 vs. TrEMBL
BLAST of CF811434 vs. Vitis vinifera peptide
BLAST of CF811434 vs. TAIR peptide

BLAST of CF811434 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0011s12230.3	5.795e-14	53.16	[more]
POPTR_0011s12230.2	5.795e-14	53.16	[more]
POPTR_0011s12230.1	5.795e-14	53.16	[more]

BLAST of CF811434 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa003338m	4.256e-13	48.72		[more]

BLAST of CF811434 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9HZW7\|B9HZW7_POPTR	1.250e-11	53.16	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9M7W9\|Q9M7W9_ARATH	1.382e-10	45.35	MJK13.7 protein OS=Arabidopsis thaliana GN=MJK13.7...	[more]
Q9LUQ2\|Q9LUQ2_ARATH	1.382e-10	45.35	Leucine-rich repeat protein; contains similarity t...	[more]
Q8L7Z2\|Q8L7Z2_ARATH	1.382e-10	45.35	AT3g15410/MJK13_7 OS=Arabidopsis thaliana GN=At3g1...	[more]
O49751\|O49751_ARATH	1.382e-10	45.35	Leucine-rich repeat protein OS=Arabidopsis thalian...	[more]
O49750\|O49750_ARATH	1.382e-10	45.35	Leucine-rich repeat protein OS=Arabidopsis thalian...	[more]
O04143\|O04143_SILLA	1.805e-10	45.98	Putative uncharacterized protein OS=Silene latifol...	[more]
D7L435\|D7L435_ARALY	1.996e-9	44.19	Leucine-rich repeat family protein OS=Arabidopsis ...	[more]
B9SRF2\|B9SRF2_RICCO	7.584e-9	45.45	Leucine-rich repeat-containing protein, putative O...	[more]
C0PF76\|C0PF76_MAIZE	8.385e-8	38.37	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of CF811434 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01014371001	3.377e-14	48.84	assembled CDS	[more]

BLAST of CF811434 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G15410.1	5.357e-13	45.35	\| Symbols: \| Leucine-rich repeat (LRR) family pro...	[more]
AT3G15410.2	1.193e-12	47.44	\| Symbols: \| Leucine-rich repeat (LRR) family pro...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015766	Leucine-rich repeat-containing protein	PANTHER	PTHR23155:SF28	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 9..44 score: 1.2
None	No IPR available	GENE3D	3.80.10.10	no description	coord: 8..44 score: 3.4
None	No IPR available	PANTHER	PTHR23155	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 9..44 score: 1.2
None	No IPR available	SEG	seg	seg	coord: 6..19 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF811434 ID=CF811434; Name=CF811434; organism=Vaccinium corymbosum; type=EST; length=350bp
TATTGTAGTGTTACTCTAGAGGGAAAGTGAACACCTTGAGCCTGGGCAAG
TTGGTGTTGGTTGTTTCAACTTCCAAATTTTACTTCCAGGTAAGTGCCCA
ATGAGGTATACAAGAGCTTGGACGCAGTTGGGGAGGGTGAAAACTGGTGG
GAGGCAGTGGAGCTACAGACTAATTTTGGCCCATAATAACATTGAAACAC
TAAGGGGAAGACCACAGNAAATTTGCCTTTACTGTCTGTACTCAATGTTA
GCCACAGCAAGCTTTCCCACCTTCCAGCTGCTGTAGGAGAACTTCACATG
CTAAAATCATTAGATGTGTCCTTTAACCTGAAGGGCCCNNTATCCCTGAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR015766	Leucine-rich repeat-containing protein
noIPR	unintegrated