CF811080
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF811080 vs. TrEMBL
Match: B9S2K8|B9S2K8_RICCO (Putative uncharacterized protein (Fragment) OS=Ricinus communis GN=RCOM_1415780 PE=4 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.026e-16 Identity = 48/71 (67.61%), Postives = 53/71 (74.65%), Query Frame = 3 Query: 390 PHELLTGAV--L*EFSSVWMHVFCSYSCAVKRKIVPKATTSVFLGYAQSGYRCYDVKSKRLDVSLNLFFHG 596 PHELL GA F + V S+SCAVKRKI+PK TT VFLGYAQSGYRC DVKSKRLDVSLN+ F+G Sbjct: 2 PHELLIGAAPSYSIFECLNARVLFSFSCAVKRKIIPKETTFVFLGYAQSGYRCCDVKSKRLDVSLNVLFNG 72
BLAST of CF811080 vs. TrEMBL
Match: B9TAH8|B9TAH8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1990580 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 2.948e-14 Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = -3 Query: 130 G*QTPTERGERMAQESTGSEQTRGAAAWIIVE 225 G Q PTERGERMAQESTGSE+T GAAAWIIVE Sbjct: 22 GWQRPTERGERMAQESTGSERTCGAAAWIIVE 53 HSP 2 Score: 46.2098 bits (108), Expect = 2.948e-14 Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = -1 Query: 282 MFRPFFMHIHIHSQTQKCTIR 344 M RPFFMHIHIHSQTQ+CTIR Sbjct: 1 MSRPFFMHIHIHSQTQRCTIR 21
BLAST of CF811080 vs. TrEMBL
Match: D7TSG9|D7TSG9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_332.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006215001 PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.224e-14 Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = -3 Query: 130 SFTVGSLTCSSG*QTPTERGERMAQESTGSEQTRGAAAWIIVE 258 SF VGSLTCSSG QTPTERGERMAQESTGSE+TRGAAAWIIVE Sbjct: 61 SFNVGSLTCSSGWQTPTERGERMAQESTGSERTRGAAAWIIVE 103
BLAST of CF811080 vs. Vitis vinifera peptide
Match: GSVIVT01006215001 (assembled CDS) HSP 1 Score: 81.6481 bits (200), Expect = 2.941e-16 Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = -3 Query: 130 SFTVGSLTCSSG*QTPTERGERMAQESTGSEQTRGAAAWIIVE 258 SF VGSLTCSSG QTPTERGERMAQESTGSE+TRGAAAWIIVE Sbjct: 61 SFNVGSLTCSSGWQTPTERGERMAQESTGSERTRGAAAWIIVE 103
BLAST of CF811080 vs. TAIR peptide
Match: AT2G07815.1 (| Symbols: | BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:ATMG00180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:3443719-3445533 REVERSE LENGTH=279) HSP 1 Score: 57.7658 bits (138), Expect = 6.564e-9 Identity = 39/79 (49.37%), Postives = 45/79 (56.96%), Query Frame = -2 Query: 44 FSYLL*WLANANREGRT--NGSGIDRFRADSWSCSLDYRRIRGAVLGNDLT----------*KTDAAAARGEQLVWSCG 244 F YLL A ++ G T GSGID FRADS SC LDYRRIRGAVLG ++T T A ++ G Q WS G Sbjct: 75 FMYLLAAFAANSQAGETLSPGSGIDWFRADSGSCCLDYRRIRGAVLGKEMTQLQKKKDRCRLPTRARSSIGGQEPWSGG 153 The following BLAST results are available for this feature:
BLAST of CF811080 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 3
BLAST of CF811080 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of CF811080 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF811080 ID=CF811080; Name=CF811080; organism=Vaccinium corymbosum; type=EST; length=686bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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