CF811080

EST Overview
NameCF811080
Unique NameCF811080
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length686
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CF811080 vs. TrEMBL
Match: B9S2K8|B9S2K8_RICCO (Putative uncharacterized protein (Fragment) OS=Ricinus communis GN=RCOM_1415780 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.026e-16
Identity = 48/71 (67.61%), Postives = 53/71 (74.65%), Query Frame = 3
Query:  390 PHELLTGAV--L*EFSSVWMHVFCSYSCAVKRKIVPKATTSVFLGYAQSGYRCYDVKSKRLDVSLNLFFHG 596
            PHELL GA      F  +   V  S+SCAVKRKI+PK TT VFLGYAQSGYRC DVKSKRLDVSLN+ F+G
Sbjct:    2 PHELLIGAAPSYSIFECLNARVLFSFSCAVKRKIIPKETTFVFLGYAQSGYRCCDVKSKRLDVSLNVLFNG 72          
BLAST of CF811080 vs. TrEMBL
Match: B9TAH8|B9TAH8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1990580 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 2.948e-14
Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = -3
Query:  130 G*QTPTERGERMAQESTGSEQTRGAAAWIIVE 225
            G Q PTERGERMAQESTGSE+T GAAAWIIVE
Sbjct:   22 GWQRPTERGERMAQESTGSERTCGAAAWIIVE 53          

HSP 2 Score: 46.2098 bits (108), Expect = 2.948e-14
Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = -1
Query:  282 MFRPFFMHIHIHSQTQKCTIR 344
            M RPFFMHIHIHSQTQ+CTIR
Sbjct:    1 MSRPFFMHIHIHSQTQRCTIR 21          
BLAST of CF811080 vs. TrEMBL
Match: D7TSG9|D7TSG9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_332.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006215001 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.224e-14
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = -3
Query:  130 SFTVGSLTCSSG*QTPTERGERMAQESTGSEQTRGAAAWIIVE 258
            SF VGSLTCSSG QTPTERGERMAQESTGSE+TRGAAAWIIVE
Sbjct:   61 SFNVGSLTCSSGWQTPTERGERMAQESTGSERTRGAAAWIIVE 103          
BLAST of CF811080 vs. Vitis vinifera peptide
Match: GSVIVT01006215001 (assembled CDS)

HSP 1 Score: 81.6481 bits (200), Expect = 2.941e-16
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = -3
Query:  130 SFTVGSLTCSSG*QTPTERGERMAQESTGSEQTRGAAAWIIVE 258
            SF VGSLTCSSG QTPTERGERMAQESTGSE+TRGAAAWIIVE
Sbjct:   61 SFNVGSLTCSSGWQTPTERGERMAQESTGSERTRGAAAWIIVE 103          
BLAST of CF811080 vs. TAIR peptide
Match: AT2G07815.1 (| Symbols: | BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:ATMG00180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:3443719-3445533 REVERSE LENGTH=279)

HSP 1 Score: 57.7658 bits (138), Expect = 6.564e-9
Identity = 39/79 (49.37%), Postives = 45/79 (56.96%), Query Frame = -2
Query:   44 FSYLL*WLANANREGRT--NGSGIDRFRADSWSCSLDYRRIRGAVLGNDLT----------*KTDAAAARGEQLVWSCG 244
            F YLL   A  ++ G T   GSGID FRADS SC LDYRRIRGAVLG ++T            T A ++ G Q  WS G
Sbjct:   75 FMYLLAAFAANSQAGETLSPGSGIDWFRADSGSCCLDYRRIRGAVLGKEMTQLQKKKDRCRLPTRARSSIGGQEPWSGG 153          
The following BLAST results are available for this feature:
BLAST of CF811080 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 3
Match NameE-valueIdentityDescription
B9S2K8|B9S2K8_RICCO1.026e-1667.61Putative uncharacterized protein (Fragment) OS=Ric... [more]
B9TAH8|B9TAH8_RICCO2.948e-1487.50Putative uncharacterized protein OS=Ricinus commun... [more]
D7TSG9|D7TSG9_VITVI6.224e-1493.02Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of CF811080 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010062150012.941e-1693.02assembled CDS[more]
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BLAST of CF811080 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G07815.16.564e-949.37| Symbols: | BEST Arabidopsis thaliana protein ma... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..10
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF811080 ID=CF811080; Name=CF811080; organism=Vaccinium corymbosum; type=EST; length=686bp
TCGAGCTGGGGCGTCATTTCATTCTCGTAACGGGAATGAGTGCACCGCAA
GACCAGACAAGTTGCTCCCCCCTCGCAGCGGCGGCATCTGTCTTTTAAGT
TAAGTCATTTCCTAAGACGGCTCCTCTTATTCTACGATAATCCAAGCTGC
AGCTCCACGAGTCTGCTCGGAACCGGTCGATTCCTGAGCCATTCGTTCTC
CCCTCTCGGTTGGCGTTTGCTAGCCACTAGAGCAAGTAAGAGAACCTACA
GTGAATGAACTTAAAGAACCACAGATTTTGACCGGATTGTACACTTTTGT
GTCTGGCTATGTATATGGATGTGCATAAAGAAGGGACGGAACATCTCTCT
CCTTTGGGGGGAAGAGAGAGGGAAGAAGCTGCAGCGGCCCCTCACGAACT
TCTTACTGGGGCAGTACTATAGGAATTTTCTAGTGTTTGGATGCACGTGT
TTTGTTCATATTCCTGCGCAGTTAAGAGAAAAATTGTCCCCAAGGCAACC
ACTTCTGTCTTTCTTGGATATGCTCAGTCCGGGTATAGATGCTATGACGT
GAAATCCAAGAGACTCGATGTATCCTTGAATCTTTTCTTTCATGGGGTCG
CTTCATATTTTCCTTAACCTAATTAATAAGCCCCGGGGGGGGGATGGAGA
TGTATTGCGGCCTTCTCCTGNTCATCAAGTCGAACR
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated