CV090483 | GDV

EST Overview


Name	CV090483
Unique Name	CV090483
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	677

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090483 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s17330.1 ()

HSP 1 Score: 51.2174 bits (121), Expect = 7.747e-10
Identity = 25/54 (46.30%), Postives = 28/54 (51.85%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  ETA     FPTT+ +      YI   RC  A  E   ECDKFA+YY  LCP
Sbjct:  116 IKIETAPADYRFPTTNQTRHCFTRYIEYHRCVAAKGEDASECDKFAKYYRSLCP 169

HSP 2 Score: 29.6462 bits (65), Expect = 7.747e-10
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 1

Query:  550 NEWIXRWXELXENDTFPG 603
            +EW+ RW E   N TFPG
Sbjct:  170 SEWVERWNEQRSNGTFPG 187

[Close]

BLAST of CV090483 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s10020.1 ()

HSP 1 Score: 53.9138 bits (128), Expect = 6.182e-9
Identity = 26/54 (48.15%), Postives = 29/54 (53.70%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  ETA     FPTT+ +      YI   RC  A  EG  ECDKFA+YY  LCP
Sbjct:  110 IKLETAPADYRFPTTNQTRHCFTRYIEYHRCVAAKGEGASECDKFAKYYRSLCP 163

HSP 2 Score: 23.8682 bits (50), Expect = 6.182e-9
Identity = 11/32 (34.38%), Postives = 16/32 (50.00%), Query Frame = 2

Query:  272 PPLLKKVRTEXAXXTAXESXENXEQEDSCDQD 367
            PPL  + +TE     A ES E    ++S  +D
Sbjct:   52 PPLAAEEKTEDTPAAAEESTEAPTTDESSSED 83

[Close]

BLAST of CV090483 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s10890.1 ()

HSP 1 Score: 43.8986 bits (102), Expect = 3.321e-8
Identity = 20/54 (37.04%), Postives = 28/54 (51.85%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  +TA     FPTT+ +      YI   RC  A  +   +C++FA+YY  LCP
Sbjct:    5 IELKTAPADYRFPTTNQTRHCFTRYIEFHRCVAAKGDEGNDCERFAKYYRSLCP 58

HSP 2 Score: 31.5722 bits (70), Expect = 3.321e-8
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 1

Query:  550 NEWIXRWXELXENDTFPG 603
            +EW+ RW E  EN TFPG
Sbjct:   59 SEWVERWNEQRENGTFPG 76

[Close]

BLAST of CV090483 vs. P. persica 1.0 peptide
Match: ppa012107m ()

HSP 1 Score: 53.5286 bits (127), Expect = 3.161e-11
Identity = 25/57 (43.86%), Postives = 30/57 (52.63%), Query Frame = 3

Query:  378 TXXIXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            T  I  ETA     FPTT+ +      Y+   RC  A  E  PECDKFA++Y  LCP
Sbjct:  107 TPAIKIETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGEDAPECDKFAKFYRSLCP 163

HSP 2 Score: 31.5722 bits (70), Expect = 3.161e-11
Identity = 12/17 (70.59%), Postives = 12/17 (70.59%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EWI RW E  EN TFPG
Sbjct:  165 EWIERWNEQRENGTFPG 181

[Close]

BLAST of CV090483 vs. P. persica 1.0 peptide
Match: ppa022392m ()

HSP 1 Score: 46.2098 bits (108), Expect = 1.295e-8
Identity = 22/54 (40.74%), Postives = 28/54 (51.85%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  +TA     FPTT+ +      YI   RC  A  E   EC++FA+YY  LCP
Sbjct:   46 IELKTAPVDFRFPTTNQTRHCFTRYIEFHRCVAAKGEESNECERFAKYYRSLCP 99

HSP 2 Score: 30.0314 bits (66), Expect = 1.295e-8
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EWI RW E  EN +FPG
Sbjct:  101 EWIERWAEQRENGSFPG 117

[Close]

BLAST of CV090483 vs. TrEMBL
Match: C6SYQ4|C6SYQ4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.295e-10
Identity = 28/57 (49.12%), Postives = 31/57 (54.39%), Query Frame = 3

Query:  378 TXXIXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            T  I  ETA     FPTT+ +      YI   RC  A  EG PECDKFA+YY  LCP
Sbjct:   98 TPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECDKFAKYYRSLCP 154

HSP 2 Score: 31.187 bits (69), Expect = 3.295e-10
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EW+ RW E  EN TFPG
Sbjct:  156 EWVDRWNEQRENGTFPG 172

[Close]

BLAST of CV090483 vs. TrEMBL
Match: B9RJN9|B9RJN9_RICCO (Cytochrome C oxidase polypeptide vib, putative OS=Ricinus communis GN=RCOM_1037110 PE=4 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 9.288e-10
Identity = 26/57 (45.61%), Postives = 31/57 (54.39%), Query Frame = 3

Query:  378 TXXIXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            T  I  ETA     FPTT+ +      Y+   RC  A  EG PECDKFA++Y  LCP
Sbjct:  115 TPKIKLETAPADFRFPTTNQTRHCFTRYVEYHRCTAAKGEGAPECDKFAKFYRSLCP 171

HSP 2 Score: 31.5722 bits (70), Expect = 9.288e-10
Identity = 12/17 (70.59%), Postives = 12/17 (70.59%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EWI RW E  EN TFPG
Sbjct:  173 EWIDRWNEQRENGTFPG 189

[Close]

BLAST of CV090483 vs. TrEMBL
Match: A9PHL0|A9PHL0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 9.960e-10
Identity = 26/54 (48.15%), Postives = 29/54 (53.70%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  ETA     FPTT+ +      YI   RC  A  EG  ECDKFA+YY  LCP
Sbjct:  110 IKLETAPADYRFPTTNQTRHCFTRYIEYHRCVAAKGEGASECDKFAKYYRSLCP 163

HSP 2 Score: 29.261 bits (64), Expect = 9.960e-10
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 1

Query:  550 NEWIXRWXELXENDTFPG 603
            +EW+ RW E   N TFPG
Sbjct:  164 SEWVERWNEQRANGTFPG 181

HSP 3 Score: 23.8682 bits (50), Expect = 9.960e-10
Identity = 11/32 (34.38%), Postives = 16/32 (50.00%), Query Frame = 2

Query:  272 PPLLKKVRTEXAXXTAXESXENXEQEDSCDQD 367
            PPL  + +TE     A ES E    ++S  +D
Sbjct:   52 PPLAAEEKTEDTPAAAEESTEAPTTDESSSED 83

[Close]

BLAST of CV090483 vs. TrEMBL
Match: A3BMA7|A3BMA7_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_25165 PE=4 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.185e-9
Identity = 26/54 (48.15%), Postives = 30/54 (55.56%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  ETA     FPTT+ +      YI   RC  A  EG PEC+KFA+YY  LCP
Sbjct:  182 IKIETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECEKFAKYYRSLCP 235

HSP 2 Score: 31.9574 bits (71), Expect = 1.185e-9
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1

Query:  550 NEWIXRWXELXENDTFPG 603
            +EWI RW E  EN TFPG
Sbjct:  236 SEWIERWNEQRENGTFPG 253

[Close]

BLAST of CV090483 vs. TrEMBL
Match: C5X2G9|C5X2G9_SORBI (Putative uncharacterized protein Sb02g039590 OS=Sorghum bicolor GN=Sb02g039590 PE=4 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.196e-9
Identity = 26/54 (48.15%), Postives = 30/54 (55.56%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  ETA     FPTT+ +      YI   RC  A  EG PEC+KFA+YY  LCP
Sbjct:  143 IKIETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECEKFAKYYRSLCP 196

HSP 2 Score: 31.9574 bits (71), Expect = 1.196e-9
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1

Query:  550 NEWIXRWXELXENDTFPG 603
            +EWI RW E  EN TFPG
Sbjct:  197 SEWIERWNEQRENGTFPG 214

[Close]

BLAST of CV090483 vs. TrEMBL
Match: B8B8M7|B8B8M7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26908 PE=4 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.206e-9
Identity = 26/54 (48.15%), Postives = 30/54 (55.56%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  ETA     FPTT+ +      YI   RC  A  EG PEC+KFA+YY  LCP
Sbjct:  117 IKIETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECEKFAKYYRSLCP 170

HSP 2 Score: 31.9574 bits (71), Expect = 1.206e-9
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1

Query:  550 NEWIXRWXELXENDTFPG 603
            +EWI RW E  EN TFPG
Sbjct:  171 SEWIERWNEQRENGTFPG 188

[Close]

BLAST of CV090483 vs. TrEMBL
Match: Q8LHA3|Q8LHA3_ORYSJ (Putative cytochrome c oxidase subunit 6b-1 OS=Oryza sativa subsp. japonica GN=P0594D10.126 PE=4 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.215e-9
Identity = 26/54 (48.15%), Postives = 30/54 (55.56%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  ETA     FPTT+ +      YI   RC  A  EG PEC+KFA+YY  LCP
Sbjct:  101 IKIETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECEKFAKYYRSLCP 154

HSP 2 Score: 31.9574 bits (71), Expect = 1.215e-9
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1

Query:  550 NEWIXRWXELXENDTFPG 603
            +EWI RW E  EN TFPG
Sbjct:  155 SEWIERWNEQRENGTFPG 172

[Close]

BLAST of CV090483 vs. TrEMBL
Match: D7T477|D7T477_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_67.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032622001 PE=4 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 2.702e-9
Identity = 24/57 (42.11%), Postives = 29/57 (50.88%), Query Frame = 3

Query:  378 TXXIXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            T  I  ETA     FP+T+ +      YI   RC     EG  ECDKFA++Y  LCP
Sbjct:  148 TSEIKLETAPADFRFPSTNQTRHCFTRYIEYHRCTAVKGEGASECDKFAKFYRSLCP 204

HSP 2 Score: 31.187 bits (69), Expect = 2.702e-9
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EW+ RW E  EN TFPG
Sbjct:  206 EWVERWNEQRENGTFPG 222

HSP 3 Score: 23.8682 bits (50), Expect = 2.702e-9
Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 2

Query:  296 TEXAXXTAXESXENXEQEDSCDQDV 370
            +E     A ES  N E+E+S DQ+V
Sbjct:  121 SEATPDAAEESSNNVEEENSGDQEV 145

[Close]

BLAST of CV090483 vs. TrEMBL
Match: B8AQM5|B8AQM5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11877 PE=4 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 5.778e-9
Identity = 25/54 (46.30%), Postives = 29/54 (53.70%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  ETA     FPTT+ +      Y+   RC  A  E  PECDKFA+YY  LCP
Sbjct:  112 IKIETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGEDAPECDKFAKYYRSLCP 165

HSP 2 Score: 31.187 bits (69), Expect = 5.778e-9
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EW+ RW E  EN TFPG
Sbjct:  167 EWVERWNEQRENGTFPG 183

[Close]

BLAST of CV090483 vs. TrEMBL
Match: B4FCQ4|B4FCQ4_MAIZE (Cytochrome c oxidase subunit OS=Zea mays PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 5.817e-9
Identity = 25/54 (46.30%), Postives = 29/54 (53.70%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  ETA     FPTT+ +      Y+   RC  A  E  PECDKFA+YY  LCP
Sbjct:   99 IKIETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGEDAPECDKFAKYYRSLCP 152

HSP 2 Score: 31.187 bits (69), Expect = 5.817e-9
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EW+ RW E  EN TFPG
Sbjct:  154 EWVDRWNEQRENGTFPG 170

[Close]

BLAST of CV090483 vs. Vitis vinifera peptide
Match: GSVIVT01032622001 (assembled CDS)

HSP 1 Score: 50.447 bits (119), Expect = 1.251e-11
Identity = 24/57 (42.11%), Postives = 29/57 (50.88%), Query Frame = 3

Query:  378 TXXIXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            T  I  ETA     FP+T+ +      YI   RC     EG  ECDKFA++Y  LCP
Sbjct:  148 TSEIKLETAPADFRFPSTNQTRHCFTRYIEYHRCTAVKGEGASECDKFAKFYRSLCP 204

HSP 2 Score: 31.187 bits (69), Expect = 1.251e-11
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EW+ RW E  EN TFPG
Sbjct:  206 EWVERWNEQRENGTFPG 222

HSP 3 Score: 23.8682 bits (50), Expect = 1.251e-11
Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 2

Query:  296 TEXAXXTAXESXENXEQEDSCDQDV 370
            +E     A ES  N E+E+S DQ+V
Sbjct:  121 SEATPDAAEESSNNVEEENSGDQEV 145

[Close]

BLAST of CV090483 vs. Vitis vinifera peptide
Match: GSVIVT01032620001 (assembled CDS)

HSP 1 Score: 51.9878 bits (123), Expect = 9.899e-11
Identity = 25/57 (43.86%), Postives = 30/57 (52.63%), Query Frame = 3

Query:  378 TXXIXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            T  I  ETA     FP+T+ +      YI   RC  A  EG  ECDKFA++Y  LCP
Sbjct:  115 TSEIKLETAPADFRFPSTNQTRHCFTRYIEYHRCTAAKGEGATECDKFAKFYRSLCP 171

HSP 2 Score: 31.187 bits (69), Expect = 9.899e-11
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EW+ RW E  EN TFPG
Sbjct:  173 EWVERWNEQRENGTFPG 189

[Close]

BLAST of CV090483 vs. Vitis vinifera peptide
Match: GSVIVT01023725001 (assembled CDS)

HSP 1 Score: 44.669 bits (104), Expect = 2.626e-8
Identity = 20/54 (37.04%), Postives = 28/54 (51.85%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            +  +TA     FP+T+ +      YI   RC  A  E   +C+KFA+YY  LCP
Sbjct:    4 VHLQTAPADFRFPSTNQTRHCFTRYIEFHRCLAAKGEESGDCEKFAKYYRSLCP 57

HSP 2 Score: 30.4166 bits (67), Expect = 2.626e-8
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EWI +W E  EN TFPG
Sbjct:   59 EWIEKWNEQRENGTFPG 75

[Close]

BLAST of CV090483 vs. TAIR peptide
Match: AT1G22450.1 (| Symbols: COX6B, ATCOX6B2 | cytochrome C oxidase 6B | chr1:7925447-7926918 FORWARD LENGTH=191)

HSP 1 Score: 51.2174 bits (121), Expect = 1.855e-10
Identity = 23/54 (42.59%), Postives = 29/54 (53.70%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  ETA     FPTT+ +      Y+   RC  A  +  PECDKFA++Y  LCP
Sbjct:  117 IKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCP 170

HSP 2 Score: 31.5722 bits (70), Expect = 1.855e-10
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 1

Query:  550 NEWIXRWXELXENDTFPG 603
            +EW+ RW E  EN TFPG
Sbjct:  171 SEWVDRWNEQRENGTFPG 188

[Close]

BLAST of CV090483 vs. TAIR peptide
Match: AT4G28060.1 (| Symbols: | Cytochrome c oxidase, subunit Vib family protein | chr4:13944018-13945602 REVERSE LENGTH=78)

HSP 1 Score: 46.595 bits (109), Expect = 6.377e-8
Identity = 22/54 (40.74%), Postives = 28/54 (51.85%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  +TA     FPTT+ +      YI   RC  A  E   EC++FA+YY  LCP
Sbjct:    5 IELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCP 58

HSP 2 Score: 27.7202 bits (60), Expect = 6.377e-8
Identity = 9/17 (52.94%), Postives = 11/17 (64.71%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EW+ +W E  E  TFPG
Sbjct:   60 EWVDKWNEQRETGTFPG 76

[Close]

BLAST of CV090483 vs. TAIR peptide
Match: AT5G57815.1 (| Symbols: | Cytochrome c oxidase, subunit Vib family protein | chr5:23426753-23427637 FORWARD LENGTH=78)

HSP 1 Score: 45.0542 bits (105), Expect = 1.391e-7
Identity = 21/54 (38.89%), Postives = 28/54 (51.85%), Query Frame = 3

Query:  387 IXXETAXXXXXFPTTSXSMXXXXXYIXXXRCXXADXEGXPECDKFAQYYXXLCP 548
            I  +TA     FPTT+ +      YI   RC  A  E   +C++FA+YY  LCP
Sbjct:    5 IELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCP 58

HSP 2 Score: 28.1054 bits (61), Expect = 1.391e-7
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 1

Query:  553 EWIXRWXELXENDTFPG 603
            EW+ +W E  E+ TFPG
Sbjct:   60 EWVDKWNEQRESGTFPG 76

The following BLAST results are available for this feature:

BLAST of CV090483 vs. Populus trichocarpa peptide v2.0
BLAST of CV090483 vs. P. persica 1.0 peptide
BLAST of CV090483 vs. TrEMBL
BLAST of CV090483 vs. Vitis vinifera peptide
BLAST of CV090483 vs. TAIR peptide

BLAST of CV090483 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0005s17330.1	7.747e-10	46.30	[more]
POPTR_0002s10020.1	6.182e-9	48.15	[more]
POPTR_0018s10890.1	3.321e-8	37.04	[more]

BLAST of CV090483 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa012107m	3.161e-11	43.86		[more]
ppa022392m	1.295e-8	40.74		[more]

BLAST of CV090483 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
C6SYQ4\|C6SYQ4_SOYBN	3.295e-10	49.12	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9RJN9\|B9RJN9_RICCO	9.288e-10	45.61	Cytochrome C oxidase polypeptide vib, putative OS=...	[more]
A9PHL0\|A9PHL0_POPTR	9.960e-10	48.15	Putative uncharacterized protein OS=Populus tricho...	[more]
A3BMA7\|A3BMA7_ORYSJ	1.185e-9	48.15	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C5X2G9\|C5X2G9_SORBI	1.196e-9	48.15	Putative uncharacterized protein Sb02g039590 OS=So...	[more]
B8B8M7\|B8B8M7_ORYSI	1.206e-9	48.15	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q8LHA3\|Q8LHA3_ORYSJ	1.215e-9	48.15	Putative cytochrome c oxidase subunit 6b-1 OS=Oryz...	[more]
D7T477\|D7T477_VITVI	2.702e-9	42.11	Whole genome shotgun sequence of line PN40024, sca...	[more]
B8AQM5\|B8AQM5_ORYSI	5.778e-9	46.30	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B4FCQ4\|B4FCQ4_MAIZE	5.817e-9	46.30	Cytochrome c oxidase subunit OS=Zea mays PE=2 SV=1	[more]

BLAST of CV090483 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 3


Match Name	E-value	Identity	Description
GSVIVT01032622001	1.251e-11	42.11	assembled CDS	[more]
GSVIVT01032620001	9.899e-11	43.86	assembled CDS	[more]
GSVIVT01023725001	2.626e-8	37.04	assembled CDS	[more]

BLAST of CV090483 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G22450.1	1.855e-10	42.59	\| Symbols: COX6B, ATCOX6B2 \| cytochrome C oxidase ...	[more]
AT4G28060.1	6.377e-8	40.74	\| Symbols: \| Cytochrome c oxidase, subunit Vib fa...	[more]
AT5G57815.1	1.391e-7	38.89	\| Symbols: \| Cytochrome c oxidase, subunit Vib fa...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 27..41 score
None	No IPR available	SEG	seg	seg	coord: 6..17 score: NAcoord: 23..37 score
None	No IPR available	SEG	seg	seg	coord: 12..21 score: NAcoord: 39..51 score
None	No IPR available	SEG	seg	seg	coord: 54..66 score
None	No IPR available	SEG	seg	seg	coord: 5..13 score: NAcoord: 31..49 score: NAcoord: 54..63 score
None	No IPR available	SEG	seg	seg	coord: 21..28 score
None	No IPR available	SEG	seg	seg	coord: 6..17 score: NAcoord: 25..32 score: NAcoord: 36..42 score
None	No IPR available	SEG	seg	seg	coord: 2..14 score: NAcoord: 16..36 score
None	No IPR available	SEG	seg	seg	coord: 30..44 score: NAcoord: 87..96 score: NAcoord: 119..127 score: NAcoord: 131..169 score: NAcoord: 204..212 score
IPR003213	Cytochrome c oxidase, subunit VIb	GENE3D	1.10.10.140	no description	coord: 34..90 score: 5.8

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090483 ID=CV090483; Name=CV090483; organism=Vaccinium corymbosum; type=EST; length=677bp
GCNGAAGCTCCCTCTTNCAATCCATCAATAGGNCNANGNCGTACACCACA
CACAAGGCCAGNCCCTAAATGAGACNATATATTATGTGTTCCAAAGAATG
GGAANCATACATATNGGTACAAAATGTGCCAGAAGAACCCGTAGGTGAAG
CAACCCTGGCCACACCACATCGTGAGTTNTGTCCNCAACCACCACAAACT
GACGAAAACCCAGNTGNCNGTACTAATGNAGCTGCCCCGGNTGCTGCTGA
NNAANGTANNGAAGCTCTCTNCCNCCNCTACTGAAGAAAGTGCGCACNGA
ANCNGCTGANGNTACTGCTGNNGAAAGTNTNGAGAATGNTGAACAGGAAG
ACTCNTGTGATCAAGATGTCTGGTTANACNCNGNAGATTGNGNTNGAGAC
NGCNNCNNNANATTNTCNNTTCCCAACTACNAGTCNNTCTATGNATNGCT
NTNCCCNATACATTGNNNATNATCGGTGTGNANCTGCCGATNTGGAAGGT
GNGCCTGAGTGCGACAAGTTTGCACAATACTACNGGTNTCTTTGCCCTGA
ACGAATGGATTNATCGGTGGANCGAGCTNANGGAGAATGACACTTTTCCT
GGTACAGTGCNTNCGGTGCCTGCTNAAGATAAATATAATTTTGTTCTAGA
CNTTGTATCCAACNTGCTTGGATCTGC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004129	cytochrome-c oxidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005739	mitochondrion

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated
IPR003213	Cyt_c_oxidase_su6B