CV189886
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV189886 vs. P. persica 1.0 peptide
Match: ppa017256m () HSP 1 Score: 92.0485 bits (227), Expect = 8.816e-20 Identity = 40/56 (71.43%), Postives = 51/56 (91.07%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEFE 170 VE++HGK+K+LVSF CETLK++K AEDHI++FMPKLAG+DA+VN+G MTI GL FE Sbjct: 96 VEEQHGKDKLLVSFNCETLKSDKAAEDHIKQFMPKLAGLDAIVNIGKMTIAGLNFE 151
BLAST of CV189886 vs. TrEMBL
Match: D7SXI5|D7SXI5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011493001 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.850e-18 Identity = 44/56 (78.57%), Postives = 52/56 (92.86%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEFE 170 VEQ+HGKNKI+VSFECETLKA+K AEDHIR+FMPKLAG+DAVVN+G M+I GL+ E Sbjct: 122 VEQKHGKNKIVVSFECETLKADKAAEDHIRQFMPKLAGLDAVVNIGRMSITGLDLE 177
BLAST of CV189886 vs. TrEMBL
Match: A5AYX8|A5AYX8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009952 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.850e-18 Identity = 44/56 (78.57%), Postives = 52/56 (92.86%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEFE 170 VEQ+HGKNKI+VSFECETLKA+K AEDHIR+FMPKLAG+DAVVN+G M+I GL+ E Sbjct: 106 VEQKHGKNKIVVSFECETLKADKAAEDHIRQFMPKLAGLDAVVNIGRMSITGLDLE 161
BLAST of CV189886 vs. TrEMBL
Match: D7LNW4|D7LNW4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484699 PE=4 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.155e-18 Identity = 42/57 (73.68%), Postives = 51/57 (89.47%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEFEV 173 VE++HGK K+ VSFECETLKA+K AEDHIR+FMPKLAG+DAV+N+GPM I GL+F V Sbjct: 114 VEEKHGKKKVSVSFECETLKADKAAEDHIRQFMPKLAGLDAVINIGPMKISGLDFAV 170
BLAST of CV189886 vs. TrEMBL
Match: B9IK43|B9IK43_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_736423 PE=4 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.045e-17 Identity = 42/56 (75.00%), Postives = 51/56 (91.07%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEFE 170 VE++HGK KI VSFECETLKA+K AEDHI++FMPKLAG+DAVVN+G M+I GL+FE Sbjct: 118 VEEKHGKKKIHVSFECETLKADKAAEDHIKQFMPKLAGLDAVVNIGRMSISGLDFE 173
BLAST of CV189886 vs. TrEMBL
Match: A9P9G3|A9P9G3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.045e-17 Identity = 42/56 (75.00%), Postives = 51/56 (91.07%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEFE 170 VE++HGK KI VSFECETLKA+K AEDHI++FMPKLAG+DAVVN+G M+I GL+FE Sbjct: 118 VEEKHGKKKIHVSFECETLKADKAAEDHIKQFMPKLAGLDAVVNIGRMSISGLDFE 173
BLAST of CV189886 vs. TrEMBL
Match: B9SJA4|B9SJA4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0524310 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.015e-16 Identity = 41/55 (74.55%), Postives = 48/55 (87.27%), Query Frame = 3 Query: 6 EQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEFE 170 E++HGK KI VSF CETLKA+K AE+HIRKFMPKLAG+DAVVN+G M I GL+FE Sbjct: 110 EEKHGKKKIFVSFVCETLKADKAAEEHIRKFMPKLAGLDAVVNIGKMRISGLDFE 164
BLAST of CV189886 vs. TrEMBL
Match: C6SXS4|C6SXS4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.037e-16 Identity = 41/55 (74.55%), Postives = 47/55 (85.45%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEF 167 +E + GK +I VSFECETLKA K AEDHIRKFMPKLAG+DAVVN+G MTI GL+F Sbjct: 107 IEPKDGKKRISVSFECETLKAGKAAEDHIRKFMPKLAGLDAVVNIGKMTISGLDF 161
BLAST of CV189886 vs. TrEMBL
Match: C0HIB1|C0HIB1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.500e-15 Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEFEVGGNAR 188 VE+EHG K+L+SFECETLKA+K+AEDHI K+MP L G+DAVVN+G M+I G+ + R Sbjct: 154 VEKEHGNQKVLLSFECETLKADKDAEDHIAKYMPNLCGLDAVVNIGKMSISGINLDEDAEPR 215
BLAST of CV189886 vs. TrEMBL
Match: Q10NV3|Q10NV3_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g15190 PE=4 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.991e-13 Identity = 32/56 (57.14%), Postives = 45/56 (80.36%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEFE 170 VE++HG K +SFECETLKA+K A++HI K+MP L+GMDA+VN+G M+I G+ + Sbjct: 129 VEKKHGNRKFSISFECETLKADKAADEHISKYMPNLSGMDAIVNIGKMSISGINLD 184
BLAST of CV189886 vs. TrEMBL
Match: Q0DTC3|Q0DTC3_ORYSJ (Os03g0257000 protein OS=Oryza sativa subsp. japonica GN=Os03g0257000 PE=4 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.991e-13 Identity = 32/56 (57.14%), Postives = 45/56 (80.36%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEFE 170 VE++HG K +SFECETLKA+K A++HI K+MP L+GMDA+VN+G M+I G+ + Sbjct: 110 VEKKHGNRKFSISFECETLKADKAADEHISKYMPNLSGMDAIVNIGKMSISGINLD 165
BLAST of CV189886 vs. Vitis vinifera peptide
Match: GSVIVT01011493001 (assembled CDS) HSP 1 Score: 95.5153 bits (236), Expect = 6.922e-21 Identity = 44/56 (78.57%), Postives = 52/56 (92.86%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEFE 170 VEQ+HGKNKI+VSFECETLKA+K AEDHIR+FMPKLAG+DAVVN+G M+I GL+ E Sbjct: 122 VEQKHGKNKIVVSFECETLKADKAAEDHIRQFMPKLAGLDAVVNIGRMSITGLDLE 177
BLAST of CV189886 vs. TAIR peptide
Match: AT3G29280.1 (| Symbols: | unknown protein; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:11236705-11237947 REVERSE LENGTH=178) HSP 1 Score: 92.0485 bits (227), Expect = 1.082e-19 Identity = 40/55 (72.73%), Postives = 50/55 (90.91%), Query Frame = 3 Query: 3 VEQEHGKNKILVSFECETLKAEKEAEDHIRKFMPKLAGMDAVVNVGPMTIEGLEF 167 VE++HGK K+ VSFECETLKA++ AEDHIR+FMPKLAG+DAV+N+GPM I GL+F Sbjct: 115 VEEKHGKKKVSVSFECETLKADEAAEDHIRQFMPKLAGLDAVINIGPMKISGLDF 169 The following BLAST results are available for this feature:
BLAST of CV189886 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CV189886 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 10
BLAST of CV189886 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of CV189886 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV189886 ID=CV189886; Name=CV189886; organism=Vaccinium corymbosum; type=EST; length=401bpback to top |