CV191383 | GDV

EST Overview


Name	CV191383
Unique Name	CV191383
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	470

Libraries


Library Name	Type
LIBEST_016374 Vco01	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10

Homology

[Close]

BLAST of CV191383 vs. DB:swissprot:display
Match: FB253_ARATH (F-box protein At5g07610 OS=Arabidopsis thaliana GN=At5g07610 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 9.752e-9
Identity = 45/164 (27.44%), Postives = 78/164 (47.56%), Query Frame = 1

Query:   28 SYIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCV---SSSYIHNASQ-----LAIYASQCASWKYV-----SLESFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVP---------PDPNLSKSITIYFGECGGRLLLIEL 453
            +Y + N TT+++  L  +      S      L +DP++SP+YKV C+   S++   +AS      + +Y+S    W+ V     S  +FI+F   V WNG + W   S R+ +    D++T+++ +  +P         PDP     I ++  E  G L  IE+
Sbjct:  149 NYYVYNPTTKQYTLLHQIAGHIALS------LAFDPSRSPHYKVFCLRGRSNNSFSSASDSELYHIEVYSSNEGLWRRVVPVPTSPSTFIEFSYSVFWNGAVNWYGFSSRDCL--SFDINTQEIKILPLPDHEHEDEPLPDPR----ILMFLDESQGNLYYIEV 300

[Close]

BLAST of CV191383 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s26050.1 ()

HSP 1 Score: 76.6406 bits (187), Expect = 7.656e-15
Identity = 51/153 (33.33%), Postives = 75/153 (49.02%), Query Frame = 1

Query:   10 CCYGDRSYIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSYIHNASQLAIYASQCASWK----YVSLESFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDP-NLSKSITIYFGECGGRLLLIEL 453
            C   DR Y IC  TT+++  LP       C       + YDPT SP+YK++CV  S     + + +Y S   SW+    +      + F+RGV  N  + W+S   R  +  R D++ E++    +PP P   S+    YFGE GG L LIE+
Sbjct:  143 CHEDDRKYYICKPTTKQYHQLPKPG----CKIVFGINIAYDPTISPHYKIICVCDS-----NAIKMYDSAIGSWRVSGNHQVFSHVLLFNRGVFLNRALHWIS---RGALALRFDIEQERMLTMPMPPIPEGRSERRLGYFGESGGHLCLIEI 283

[Close]

BLAST of CV191383 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s13270.1 ()

HSP 1 Score: 72.4034 bits (176), Expect = 1.444e-13
Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 1

Query:   31 YIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSYIHNASQLAIYASQCASWKYVSLE------SFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNLSKSITI-YFGECGGRLLLIELPTIDA 468
            Y + N TT++F+ L   +     S   +  L++DP+KSPYYKV+C+   Y  +  ++ +Y+S+   WK +SL+      S +  + GV WNG I W  +SR  + +  L +D E L     PP P   ++    YFGE GG+L  I    ID+
Sbjct:  138 YYVFNPTTRQFVELTLPSGDGIRSNRIQ--LVFDPSKSPYYKVLCI--HYFKSLLEIHVYSSETKIWK-LSLKQENFDSSSVDLNNGVFWNGAIHW--ISRMGNGFCFL-LDKECLQAMPSPPLPESWETSNFRYFGESGGQLHFIGSSNIDS 282

[Close]

BLAST of CV191383 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s21500.1 ()

HSP 1 Score: 68.1662 bits (165), Expect = 2.723e-12
Identity = 47/142 (33.10%), Postives = 73/142 (51.41%), Query Frame = 1

Query:   37 ICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSYIHNASQLAIYASQCASWKY-VSLESF----IKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNLSKSITIYFGECGGRLLLI 447
            I N TT++F  LP   +      +    L++DP +SP Y+VVC+   + ++  ++ +Y+S+   WK  V LE+F    + F  GV WNG + WMS      +   LD++  + T+ R P   N       YFGE GG+L  I
Sbjct:  154 IFNPTTRQFALLPLPPNDG--KYFTRIQLVFDPLESPRYRVVCI--QFFNSELKIYVYSSETKDWKLSVKLENFDLLSVNFTDGVSWNGAVHWMS-PMGNGLSFLLDMECLQ-TIPRPPLPENWQDKNFRYFGESGGQLHFI 289

[Close]

BLAST of CV191383 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s06420.1 ()

HSP 1 Score: 64.6994 bits (156), Expect = 3.011e-11
Identity = 52/149 (34.90%), Postives = 73/149 (48.99%), Query Frame = 1

Query:   34 IICNLTTQKFIALPSV-----NSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSY-IHNASQLAIYASQCASWKYV--SLE--SFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNLSKSI--TIYFGECGGRLLL 444
            IICN TT++F  L        NS  + S Y    L +DP KS +YK++C+   Y +    Q+ +Y+S+  SW ++  SLE  +   F  GV  N  I W S    E      DV+TE L +  +PP  +        +YFGE  GRL L
Sbjct:  141 IICNPTTKQFKTLSFPVPKFGNSKTYSSFYG---LAFDPLKSHHYKIICLHVDYRVSKNPQIYLYSSRTNSWSFLQNSLEAPTLYGFVNGVFCNDAIHWCSY---EQTTLYFDVNTESLKIMPMPPIFSTVNRFREMMYFGESRGRLHL 283

[Close]

BLAST of CV191383 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s06160.1 ()

HSP 1 Score: 50.8322 bits (120), Expect = 4.499e-7
Identity = 37/144 (25.69%), Postives = 64/144 (44.44%), Query Frame = 1

Query:   31 YIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSYIHNAS-QLAIYASQCASWKYV----SLESFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNLSKSITIYFGECGGRLLLI 447
            Y +CN TT++F  L     +     Y    L +DP  SPYYKVVC+        + Q+ +Y+S+  SW  +     +   + +  GV  +G + W S +     +       +K+ +  +     +   I +YFGE  G + L+
Sbjct:  146 YFVCNPTTKEFKILSPPKPA-----YLSLSLAFDPLISPYYKVVCICKGNSSKQNFQIDVYSSETESWSLLPILFEMPLGMTYSNGVFLDGSVHWYSYAETSLYFHIDSQSVKKMPMPFMFSWEGMDWDI-MYFGESRGHMHLV 283

[Close]

BLAST of CV191383 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s04500.1 ()

HSP 1 Score: 50.447 bits (119), Expect = 5.875e-7
Identity = 42/146 (28.77%), Postives = 62/146 (42.47%), Query Frame = 1

Query:   31 YIICNLTTQKFIALPSVNSSNWCSQYDEPY------LIYDPTKSPYYKVVCVSSSYIHNASQLAIYASQCASWKYVSL----ESFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNLSKSITIYFGECGGRL 438
            + ICN TT  F  +     S+   ++DE +      L +DP KS  YKVVC     +    Q+ +Y+S+  SW +  +       +K    V  N  I W SL      +   DV +E + +  +PP   L      YFG   G L
Sbjct:  205 FFICNPTTNHFKRI-----SHPVHKFDEFHHPPVLCLAFDPLKSFNYKVVCF-YQVVSGGYQIDVYSSETGSWGFNQIPFVNPPSLKIHEWVFCNDAIHWCSLEENSQYF---DVSSESVNILPMPPRGKLD---ITYFGGSRGHL 338

[Close]

BLAST of CV191383 vs. P. persica 1.0 peptide
Match: ppa022656m ()

HSP 1 Score: 82.4185 bits (202), Expect = 1.018e-16
Identity = 57/167 (34.13%), Postives = 85/167 (50.90%), Query Frame = 1

Query:    4 MLCCYGD-----RSYIICNLTTQKFIALPSVNSSNW--CSQYDEPYLIYDPTKSPYYKVVCV----SSSYIHNASQLAIYASQCASWK-----YVSLESFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPD-PNLSKSITIYFGECGGRLLLIEL 453
            +LCC        RS+ +CN +T++F+ LP  N+     C+      L ++P KSP+Y+VVCV    SSS      Q+ IY+S+  +W+     +V+    + F+ GV+WNG I W+S       +   D+D E L     PP      K    YFGE GG L L+E+
Sbjct:  117 VLCCSYPKRGKRRSFYVCNPSTRQFLMLPPPNADGCDSCTTIFGVNLAFNPPKSPHYQVVCVQNCSSSSTASGNYQIEIYSSETGTWRLSGSPFVATSDMV-FENGVLWNGTIHWISPKGATLCF---DIDRELLRSMPSPPSHERWDKRRFRYFGESGGHLHLVEI 279

[Close]

BLAST of CV191383 vs. P. persica 1.0 peptide
Match: ppa025279m ()

HSP 1 Score: 65.855 bits (159), Expect = 9.860e-12
Identity = 52/151 (34.44%), Postives = 77/151 (50.99%), Query Frame = 1

Query:   25 RSYIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVV---CVSSSYIHNASQLAIYASQCASW---KYVSLESF-IKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNL-SKSITIYFGECGGRLLLIEL 453
            R Y + N TT KF A+ +   +   +      L +DP+KS +YKV+   C++ S I  + Q+ IY+S+  +W   +   L  F I F  GV +NG I W+S + R   Y   ++D E   +   PP  N+  K    YFGE  G L LIE+
Sbjct:  135 RCYFVLNPTTNKFSAITNSPYATKSTSILGDALAFDPSKSLHYKVLCIRCIAGSVI--SFQIEIYSSETRNWTLRESTFLRPFHIDFSHGVYFNGAINWISHTSRVLHY---NIDEESHGMVSRPPSYNVFRKREYRYFGESRGHLHLIEI 280

[Close]

BLAST of CV191383 vs. P. persica 1.0 peptide
Match: ppa026517m ()

HSP 1 Score: 50.8322 bits (120), Expect = 3.282e-7
Identity = 45/151 (29.80%), Postives = 68/151 (45.03%), Query Frame = 1

Query:   19 GDRSYIICNLTT--QKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSYIHNASQL---AIYASQCASWKYV--SLESFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNLSKSITI-YFGECGGRLLLI 447
            G  SY +CN T+   K I++   + +      D   L +DP KS +Y ++ V+      + QL     Y+S+  SW Y   +L   + F  GV  NG I W  +  R +  S  D +   +   R+P   +      I Y GE GGRL L+
Sbjct:  131 GFTSYYVCNPTSGQTKRISVLDHSDNRRVMSVD---LAFDPLKSAFYNLIFVTELSRSESQQLIKIGTYSSKTQSWTYGLHNLAYEVGFGHGVHCNGAIYWRHV--RNNSVSYFDFEANCIQNLRIPQMTSEPYRTNIGYLGESGGRLHLV 276

[Close]

BLAST of CV191383 vs. TrEMBL
Match: D7UBL3|D7UBL3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_103.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010911001 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.089e-14
Identity = 58/164 (35.37%), Postives = 79/164 (48.17%), Query Frame = 1

Query:    1 GMLCCYGDRS------YIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSYIH-NASQLAIYASQCASWKYVSLESFIKFDR----GVVWNGGIIWMSLSRREHVYSRLDVDTEKL-TVTRVPPDP-NLSKSITIYFGECGGRLLLIEL 453
            G+LCC   RS      Y ICNL T++F  LP   SS          L +DP+KSPYY V+CV S  +  +  Q+ IY+S    W+         FD     GV WNG + W+S S     +    +D  ++ T+   PP P    K    +FGE GG L +IE+
Sbjct:  129 GLLCCSTVRSLGTSRNYYICNLATRRFSVLPPPCSSGGRDTVFGINLAFDPSKSPYYSVICVRSCEVSISHYQIEIYSSGTGDWRLSGKPFRAPFDMVFYDGVFWNGAVHWISPSGASLYFG---IDEGRIDTMPPPPPGPGGWGKRRIRHFGESGGHLHIIEI 289

[Close]

BLAST of CV191383 vs. TrEMBL
Match: B9HV09|B9HV09_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTRDRAFT_822634 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.776e-13
Identity = 51/153 (33.33%), Postives = 75/153 (49.02%), Query Frame = 1

Query:   10 CCYGDRSYIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSYIHNASQLAIYASQCASWK----YVSLESFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDP-NLSKSITIYFGECGGRLLLIEL 453
            C   DR Y IC  TT+++  LP       C       + YDPT SP+YK++CV  S     + + +Y S   SW+    +      + F+RGV  N  + W+S   R  +  R D++ E++    +PP P   S+    YFGE GG L LIE+
Sbjct:  143 CHEDDRKYYICKPTTKQYHQLPKPG----CKIVFGINIAYDPTISPHYKIICVCDS-----NAIKMYDSAIGSWRVSGNHQVFSHVLLFNRGVFLNRALHWIS---RGALALRFDIEQERMLTMPMPPIPEGRSERRLGYFGESGGHLCLIEI 283

[Close]

BLAST of CV191383 vs. TrEMBL
Match: B9IN08|B9IN08_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_578965 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.687e-11
Identity = 52/150 (34.67%), Postives = 80/150 (53.33%), Query Frame = 1

Query:   31 YIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSYIHNASQLAIYASQCASWKYVSLE------SFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNLSKSITI-YFGECGGRLLLIELPT 459
            Y + N TT++F+ L   +     S   +  L++DP+KSPYYKV+C+   Y  +  ++ +Y+S+   WK +SL+      S +  + GV WNG I W  +SR  + +  L +D E L     PP P   ++    YFGE GG+L  I L T
Sbjct:  150 YYVFNPTTRQFVELTLPSGDGIRSNRIQ--LVFDPSKSPYYKVLCI--HYFKSLLEIHVYSSETKIWK-LSLKQENFDSSSVDLNNGVFWNGAIHW--ISRMGNGFCFL-LDKECLQAMPSPPLPESWETNNFRYFGESGGQLHFIGLLT 291

[Close]

BLAST of CV191383 vs. TrEMBL
Match: B9GYI8|B9GYI8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_555245 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.121e-10
Identity = 47/142 (33.10%), Postives = 73/142 (51.41%), Query Frame = 1

Query:   37 ICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSYIHNASQLAIYASQCASWKY-VSLESF----IKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNLSKSITIYFGECGGRLLLI 447
            I N TT++F  LP   +      +    L++DP +SP Y+VVC+   + ++  ++ +Y+S+   WK  V LE+F    + F  GV WNG + WMS      +   LD++  + T+ R P   N       YFGE GG+L  I
Sbjct:  154 IFNPTTRQFALLPLPPNDG--KYFTRIQLVFDPLESPRYRVVCI--QFFNSELKIYVYSSETKDWKLSVKLENFDLLSVNFTDGVSWNGAVHWMS-PMGNGLSFLLDMECLQ-TIPRPPLPENWQDKNFRYFGESGGQLHFI 289

[Close]

BLAST of CV191383 vs. TrEMBL
Match: D7TZD2|D7TZD2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017506001 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.081e-10
Identity = 60/166 (36.14%), Postives = 82/166 (49.40%), Query Frame = 1

Query:    1 GMLCC----YGD--RSYIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVS---SSYIHNASQLAIYASQCASWKYVSLESF-----IKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNLSKSITI-YFGECGGRLLLIEL 453
            G+ CC    Y D  R Y I N TT++F  LP +   +   +     L +DP+KS  YKVVCV    SSY H   Q+ I + +   W+ VS   F     + F  GV WNG I W+S  R   +Y   D++ E +    +PP P+ S    I  FGE  G L L+E+
Sbjct:  104 GLFCCSSVDYNDSERKYYIYNPTTKQFTTLPPLCGRS-VRRVLGVNLAFDPSKSHTYKVVCVQRCKSSYDH--CQIQISSLETGPWR-VSGVPFAAPISVDFPSGVYWNGAIHWIS-PREASLY--FDLNEELVREMPMPPVPDDSNERGIRCFGESCGHLHLVEI 262

[Close]

BLAST of CV191383 vs. TrEMBL
Match: B9SJS1|B9SJS1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0907380 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.081e-10
Identity = 54/152 (35.53%), Postives = 77/152 (50.66%), Query Frame = 1

Query:   25 RSYIICNLTTQKFIALPS-VNSSNWCSQYD--EPYLIYDPTKSPYYKVVCV-SSSYIHNASQLAIYASQCASWKYVSLESF----IKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKL-TVTRVPPDPNLSKSITIYFGECGGRLLLIEL 453
            R+Y I N TT++   LPS V  +N  S        L +DP KS  YKV+CV S++      Q+  Y S+ A+W+   L       + FD GV WNG I W+S +    +Y   D+D E + ++ ++P      K    YFGE  G L LIE+
Sbjct:  122 RNYYISNPTTKQMFTLPSLVGDANAASPTTLFGLNLAFDPLKSCNYKVICVRSTTNSIYQYQIETYQSEIAAWRLSGLPFVAPFDMVFDNGVFWNGAIHWISATGNA-IY--FDMDRECISSMPKLPFSYEWGKRRFRYFGESDGHLHLIEI 270

[Close]

BLAST of CV191383 vs. TrEMBL
Match: B9I663|B9I663_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571296 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.451e-9
Identity = 52/149 (34.90%), Postives = 73/149 (48.99%), Query Frame = 1

Query:   34 IICNLTTQKFIALPSV-----NSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSY-IHNASQLAIYASQCASWKYV--SLE--SFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNLSKSI--TIYFGECGGRLLL 444
            IICN TT++F  L        NS  + S Y    L +DP KS +YK++C+   Y +    Q+ +Y+S+  SW ++  SLE  +   F  GV  N  I W S    E      DV+TE L +  +PP  +        +YFGE  GRL L
Sbjct:  141 IICNPTTKQFKTLSFPVPKFGNSKTYSSFYG---LAFDPLKSHHYKIICLHVDYRVSKNPQIYLYSSRTNSWSFLQNSLEAPTLYGFVNGVFCNDAIHWCSY---EQTTLYFDVNTESLKIMPMPPIFSTVNRFREMMYFGESRGRLHL 283

[Close]

BLAST of CV191383 vs. TrEMBL
Match: Q6WEQ2|Q6WEQ2_ARALY (F box protein family OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908710 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.886e-9
Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 1

Query:   28 SYIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCV---SSSYIHNASQ-----LAIYASQCASWKYV-----SLESFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVP---------PDPNLSKSITIYFGECGGRLLLIEL 453
            +Y + N TT+++  LP +      S      L +DP+KSP+YKV C+   S++ + +AS      + +Y+S    W+ V     S  +FI+F   V WNG + W  LS R+ +    D+  E++ +  +P         PDP   +    +  E  G L  IE+
Sbjct:  151 NYYVYNPTTKQYTLLPQITGHIALS------LAFDPSKSPHYKVFCLRGRSNNSVSSASDSELYHIEVYSSNEGLWRRVDPALTSPSTFIEFSYSVFWNGAVHWYGLSSRDCL--SFDISKEEIKILPLPDLDDEEALLPDPRTLR----FLDESRGNLYYIEV 302

[Close]

BLAST of CV191383 vs. TrEMBL
Match: Q6V5G6|Q6V5G6_CARAS (F-box protein OS=Cardaminopsis arenosa GN=Aa6_7610 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.688e-9
Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 1

Query:   28 SYIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCV---SSSYIHNASQ-----LAIYASQCASWKYV-----SLESFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVP---------PDPNLSKSITIYFGECGGRLLLIEL 453
            +Y + N TT+++  LP +      S      L +DP+KSP+YKV C+   S++ + +AS      + +Y+S    W+ V     S  +FI+F   V WNG + W  LS R+ +    D+  E++ +  +P         PDP   +    +  E  G L  IE+
Sbjct:  151 NYYVYNPTTKQYTLLPQITGHIALS------LAFDPSKSPHYKVFCLRGRSNNSVSSASDSELYHIEVYSSNEGLWRRVVPVLTSPSTFIEFTYSVFWNGAVHWYGLSSRDCL--SFDISKEEIKILPLPDLDDEEPLLPDPRTLR----FLDESRGNLYYIEV 302

[Close]

BLAST of CV191383 vs. TrEMBL
Match: Q6V5B5|Q6V5B5_CARAS (F-box protein OS=Cardaminopsis arenosa GN=Aa1_7610 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.004e-8
Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 1

Query:   28 SYIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCV---SSSYIHNASQ-----LAIYASQCASWKYV-----SLESFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVP---------PDPNLSKSITIYFGECGGRLLLIEL 453
            +Y + N TT+++  LP +      S      L +DP+KSP+YKV C+   S++ + +AS      + +Y+S    W+ V     S  +FI+F   V WNG + W  LS R+ +    D+  E++ +  +P         PDP   +    +  E  G L  IE+
Sbjct:  151 NYYVYNPTTKQYTLLPQITGHIALS------LAFDPSKSPHYKVFCLRGRSNNSVSSASDSELYHIEVYSSNEGLWRRVVPVLTSPSTFIEFTYSVFWNGAVHWYGLSSRDCL--SYDISKEEIKILPLPDLDDEEALLPDPRTLR----FLDESRGNLYYIEV 302

[Close]

BLAST of CV191383 vs. Vitis vinifera peptide
Match: GSVIVT01010911001 (assembled CDS)

HSP 1 Score: 82.0333 bits (201), Expect = 1.146e-16
Identity = 58/164 (35.37%), Postives = 79/164 (48.17%), Query Frame = 1

Query:    1 GMLCCYGDRS------YIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVSSSYIH-NASQLAIYASQCASWKYVSLESFIKFDR----GVVWNGGIIWMSLSRREHVYSRLDVDTEKL-TVTRVPPDP-NLSKSITIYFGECGGRLLLIEL 453
            G+LCC   RS      Y ICNL T++F  LP   SS          L +DP+KSPYY V+CV S  +  +  Q+ IY+S    W+         FD     GV WNG + W+S S     +    +D  ++ T+   PP P    K    +FGE GG L +IE+
Sbjct:  129 GLLCCSTVRSLGTSRNYYICNLATRRFSVLPPPCSSGGRDTVFGINLAFDPSKSPYYSVICVRSCEVSISHYQIEIYSSGTGDWRLSGKPFRAPFDMVFYDGVFWNGAVHWISPSGASLYFG---IDEGRIDTMPPPPPGPGGWGKRRIRHFGESGGHLHIIEI 289

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BLAST of CV191383 vs. Vitis vinifera peptide
Match: GSVIVT01017506001 (assembled CDS)

HSP 1 Score: 66.6254 bits (161), Expect = 4.981e-12
Identity = 60/166 (36.14%), Postives = 82/166 (49.40%), Query Frame = 1

Query:    1 GMLCC----YGD--RSYIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCVS---SSYIHNASQLAIYASQCASWKYVSLESF-----IKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVPPDPNLSKSITI-YFGECGGRLLLIEL 453
            G+ CC    Y D  R Y I N TT++F  LP +   +   +     L +DP+KS  YKVVCV    SSY H   Q+ I + +   W+ VS   F     + F  GV WNG I W+S  R   +Y   D++ E +    +PP P+ S    I  FGE  G L L+E+
Sbjct:  104 GLFCCSSVDYNDSERKYYIYNPTTKQFTTLPPLCGRS-VRRVLGVNLAFDPSKSHTYKVVCVQRCKSSYDH--CQIQISSLETGPWR-VSGVPFAAPISVDFPSGVYWNGAIHWIS-PREASLY--FDLNEELVREMPMPPVPDDSNERGIRCFGESCGHLHLVEI 262

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BLAST of CV191383 vs. TAIR peptide
Match: AT5G07610.1 (| Symbols: | F-box family protein | chr5:2406068-2407330 FORWARD LENGTH=420)

HSP 1 Score: 59.3066 bits (142), Expect = 1.120e-9
Identity = 45/164 (27.44%), Postives = 78/164 (47.56%), Query Frame = 1

Query:   28 SYIICNLTTQKFIALPSVNSSNWCSQYDEPYLIYDPTKSPYYKVVCV---SSSYIHNASQ-----LAIYASQCASWKYV-----SLESFIKFDRGVVWNGGIIWMSLSRREHVYSRLDVDTEKLTVTRVP---------PDPNLSKSITIYFGECGGRLLLIEL 453
            +Y + N TT+++  L  +      S      L +DP++SP+YKV C+   S++   +AS      + +Y+S    W+ V     S  +FI+F   V WNG + W   S R+ +    D++T+++ +  +P         PDP     I ++  E  G L  IE+
Sbjct:  149 NYYVYNPTTKQYTLLHQIAGHIALS------LAFDPSRSPHYKVFCLRGRSNNSFSSASDSELYHIEVYSSNEGLWRRVVPVPTSPSTFIEFSYSVFWNGAVNWYGFSSRDCL--SFDINTQEIKILPLPDHEHEDEPLPDPR----ILMFLDESQGNLYYIEV 300

The following BLAST results are available for this feature:

BLAST of CV191383 vs. DB:swissprot:display
BLAST of CV191383 vs. Populus trichocarpa peptide v2.0
BLAST of CV191383 vs. P. persica 1.0 peptide
BLAST of CV191383 vs. TrEMBL
BLAST of CV191383 vs. Vitis vinifera peptide
BLAST of CV191383 vs. TAIR peptide

BLAST of CV191383 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
FB253_ARATH	9.752e-9	27.44	F-box protein At5g07610 OS=Arabidopsis thaliana GN...	[more]

BLAST of CV191383 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 6


Match Name	E-value	Identity
POPTR_0010s26050.1	7.656e-15	33.33	[more]
POPTR_0018s13270.1	1.444e-13	33.99	[more]
POPTR_0003s21500.1	2.723e-12	33.10	[more]
POPTR_0013s06420.1	3.011e-11	34.90	[more]
POPTR_0013s06160.1	4.499e-7	25.69	[more]
POPTR_0005s04500.1	5.875e-7	28.77	[more]

BLAST of CV191383 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 3


Match Name	E-value	Identity
ppa022656m	1.018e-16	34.13	[more]
ppa025279m	9.860e-12	34.44	[more]
ppa026517m	3.282e-7	29.80	[more]

BLAST of CV191383 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7UBL3\|D7UBL3_VITVI	2.089e-14	35.37	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HV09\|B9HV09_POPTR	8.776e-13	33.33	F-box family protein OS=Populus trichocarpa GN=POP...	[more]
B9IN08\|B9IN08_POPTR	3.687e-11	34.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GYI8\|B9GYI8_POPTR	3.121e-10	33.10	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TZD2\|D7TZD2_VITVI	9.081e-10	36.14	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SJS1\|B9SJS1_RICCO	9.081e-10	35.53	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9I663\|B9I663_POPTR	3.451e-9	34.90	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q6WEQ2\|Q6WEQ2_ARALY	5.886e-9	28.66	F box protein family OS=Arabidopsis lyrata subsp. ...	[more]
Q6V5G6\|Q6V5G6_CARAS	7.688e-9	28.66	F-box protein OS=Cardaminopsis arenosa GN=Aa6_7610...	[more]
Q6V5B5\|Q6V5B5_CARAS	1.004e-8	28.66	F-box protein OS=Cardaminopsis arenosa GN=Aa1_7610...	[more]

BLAST of CV191383 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01010911001	1.146e-16	35.37	assembled CDS	[more]
GSVIVT01017506001	4.981e-12	36.14	assembled CDS	[more]

BLAST of CV191383 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G07610.1	1.120e-9	27.44	\| Symbols: \| F-box family protein \| chr5:2406068-...	[more]

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV191383 ID=CV191383; Name=CV191383; organism=Vaccinium corymbosum; type=EST; length=470bp
GGAATGTTGTGTTGCTATGGGGATCGGAGTTATATTATTTGTAATCTGAC
CACCCAAAAGTTCATAGCACTTCCCAGTGTCAATTCATCTAATTGGTGTT
CTCAATATGATGAACCTTACTTGATTTACGATCCTACAAAATCACCTTAT
TACAAGGTTGTGTGTGTTAGTTCTTCTTATATCCATAATGCTTCCCAATT
GGCTATATACGCTTCCCAATGTGCGTCTTGGAAGTACGTGAGTCTTGAAT
CATTTATCAAGTTCGACCGTGGTGTCGTTTGGAATGGAGGAATTATTTGG
ATGAGTTTGTCGAGGCGCGAGCACGTCTACTCTCGACTGGATGTGGATAC
AGAGAAACTCACAGTAACTCGTGTGCCTCCAGACCCTAATCTCTCGAAAA
GTATTACTATCTATTTTGGAGAATGTGGTGGTCGTTTGCTTCTTATTGAA
CTTCCTACAATAGATGCTAT