DW043563
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043563 vs. P. persica 1.0 peptide
Match: ppa011739m () HSP 1 Score: 48.521 bits (114), Expect = 7.921e-7 Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = -1 Query: 84 INGKLARTGLG-----RXSPGNNTRP*VTLSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 311 ING+LA G S G + +S G + L TS +LSVAS+IPLF GV VES S ++D +W GR AM+ Sbjct: 103 INGRLAMVGFVSALAVELSKGQDVF--AQISDGGVSLFLATSILLSVASVIPLFKGVSVESKSDGIMTSDAELWNGRLAML 181
BLAST of DW043563 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.262e-8 Identity = 40/81 (49.38%), Postives = 49/81 (60.49%), Query Frame = -1 Query: 84 INGKLARTGLG-----RXSPGNNTRP*VTLSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 311 ING+LA G S G + ++ G P +LT+GVLSVASLIPLF GV VES S F+S+D MW GRFAM+ Sbjct: 98 INGRLAMIGFVAAIAVELSKGEDVF--AQIANGGIPWFVLTTGVLSVASLIPLFSGVTVESKSRPFWSSDAEMWNGRFAML 176
BLAST of DW043563 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 3.858e-8 Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = -1 Query: 84 INGKLARTGLG-----RXSPGNNTRP*VTLSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 311 ING+LA G S G + +S G P LLT+GVLSVASLIPL GV VES S F+S+D MW GRFAM+ Sbjct: 86 INGRLAMVGFVAAIAVELSKGEDVF--AQISNGGIPWFLLTTGVLSVASLIPLSNGVSVESKSKPFWSSDAEMWNGRFAML 164
BLAST of DW043563 vs. TrEMBL
Match: B2BJD3|B2BJD3_RHOCT (Early light-induced protein 4 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 9.503e-7 Identity = 40/81 (49.38%), Postives = 47/81 (58.02%), Query Frame = -1 Query: 84 INGKLARTGLG-----RXSPGNNTRP*VTLSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 311 ING+LA G S G + +S G P LLT+GVLSVASLIPL GV VES S F+S+D M GRFAM+ Sbjct: 69 INGRLAMVGFVAAIAVELSKGEDVF--AQISNGGIPWFLLTTGVLSVASLIPLSSGVSVESRSKPFWSSDAEMLNGRFAML 147
BLAST of DW043563 vs. Vitis vinifera peptide
Match: GSVIVT01018044001 (assembled CDS) HSP 1 Score: 51.2174 bits (121), Expect = 1.037e-7 Identity = 29/52 (55.77%), Postives = 35/52 (67.31%), Query Frame = -1 Query: 84 LSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 239 +S G P L T+ VLS+ASLIPLF GV VES S ++D MW GRFAM+ Sbjct: 117 ISNGGIPWFLGTAVVLSLASLIPLFKGVSVESKSKGLMTSDAEMWNGRFAML 168
BLAST of DW043563 vs. TAIR peptide
Match: AT3G22840.1 (| Symbols: ELIP1, ELIP | Chlorophyll A-B binding family protein | chr3:8084628-8085445 REVERSE LENGTH=195) HSP 1 Score: 50.0618 bits (118), Expect = 3.426e-7 Identity = 32/81 (39.51%), Postives = 44/81 (54.32%), Query Frame = -1 Query: 84 INGKLARTGLG-----RXSPGNNTRP*VTLSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 311 ING+LA G S G N +S G L T+ +L++ASL+PLF G+ VES S ++D +W GRFAM+ Sbjct: 100 INGRLAMVGFVAALAVELSKGENVL--AQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAML 178 The following BLAST results are available for this feature:
BLAST of DW043563 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of DW043563 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 3
BLAST of DW043563 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of DW043563 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043563 ID=DW043563; Name=DW043563; organism=Vaccinium corymbosum; type=EST; length=332bpback to top |