DW043563

EST Overview
NameDW043563
Unique NameDW043563
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length332
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of DW043563 vs. P. persica 1.0 peptide
Match: ppa011739m ()

HSP 1 Score: 48.521 bits (114), Expect = 7.921e-7
Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = -1
Query:   84 INGKLARTGLG-----RXSPGNNTRP*VTLSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 311
            ING+LA  G         S G +      +S  G  + L TS +LSVAS+IPLF GV VES S    ++D  +W GR AM+
Sbjct:  103 INGRLAMVGFVSALAVELSKGQDVF--AQISDGGVSLFLATSILLSVASVIPLFKGVSVESKSDGIMTSDAELWNGRLAML 181          
BLAST of DW043563 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.262e-8
Identity = 40/81 (49.38%), Postives = 49/81 (60.49%), Query Frame = -1
Query:   84 INGKLARTGLG-----RXSPGNNTRP*VTLSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 311
            ING+LA  G         S G +      ++  G P  +LT+GVLSVASLIPLF GV VES S  F+S+D  MW GRFAM+
Sbjct:   98 INGRLAMIGFVAAIAVELSKGEDVF--AQIANGGIPWFVLTTGVLSVASLIPLFSGVTVESKSRPFWSSDAEMWNGRFAML 176          
BLAST of DW043563 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.858e-8
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = -1
Query:   84 INGKLARTGLG-----RXSPGNNTRP*VTLSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 311
            ING+LA  G         S G +      +S  G P  LLT+GVLSVASLIPL  GV VES S  F+S+D  MW GRFAM+
Sbjct:   86 INGRLAMVGFVAAIAVELSKGEDVF--AQISNGGIPWFLLTTGVLSVASLIPLSNGVSVESKSKPFWSSDAEMWNGRFAML 164          
BLAST of DW043563 vs. TrEMBL
Match: B2BJD3|B2BJD3_RHOCT (Early light-induced protein 4 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.503e-7
Identity = 40/81 (49.38%), Postives = 47/81 (58.02%), Query Frame = -1
Query:   84 INGKLARTGLG-----RXSPGNNTRP*VTLSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 311
            ING+LA  G         S G +      +S  G P  LLT+GVLSVASLIPL  GV VES S  F+S+D  M  GRFAM+
Sbjct:   69 INGRLAMVGFVAAIAVELSKGEDVF--AQISNGGIPWFLLTTGVLSVASLIPLSSGVSVESRSKPFWSSDAEMLNGRFAML 147          
BLAST of DW043563 vs. Vitis vinifera peptide
Match: GSVIVT01018044001 (assembled CDS)

HSP 1 Score: 51.2174 bits (121), Expect = 1.037e-7
Identity = 29/52 (55.77%), Postives = 35/52 (67.31%), Query Frame = -1
Query:   84 LSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 239
            +S  G P  L T+ VLS+ASLIPLF GV VES S    ++D  MW GRFAM+
Sbjct:  117 ISNGGIPWFLGTAVVLSLASLIPLFKGVSVESKSKGLMTSDAEMWNGRFAML 168          
BLAST of DW043563 vs. TAIR peptide
Match: AT3G22840.1 (| Symbols: ELIP1, ELIP | Chlorophyll A-B binding family protein | chr3:8084628-8085445 REVERSE LENGTH=195)

HSP 1 Score: 50.0618 bits (118), Expect = 3.426e-7
Identity = 32/81 (39.51%), Postives = 44/81 (54.32%), Query Frame = -1
Query:   84 INGKLARTGLG-----RXSPGNNTRP*VTLSPTGDPMVLLTSGVLSVASLIPLFLGVCVESLSIEFFSADV*MWYGRFAMV 311
            ING+LA  G         S G N      +S  G    L T+ +L++ASL+PLF G+ VES S    ++D  +W GRFAM+
Sbjct:  100 INGRLAMVGFVAALAVELSKGENVL--AQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAML 178          
The following BLAST results are available for this feature:
BLAST of DW043563 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa011739m7.921e-741.98[more]
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BLAST of DW043563 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 3
Match NameE-valueIdentityDescription
B2BJD6|B2BJD6_RHOCT2.262e-849.38Early light-induced protein 7 OS=Rhododendron cata... [more]
B2BJD5|B2BJD5_RHOCT3.858e-850.62Early light-induced protein 6 OS=Rhododendron cata... [more]
B2BJD3|B2BJD3_RHOCT9.503e-749.38Early light-induced protein 4 OS=Rhododendron cata... [more]
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BLAST of DW043563 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010180440011.037e-755.77assembled CDS[more]
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BLAST of DW043563 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G22840.13.426e-739.51| Symbols: ELIP1, ELIP | Chlorophyll A-B binding f... [more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043563 ID=DW043563; Name=DW043563; organism=Vaccinium corymbosum; type=EST; length=332bp
TAAGTCACGAAATTACATACAAAGTGCACCTACACAAGGGCTCCACCTAA
AGCAAACTAGGTGAAGGCCAGTGCAAATAAACCCACCATAGCAAATCTCC
CATACCACATCTAAACATCAGCACTAAAGAACTCTATAGATAAAGACTCT
ACACACACTCCTAAGAATAGAGGAATCAAAGATGCTACGGATAGCACACC
AGAAGTCAGCAAAACCATGGGATCCCCAGTTGGACTCAGAGTAACCTAAG
GCCTCGTATTATTTCCCGGGCTANTGCGGCCCAGCCCGGTTCTGGCGAGT
TTGCCATTGATTACTTACCGGTGCTGGNNTGA
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