CV090359
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV090359 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s06330.2 () HSP 1 Score: 60.077 bits (144), Expect = 5.808e-10 Identity = 35/93 (37.63%), Postives = 46/93 (49.46%), Query Frame = 2 Query: 137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSDVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415 +I A W+V+L GSI TC S ++ DP + LLR + K+ + VT R LG L L TL Y + TDGSPFR+E Sbjct: 69 FITATVWIVLLICSGSIATCAYIFIQLLKLSPEESLQDPLYHVLLRHENKGVEQKTKQSAVVTARIAFSILGLLMLGTLIYTLITDGSPFRKE 161
BLAST of CV090359 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s06330.1 () HSP 1 Score: 60.077 bits (144), Expect = 5.808e-10 Identity = 35/93 (37.63%), Postives = 46/93 (49.46%), Query Frame = 2 Query: 137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSDVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415 +I A W+V+L GSI TC S ++ DP + LLR + K+ + VT R LG L L TL Y + TDGSPFR+E Sbjct: 69 FITATVWIVLLICSGSIATCAYIFIQLLKLSPEESLQDPLYHVLLRHENKGVEQKTKQSAVVTARIAFSILGLLMLGTLIYTLITDGSPFRKE 161
BLAST of CV090359 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s22050.1 () HSP 1 Score: 57.3806 bits (137), Expect = 3.765e-9 Identity = 32/93 (34.41%), Postives = 47/93 (50.54%), Query Frame = 2 Query: 137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSDVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415 ++ A W+++L FGSI TC S ++ DP LLR + + K+ + ++ R LG L L TL Y + TDGSPFR+E Sbjct: 53 FLTATIWILLLICFGSITTCVYIFIQFLKLSPKESLQDPVYRVLLRHESKGVEQKMKQSAVMSARIAFSVLGFLMLGTLIYTLLTDGSPFRKE 145
BLAST of CV090359 vs. P. persica 1.0 peptide
Match: ppa010504m () HSP 1 Score: 60.4622 bits (145), Expect = 3.211e-10 Identity = 37/94 (39.36%), Postives = 45/94 (47.87%), Query Frame = 2 Query: 137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSDV-TTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415 WI A W+++L GSI TC S ++ DP Y LLR E K + S V R ALG L L TL Y + TDG+PFR E Sbjct: 69 WISATLWVILLACLGSITTCAYILLQFMKLSTQESQ-DPMYYVLLRHSNKYDMENKNKLSPVWIARVLFSALGLLMLGTLLYTLLTDGTPFRTE 161
BLAST of CV090359 vs. TrEMBL
Match: B9SM78|B9SM78_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0296840 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.736e-8 Identity = 35/91 (38.46%), Postives = 46/91 (50.55%), Query Frame = 2 Query: 155 WMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKR--FSDVTTRXFXXALGCLXLXTLFYXISTDGSPFRREXF 421 W+++L FGS+ TC S ++ DP Y LL+ T + K++ S V R LGCL TL Y I TDGSPFR+E F Sbjct: 76 WIILLICFGSVTTCAYIFIQFLKLSPQESLQDPMYYVLLQHDTKDGVGQKQKNHSSVVPARIGFSILGCLMAATLVYTILTDGSPFRKELF 166
BLAST of CV090359 vs. TrEMBL
Match: B9GT61|B9GT61_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_798608 PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.615e-8 Identity = 35/93 (37.63%), Postives = 46/93 (49.46%), Query Frame = 2 Query: 137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSDVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415 +I A W+V+L GSI TC S ++ DP + LLR + K+ + VT R LG L L TL Y + TDGSPFR+E Sbjct: 69 FITATVWIVLLICSGSIATCAYIFIQLLKLSPEESLQDPLYHVLLRHENKGVEQKTKQSAVVTARIAFSILGLLMLGTLIYTLITDGSPFRKE 161
BLAST of CV090359 vs. Vitis vinifera peptide
Match: GSVIVT01013697001 (assembled CDS) HSP 1 Score: 54.6842 bits (130), Expect = 1.525e-8 Identity = 35/93 (37.63%), Postives = 45/93 (48.39%), Query Frame = 2 Query: 140 IXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSD-VTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415 + A W ++L FGSI TC S ++ D + LLR + K+ FS VT R LG L L TL Y + TDGSPFR+E Sbjct: 51 VSAILWTILLVCFGSITTCAYIVLQFSKLSS-ESVQDAIYHVLLRNQSKNGTVQKRTFSPIVTARISFSLLGLLMLGTLIYTLLTDGSPFRKE 142
BLAST of CV090359 vs. TAIR peptide
Match: AT1G22750.4 (| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 186 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). | chr1:8050911-8052714 FORWARD LENGTH=257) HSP 1 Score: 53.5286 bits (127), Expect = 4.831e-8 Identity = 32/94 (34.04%), Postives = 42/94 (44.68%), Query Frame = 2 Query: 137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFS-DVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415 W + W ++L FGS+ TC + +A DP Y LLR + + + S VT R ALGC+ L L Y T GSPF E Sbjct: 72 WSGSILWTILLIIFGSLTTCVYLFLQLLKLTNQEASEDPMYYLLLRDSIKDGVGLRDKNSLVVTARFVFGALGCVMLGALVYTCFTYGSPFHME 165
BLAST of CV090359 vs. TAIR peptide
Match: AT1G22750.3 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:8050911-8052618 FORWARD LENGTH=241) HSP 1 Score: 53.5286 bits (127), Expect = 4.831e-8 Identity = 32/94 (34.04%), Postives = 42/94 (44.68%), Query Frame = 2 Query: 137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFS-DVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415 W + W ++L FGS+ TC + +A DP Y LLR + + + S VT R ALGC+ L L Y T GSPF E Sbjct: 72 WSGSILWTILLIIFGSLTTCVYLFLQLLKLTNQEASEDPMYYLLLRDSIKDGVGLRDKNSLVVTARFVFGALGCVMLGALVYTCFTYGSPFHME 165
BLAST of CV090359 vs. TAIR peptide
Match: AT1G22750.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 185 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). | chr1:8050911-8052631 FORWARD LENGTH=247) HSP 1 Score: 53.5286 bits (127), Expect = 4.831e-8 Identity = 32/94 (34.04%), Postives = 42/94 (44.68%), Query Frame = 2 Query: 137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFS-DVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415 W + W ++L FGS+ TC + +A DP Y LLR + + + S VT R ALGC+ L L Y T GSPF E Sbjct: 72 WSGSILWTILLIIFGSLTTCVYLFLQLLKLTNQEASEDPMYYLLLRDSIKDGVGLRDKNSLVVTARFVFGALGCVMLGALVYTCFTYGSPFHME 165
BLAST of CV090359 vs. TAIR peptide
Match: AT1G22750.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 185 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). | chr1:8050911-8052618 FORWARD LENGTH=244) HSP 1 Score: 53.5286 bits (127), Expect = 4.831e-8 Identity = 32/94 (34.04%), Postives = 42/94 (44.68%), Query Frame = 2 Query: 137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFS-DVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415 W + W ++L FGS+ TC + +A DP Y LLR + + + S VT R ALGC+ L L Y T GSPF E Sbjct: 72 WSGSILWTILLIIFGSLTTCVYLFLQLLKLTNQEASEDPMYYLLLRDSIKDGVGLRDKNSLVVTARFVFGALGCVMLGALVYTCFTYGSPFHME 165 The following BLAST results are available for this feature:
BLAST of CV090359 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 3
BLAST of CV090359 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CV090359 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 2
BLAST of CV090359 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of CV090359 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV090359 ID=CV090359; Name=CV090359; organism=Vaccinium corymbosum; type=EST; length=421bpback to top |