CV090359

EST Overview
NameCV090359
Unique NameCV090359
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length421
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV090359 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s06330.2 ()

HSP 1 Score: 60.077 bits (144), Expect = 5.808e-10
Identity = 35/93 (37.63%), Postives = 46/93 (49.46%), Query Frame = 2
Query:  137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSDVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415
            +I A  W+V+L   GSI TC          S  ++  DP  + LLR       +  K+ + VT R     LG L L TL Y + TDGSPFR+E
Sbjct:   69 FITATVWIVLLICSGSIATCAYIFIQLLKLSPEESLQDPLYHVLLRHENKGVEQKTKQSAVVTARIAFSILGLLMLGTLIYTLITDGSPFRKE 161          
BLAST of CV090359 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s06330.1 ()

HSP 1 Score: 60.077 bits (144), Expect = 5.808e-10
Identity = 35/93 (37.63%), Postives = 46/93 (49.46%), Query Frame = 2
Query:  137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSDVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415
            +I A  W+V+L   GSI TC          S  ++  DP  + LLR       +  K+ + VT R     LG L L TL Y + TDGSPFR+E
Sbjct:   69 FITATVWIVLLICSGSIATCAYIFIQLLKLSPEESLQDPLYHVLLRHENKGVEQKTKQSAVVTARIAFSILGLLMLGTLIYTLITDGSPFRKE 161          
BLAST of CV090359 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s22050.1 ()

HSP 1 Score: 57.3806 bits (137), Expect = 3.765e-9
Identity = 32/93 (34.41%), Postives = 47/93 (50.54%), Query Frame = 2
Query:  137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSDVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415
            ++ A  W+++L  FGSI TC          S  ++  DP    LLR  +    +  K+ + ++ R     LG L L TL Y + TDGSPFR+E
Sbjct:   53 FLTATIWILLLICFGSITTCVYIFIQFLKLSPKESLQDPVYRVLLRHESKGVEQKMKQSAVMSARIAFSVLGFLMLGTLIYTLLTDGSPFRKE 145          
BLAST of CV090359 vs. P. persica 1.0 peptide
Match: ppa010504m ()

HSP 1 Score: 60.4622 bits (145), Expect = 3.211e-10
Identity = 37/94 (39.36%), Postives = 45/94 (47.87%), Query Frame = 2
Query:  137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSDV-TTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415
            WI A  W+++L   GSI TC          S  ++  DP  Y LLR       E K + S V   R    ALG L L TL Y + TDG+PFR E
Sbjct:   69 WISATLWVILLACLGSITTCAYILLQFMKLSTQESQ-DPMYYVLLRHSNKYDMENKNKLSPVWIARVLFSALGLLMLGTLLYTLLTDGTPFRTE 161          
BLAST of CV090359 vs. TrEMBL
Match: B9SM78|B9SM78_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0296840 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.736e-8
Identity = 35/91 (38.46%), Postives = 46/91 (50.55%), Query Frame = 2
Query:  155 WMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKR--FSDVTTRXFXXALGCLXLXTLFYXISTDGSPFRREXF 421
            W+++L  FGS+ TC          S  ++  DP  Y LL+  T +    K++   S V  R     LGCL   TL Y I TDGSPFR+E F
Sbjct:   76 WIILLICFGSVTTCAYIFIQFLKLSPQESLQDPMYYVLLQHDTKDGVGQKQKNHSSVVPARIGFSILGCLMAATLVYTILTDGSPFRKELF 166          
BLAST of CV090359 vs. TrEMBL
Match: B9GT61|B9GT61_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_798608 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.615e-8
Identity = 35/93 (37.63%), Postives = 46/93 (49.46%), Query Frame = 2
Query:  137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSDVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415
            +I A  W+V+L   GSI TC          S  ++  DP  + LLR       +  K+ + VT R     LG L L TL Y + TDGSPFR+E
Sbjct:   69 FITATVWIVLLICSGSIATCAYIFIQLLKLSPEESLQDPLYHVLLRHENKGVEQKTKQSAVVTARIAFSILGLLMLGTLIYTLITDGSPFRKE 161          
BLAST of CV090359 vs. Vitis vinifera peptide
Match: GSVIVT01013697001 (assembled CDS)

HSP 1 Score: 54.6842 bits (130), Expect = 1.525e-8
Identity = 35/93 (37.63%), Postives = 45/93 (48.39%), Query Frame = 2
Query:  140 IXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFSD-VTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415
            + A  W ++L  FGSI TC          S  ++  D   + LLR  +      K+ FS  VT R     LG L L TL Y + TDGSPFR+E
Sbjct:   51 VSAILWTILLVCFGSITTCAYIVLQFSKLSS-ESVQDAIYHVLLRNQSKNGTVQKRTFSPIVTARISFSLLGLLMLGTLIYTLLTDGSPFRKE 142          
BLAST of CV090359 vs. TAIR peptide
Match: AT1G22750.4 (| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 186 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). | chr1:8050911-8052714 FORWARD LENGTH=257)

HSP 1 Score: 53.5286 bits (127), Expect = 4.831e-8
Identity = 32/94 (34.04%), Postives = 42/94 (44.68%), Query Frame = 2
Query:  137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFS-DVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415
            W  +  W ++L  FGS+ TC          +  +A  DP  Y LLR    +    + + S  VT R    ALGC+ L  L Y   T GSPF  E
Sbjct:   72 WSGSILWTILLIIFGSLTTCVYLFLQLLKLTNQEASEDPMYYLLLRDSIKDGVGLRDKNSLVVTARFVFGALGCVMLGALVYTCFTYGSPFHME 165          
BLAST of CV090359 vs. TAIR peptide
Match: AT1G22750.3 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:8050911-8052618 FORWARD LENGTH=241)

HSP 1 Score: 53.5286 bits (127), Expect = 4.831e-8
Identity = 32/94 (34.04%), Postives = 42/94 (44.68%), Query Frame = 2
Query:  137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFS-DVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415
            W  +  W ++L  FGS+ TC          +  +A  DP  Y LLR    +    + + S  VT R    ALGC+ L  L Y   T GSPF  E
Sbjct:   72 WSGSILWTILLIIFGSLTTCVYLFLQLLKLTNQEASEDPMYYLLLRDSIKDGVGLRDKNSLVVTARFVFGALGCVMLGALVYTCFTYGSPFHME 165          
BLAST of CV090359 vs. TAIR peptide
Match: AT1G22750.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 185 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). | chr1:8050911-8052631 FORWARD LENGTH=247)

HSP 1 Score: 53.5286 bits (127), Expect = 4.831e-8
Identity = 32/94 (34.04%), Postives = 42/94 (44.68%), Query Frame = 2
Query:  137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFS-DVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415
            W  +  W ++L  FGS+ TC          +  +A  DP  Y LLR    +    + + S  VT R    ALGC+ L  L Y   T GSPF  E
Sbjct:   72 WSGSILWTILLIIFGSLTTCVYLFLQLLKLTNQEASEDPMYYLLLRDSIKDGVGLRDKNSLVVTARFVFGALGCVMLGALVYTCFTYGSPFHME 165          
BLAST of CV090359 vs. TAIR peptide
Match: AT1G22750.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 185 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). | chr1:8050911-8052618 FORWARD LENGTH=244)

HSP 1 Score: 53.5286 bits (127), Expect = 4.831e-8
Identity = 32/94 (34.04%), Postives = 42/94 (44.68%), Query Frame = 2
Query:  137 WIXA*XWMVMLXXFGSIXTCXXXXXXXRXXSXXDAXXDPXXYXLLRXXTMEXXEXKKRFS-DVTTRXFXXALGCLXLXTLFYXISTDGSPFRRE 415
            W  +  W ++L  FGS+ TC          +  +A  DP  Y LLR    +    + + S  VT R    ALGC+ L  L Y   T GSPF  E
Sbjct:   72 WSGSILWTILLIIFGSLTTCVYLFLQLLKLTNQEASEDPMYYLLLRDSIKDGVGLRDKNSLVVTARFVFGALGCVMLGALVYTCFTYGSPFHME 165          
The following BLAST results are available for this feature:
BLAST of CV090359 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
POPTR_0002s06330.25.808e-1037.63[more]
POPTR_0002s06330.15.808e-1037.63[more]
POPTR_0005s22050.13.765e-934.41[more]
back to top
BLAST of CV090359 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa010504m3.211e-1039.36[more]
back to top
BLAST of CV090359 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 2
Match NameE-valueIdentityDescription
B9SM78|B9SM78_RICCO1.736e-838.46Putative uncharacterized protein OS=Ricinus commun... [more]
B9GT61|B9GT61_POPTR8.615e-837.63Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
back to top
BLAST of CV090359 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010136970011.525e-837.63assembled CDS[more]
back to top
BLAST of CV090359 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G22750.44.831e-834.04| Symbols: | unknown protein; CONTAINS InterPro D... [more]
AT1G22750.34.831e-834.04| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT1G22750.24.831e-834.04| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT1G22750.14.831e-834.04| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 26..31
score: NAcoord: 37..53
score: NAcoord: 67..78
score
NoneNo IPR availableSEGsegsegcoord: 15..24
score: NAcoord: 26..35
score: NAcoord: 62..73
score
NoneNo IPR availableSEGsegsegcoord: 2..12
score: NAcoord: 39..45
score
NoneNo IPR availableSEGsegsegcoord: 10..19
score: NAcoord: 39..45
score: NAcoord: 53..58
score
IPR009943Protein of unknown function DUF1475PFAMPF07343DUF1475coord: 1..87
score: 4.9

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090359 ID=CV090359; Name=CV090359; organism=Vaccinium corymbosum; type=EST; length=421bp
AGNATTCTACAAAGATTTCATCTCGCTCGGGGCCNANAAATGGTTATACN
CNTANGCACCTTTCNTCNGGGAAATGAGNTGGNACTTCNCTGNNTGACAC
GCTNCTTTCACTTGNGTTTGANANNAGGNATNANACTGGATCANNGCATG
ANTTTGGATGGTTATGCTANNATGNTTTGGAAGCATTNCAACATGTTNCT
NCANTGNTTNGCANNTCCGCANGNTGTCGANTTNNGATGCTTNGNAAGAT
CCAANACNTTATGNCCTATTGAGANATCNTACCATGGAGGNAGNGGAANA
CAAGAAGAGGTTTTCTGATGTGACTACNAGANTTTTCNTCNANGCTTTGG
GTTGTTTGANGCTGGNAACTTTATTTTACANTATATCCACAGATGGTTCT
CCATTCCGCAGAGAGNTCTTC
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated
IPR009943DUF1475