CV091172
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV091172 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s13730.1 () HSP 1 Score: 38.891 bits (89), Expect = 2.361e-7 Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = -1 Query: 72 IDPNAVAKAFEEHHYSTFDTNR 137 +DP+ VAKAF EH+YSTFD NR Sbjct: 1 MDPDQVAKAFVEHYYSTFDANR 22 HSP 2 Score: 31.5722 bits (70), Expect = 2.361e-7 Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = -2 Query: 5 GLGNSFQDGSKLSFEGQQFHGA 70 GL N +QDGS L+FEGQ+ G+ Sbjct: 24 GLANLYQDGSMLTFEGQKTQGS 45
BLAST of CV091172 vs. TAIR peptide
Match: AT1G27310.1 (| Symbols: NTF2A | nuclear transport factor 2A | chr1:9484615-9485790 REVERSE LENGTH=122) HSP 1 Score: 40.817 bits (94), Expect = 7.425e-7 Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = -1 Query: 72 IDPNAVAKAFEEHHYSTFDTNR 137 +DP+AVAKAF EH+YSTFD NR Sbjct: 1 MDPDAVAKAFVEHYYSTFDANR 22 HSP 2 Score: 27.7202 bits (60), Expect = 7.425e-7 Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = -2 Query: 5 GLGNSFQDGSKLSFEGQQFHGA 70 GL + +Q+GS L+FEGQ+ G+ Sbjct: 24 GLVSLYQEGSMLTFEGQKIQGS 45
BLAST of CV091172 vs. TAIR peptide
Match: AT1G27970.2 (| Symbols: NTF2B | nuclear transport factor 2B | chr1:9746921-9748306 FORWARD LENGTH=134) HSP 1 Score: 42.3578 bits (98), Expect = 9.565e-7 Identity = 17/23 (73.91%), Postives = 22/23 (95.65%), Query Frame = -1 Query: 72 EIDPNAVAKAFEEHHYSTFDTNR 140 ++DP+AV+KAF EH+YSTFDTNR Sbjct: 3 QMDPDAVSKAFVEHYYSTFDTNR 25 HSP 2 Score: 25.7942 bits (55), Expect = 9.565e-7 Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = -2 Query: 8 GLGNSFQDGSKLSFEGQQFHG 70 GL +Q+ S L+FEGQ+ G Sbjct: 27 GLAGLYQEASMLTFEGQKIQG 47
BLAST of CV091172 vs. TAIR peptide
Match: AT1G27970.1 (| Symbols: NTF2B | nuclear transport factor 2B | chr1:9746921-9747787 FORWARD LENGTH=126) HSP 1 Score: 42.3578 bits (98), Expect = 9.598e-7 Identity = 17/23 (73.91%), Postives = 22/23 (95.65%), Query Frame = -1 Query: 72 EIDPNAVAKAFEEHHYSTFDTNR 140 ++DP+AV+KAF EH+YSTFDTNR Sbjct: 3 QMDPDAVSKAFVEHYYSTFDTNR 25 HSP 2 Score: 25.7942 bits (55), Expect = 9.598e-7 Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = -2 Query: 8 GLGNSFQDGSKLSFEGQQFHG 70 GL +Q+ S L+FEGQ+ G Sbjct: 27 GLAGLYQEASMLTFEGQKIQG 47 The following BLAST results are available for this feature:
BLAST of CV091172 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CV091172 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV091172 ID=CV091172; Name=CV091172; organism=Vaccinium corymbosum; type=EST; length=251bpback to top |