CV190208
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV190208 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s05140.1 () HSP 1 Score: 73.1738 bits (178), Expect = 9.639e-14 Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTV 191 RVF+ ++ +DE R VV++EQAA+W+FLWWSGTISVHVLVDQNR+D ++ Sbjct: 133 RVFKNIKEVLSRRVLLDEGHRQVVDVEQAAIWKFLWWSGTISVHVLVDQNRQDHSM 188
BLAST of CV190208 vs. P. persica 1.0 peptide
Match: ppa008383m () HSP 1 Score: 78.1814 bits (191), Expect = 2.175e-15 Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194 RVF+ ++ + VDE R VVELEQAALWRFLWWSGTI+VHVLVDQNR+D +++ Sbjct: 130 RVFKNIKEVISRKVLVDEGSRQVVELEQAALWRFLWWSGTIAVHVLVDQNREDHSMK 186
BLAST of CV190208 vs. TrEMBL
Match: B9SH98|B9SH98_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0528040 PE=4 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.140e-14 Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194 RVF+ ++ E +DE R VVELEQAA+W+FLWWSGTISVHVLVDQNRKD T++ Sbjct: 128 RVFKNIKEVISREVLLDEGHRQVVELEQAAIWKFLWWSGTISVHVLVDQNRKDLTMK 184
BLAST of CV190208 vs. TrEMBL
Match: D7TDH1|D7TDH1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_127.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013760001 PE=4 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.333e-13 Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVRIT 200 RVF+ ++ +DE R VVE+EQAALWRFLWWSGTISVHV+VDQNR+D +++ T Sbjct: 124 RVFKNIKEVISRRVLLDEGLRQVVEVEQAALWRFLWWSGTISVHVIVDQNREDHSMKFT 182
BLAST of CV190208 vs. TrEMBL
Match: D7KY31|D7KY31_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_894859 PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.788e-13 Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194 RVF+ ++ + VD+ R VVE+EQAALWRFLWWSGTISVHVLVDQNR D +++ Sbjct: 127 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQNRADHSMK 183
BLAST of CV190208 vs. TrEMBL
Match: Q9CAL6|Q9CAL6_ARATH (Putative uncharacterized protein At1g70480 OS=Arabidopsis thaliana GN=At1g70480/F24J13.5 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.579e-12 Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194 RVF+ ++ + VD+ R VVE+EQAALWRFLWWSGTISVHVLVDQ+R D +++ Sbjct: 127 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQDRADHSMK 183
BLAST of CV190208 vs. TrEMBL
Match: Q8LCZ0|Q8LCZ0_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.579e-12 Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194 RVF+ ++ + VD+ R VVE+EQAALWRFLWWSGTISVHVLVDQ+R D +++ Sbjct: 127 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQDRADHSMK 183
BLAST of CV190208 vs. TrEMBL
Match: Q38888|Q38888_ARATH (OBP32pep (Fragment) OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.579e-12 Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194 RVF+ ++ + VD+ R VVE+EQAALWRFLWWSGTISVHVLVDQ+R D +++ Sbjct: 100 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQDRADHSMK 156
BLAST of CV190208 vs. TrEMBL
Match: B9HU63|B9HU63_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_885130 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.802e-12 Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTV 191 RVF+ ++ +DE R VV++EQAA+W+FLWWSGTISVHVLVDQNR+D ++ Sbjct: 91 RVFKNIKEVLSRRVLLDEGHRQVVDVEQAAIWKFLWWSGTISVHVLVDQNRQDHSM 146
BLAST of CV190208 vs. TrEMBL
Match: C5X9W1|C5X9W1_SORBI (Putative uncharacterized protein Sb02g022180 OS=Sorghum bicolor GN=Sb02g022180 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.672e-11 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194 RVF+ ++ + +DE R +VE+EQAA+W+FLWWSG +SVHV VDQNRK+ TV+ Sbjct: 962 RVFKNIKEVISRKVLLDEGSRQIVEVEQAAIWKFLWWSGILSVHVFVDQNRKNHTVK 1018
BLAST of CV190208 vs. TrEMBL
Match: B7FNC8|B7FNC8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.672e-11 Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194 RVF+ ++ + VDE R VV+L+QAA+WRFLWWSGTIS++VLVDQNR D +++ Sbjct: 135 RVFKNIKEVISRKVLVDEGHRQVVDLQQAAIWRFLWWSGTISINVLVDQNRNDYSMK 191
BLAST of CV190208 vs. TrEMBL
Match: C7J753|C7J753_ORYSJ (Os09g0327550 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os09g0327550 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.118e-10 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 3 Query: 39 FRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194 F++ + +DE R +VE+EQAA+WRFLWWSG +SVHV VDQNR + TV+ Sbjct: 7 FQEVISRKVVLDEGQRQIVEVEQAAIWRFLWWSGVLSVHVFVDQNRTNHTVK 58
BLAST of CV190208 vs. Vitis vinifera peptide
Match: GSVIVT01013760001 (assembled CDS) HSP 1 Score: 78.5666 bits (192), Expect = 1.432e-15 Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVRIT 200 RVF+ ++ +DE R VVE+EQAALWRFLWWSGTISVHV+VDQNR+D +++ T Sbjct: 124 RVFKNIKEVISRRVLLDEGLRQVVEVEQAALWRFLWWSGTISVHVIVDQNREDHSMKFT 182
BLAST of CV190208 vs. TAIR peptide
Match: AT1G70480.2 (| Symbols: | Domain of unknown function (DUF220) | chr1:26562250-26563608 FORWARD LENGTH=338) HSP 1 Score: 75.0998 bits (183), Expect = 2.242e-14 Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194 RVF+ ++ + VD+ R VVE+EQAALWRFLWWSGTISVHVLVDQ+R D +++ Sbjct: 145 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQDRADHSMK 201
BLAST of CV190208 vs. TAIR peptide
Match: AT1G70480.1 (| Symbols: | Domain of unknown function (DUF220) | chr1:26562304-26563608 FORWARD LENGTH=320) HSP 1 Score: 75.0998 bits (183), Expect = 2.242e-14 Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194 RVF+ ++ + VD+ R VVE+EQAALWRFLWWSGTISVHVLVDQ+R D +++ Sbjct: 127 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQDRADHSMK 183
BLAST of CV190208 vs. TAIR peptide
Match: AT1G23560.1 (| Symbols: | Domain of unknown function (DUF220) | chr1:8352802-8354145 REVERSE LENGTH=332) HSP 1 Score: 56.225 bits (134), Expect = 1.078e-8 Identity = 22/55 (40.00%), Postives = 37/55 (67.27%), Query Frame = 3 Query: 24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRT 188 R F+ ++ + +DE + VE++QAA W+FLWW GT +H++V++NRK+ T Sbjct: 132 RYFKNIKENISRKVLIDEGPKQTVEVKQAAAWKFLWWDGTCPIHLIVEENRKNLT 186 The following BLAST results are available for this feature:
BLAST of CV190208 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CV190208 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CV190208 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 10
BLAST of CV190208 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of CV190208 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV190208 ID=CV190208; Name=CV190208; organism=Vaccinium corymbosum; type=EST; length=502bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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