CV190208

EST Overview
NameCV190208
Unique NameCV190208
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length502
Libraries
Library NameType
LIBEST_016374 Vco01cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV190208 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s05140.1 ()

HSP 1 Score: 73.1738 bits (178), Expect = 9.639e-14
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTV 191
            RVF+  ++       +DE  R VV++EQAA+W+FLWWSGTISVHVLVDQNR+D ++
Sbjct:  133 RVFKNIKEVLSRRVLLDEGHRQVVDVEQAAIWKFLWWSGTISVHVLVDQNRQDHSM 188          
BLAST of CV190208 vs. P. persica 1.0 peptide
Match: ppa008383m ()

HSP 1 Score: 78.1814 bits (191), Expect = 2.175e-15
Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194
            RVF+  ++    +  VDE  R VVELEQAALWRFLWWSGTI+VHVLVDQNR+D +++
Sbjct:  130 RVFKNIKEVISRKVLVDEGSRQVVELEQAALWRFLWWSGTIAVHVLVDQNREDHSMK 186          
BLAST of CV190208 vs. TrEMBL
Match: B9SH98|B9SH98_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0528040 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.140e-14
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194
            RVF+  ++    E  +DE  R VVELEQAA+W+FLWWSGTISVHVLVDQNRKD T++
Sbjct:  128 RVFKNIKEVISREVLLDEGHRQVVELEQAAIWKFLWWSGTISVHVLVDQNRKDLTMK 184          
BLAST of CV190208 vs. TrEMBL
Match: D7TDH1|D7TDH1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_127.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013760001 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.333e-13
Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVRIT 200
            RVF+  ++       +DE  R VVE+EQAALWRFLWWSGTISVHV+VDQNR+D +++ T
Sbjct:  124 RVFKNIKEVISRRVLLDEGLRQVVEVEQAALWRFLWWSGTISVHVIVDQNREDHSMKFT 182          
BLAST of CV190208 vs. TrEMBL
Match: D7KY31|D7KY31_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_894859 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.788e-13
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194
            RVF+  ++    +  VD+  R VVE+EQAALWRFLWWSGTISVHVLVDQNR D +++
Sbjct:  127 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQNRADHSMK 183          
BLAST of CV190208 vs. TrEMBL
Match: Q9CAL6|Q9CAL6_ARATH (Putative uncharacterized protein At1g70480 OS=Arabidopsis thaliana GN=At1g70480/F24J13.5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.579e-12
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194
            RVF+  ++    +  VD+  R VVE+EQAALWRFLWWSGTISVHVLVDQ+R D +++
Sbjct:  127 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQDRADHSMK 183          
BLAST of CV190208 vs. TrEMBL
Match: Q8LCZ0|Q8LCZ0_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.579e-12
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194
            RVF+  ++    +  VD+  R VVE+EQAALWRFLWWSGTISVHVLVDQ+R D +++
Sbjct:  127 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQDRADHSMK 183          
BLAST of CV190208 vs. TrEMBL
Match: Q38888|Q38888_ARATH (OBP32pep (Fragment) OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.579e-12
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194
            RVF+  ++    +  VD+  R VVE+EQAALWRFLWWSGTISVHVLVDQ+R D +++
Sbjct:  100 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQDRADHSMK 156          
BLAST of CV190208 vs. TrEMBL
Match: B9HU63|B9HU63_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_885130 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.802e-12
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTV 191
            RVF+  ++       +DE  R VV++EQAA+W+FLWWSGTISVHVLVDQNR+D ++
Sbjct:   91 RVFKNIKEVLSRRVLLDEGHRQVVDVEQAAIWKFLWWSGTISVHVLVDQNRQDHSM 146          
BLAST of CV190208 vs. TrEMBL
Match: C5X9W1|C5X9W1_SORBI (Putative uncharacterized protein Sb02g022180 OS=Sorghum bicolor GN=Sb02g022180 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.672e-11
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194
            RVF+  ++    +  +DE  R +VE+EQAA+W+FLWWSG +SVHV VDQNRK+ TV+
Sbjct:  962 RVFKNIKEVISRKVLLDEGSRQIVEVEQAAIWKFLWWSGILSVHVFVDQNRKNHTVK 1018          
BLAST of CV190208 vs. TrEMBL
Match: B7FNC8|B7FNC8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.672e-11
Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194
            RVF+  ++    +  VDE  R VV+L+QAA+WRFLWWSGTIS++VLVDQNR D +++
Sbjct:  135 RVFKNIKEVISRKVLVDEGHRQVVDLQQAAIWRFLWWSGTISINVLVDQNRNDYSMK 191          
BLAST of CV190208 vs. TrEMBL
Match: C7J753|C7J753_ORYSJ (Os09g0327550 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os09g0327550 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.118e-10
Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 3
Query:   39 FRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194
            F++    +  +DE  R +VE+EQAA+WRFLWWSG +SVHV VDQNR + TV+
Sbjct:    7 FQEVISRKVVLDEGQRQIVEVEQAAIWRFLWWSGVLSVHVFVDQNRTNHTVK 58          
BLAST of CV190208 vs. Vitis vinifera peptide
Match: GSVIVT01013760001 (assembled CDS)

HSP 1 Score: 78.5666 bits (192), Expect = 1.432e-15
Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVRIT 200
            RVF+  ++       +DE  R VVE+EQAALWRFLWWSGTISVHV+VDQNR+D +++ T
Sbjct:  124 RVFKNIKEVISRRVLLDEGLRQVVEVEQAALWRFLWWSGTISVHVIVDQNREDHSMKFT 182          
BLAST of CV190208 vs. TAIR peptide
Match: AT1G70480.2 (| Symbols: | Domain of unknown function (DUF220) | chr1:26562250-26563608 FORWARD LENGTH=338)

HSP 1 Score: 75.0998 bits (183), Expect = 2.242e-14
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194
            RVF+  ++    +  VD+  R VVE+EQAALWRFLWWSGTISVHVLVDQ+R D +++
Sbjct:  145 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQDRADHSMK 201          
BLAST of CV190208 vs. TAIR peptide
Match: AT1G70480.1 (| Symbols: | Domain of unknown function (DUF220) | chr1:26562304-26563608 FORWARD LENGTH=320)

HSP 1 Score: 75.0998 bits (183), Expect = 2.242e-14
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRTVR 194
            RVF+  ++    +  VD+  R VVE+EQAALWRFLWWSGTISVHVLVDQ+R D +++
Sbjct:  127 RVFKNIKEVMSRKVLVDDGLRQVVEVEQAALWRFLWWSGTISVHVLVDQDRADHSMK 183          
BLAST of CV190208 vs. TAIR peptide
Match: AT1G23560.1 (| Symbols: | Domain of unknown function (DUF220) | chr1:8352802-8354145 REVERSE LENGTH=332)

HSP 1 Score: 56.225 bits (134), Expect = 1.078e-8
Identity = 22/55 (40.00%), Postives = 37/55 (67.27%), Query Frame = 3
Query:   24 RVFRIFRKWCPEESCVDESFRPVVELEQAALWRFLWWSGTISVHVLVDQNRKDRT 188
            R F+  ++    +  +DE  +  VE++QAA W+FLWW GT  +H++V++NRK+ T
Sbjct:  132 RYFKNIKENISRKVLIDEGPKQTVEVKQAAAWKFLWWDGTCPIHLIVEENRKNLT 186          
The following BLAST results are available for this feature:
BLAST of CV190208 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0010s05140.19.639e-1457.14[more]
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BLAST of CV190208 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa008383m2.175e-1563.16[more]
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BLAST of CV190208 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
B9SH98|B9SH98_RICCO6.140e-1464.91Putative uncharacterized protein OS=Ricinus commun... [more]
D7TDH1|D7TDH1_VITVI2.333e-1359.32Whole genome shotgun sequence of line PN40024, sca... [more]
D7KY31|D7KY31_ARALY6.788e-1361.40Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9CAL6|Q9CAL6_ARATH2.579e-1259.65Putative uncharacterized protein At1g70480 OS=Arab... [more]
Q8LCZ0|Q8LCZ0_ARATH2.579e-1259.65Putative uncharacterized protein OS=Arabidopsis th... [more]
Q38888|Q38888_ARATH2.579e-1259.65OBP32pep (Fragment) OS=Arabidopsis thaliana PE=2 S... [more]
B9HU63|B9HU63_POPTR9.802e-1257.14Predicted protein (Fragment) OS=Populus trichocarp... [more]
C5X9W1|C5X9W1_SORBI1.672e-1154.39Putative uncharacterized protein Sb02g022180 OS=So... [more]
B7FNC8|B7FNC8_MEDTR1.672e-1156.14Putative uncharacterized protein OS=Medicago trunc... [more]
C7J753|C7J753_ORYSJ4.118e-1055.77Os09g0327550 protein (Fragment) OS=Oryza sativa su... [more]
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BLAST of CV190208 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010137600011.432e-1559.32assembled CDS[more]
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BLAST of CV190208 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G70480.22.242e-1459.65| Symbols: | Domain of unknown function (DUF220) ... [more]
AT1G70480.12.242e-1459.65| Symbols: | Domain of unknown function (DUF220) ... [more]
AT1G23560.11.078e-840.00| Symbols: | Domain of unknown function (DUF220) ... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 36..51
score
NoneNo IPR availableSEGsegsegcoord: 40..51
score
NoneNo IPR availableSEGsegsegcoord: 17..28
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV190208 ID=CV190208; Name=CV190208; organism=Vaccinium corymbosum; type=EST; length=502bp
CATTGTTACAGACCTGATAATAGAGAGTCTTCAGAATATTCAGGAAGTGG
TGTCCAGAAGAGTCTTGTGTTGATGAAAGTTTCAGGCCGGTGGTTGAACT
GGAACAAGCGGCTCTATGGAGGTTCCTTTGGTGGTCAGGGACCATCTCAG
TTCATGTTTTAGTAGATCAGAATAGAAAAGATCGCACAGTAAGGATTACT
TAATTCTTCGCAGTCTAATTTCAATCTTATAGTGTTGTTCACCATGCCTA
ACTTCTTTCTGGGCTGAATTTCATTTCCTTCTCAAACCAATAGAGGGAGT
ACCAAAGTTAGGGATATTAAGTGAAATTCACCGGTATTTAGTGAAATTGC
TAGAAGTGGAACTATTGTCTTCTATGTTGATACTATGGGTGTCAGTTGCG
TTATTGCGATCCAGATTTTATCGCTATTAGTGGTGCTCTTCTTGGCTCAG
CAGCTCAACAGCACAATCACTATAGAAGGCATCTTATTTACGTTAATAGC
TA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated