CV190910 | GDV

EST Overview


Name	CV190910
Unique Name	CV190910
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	577

Libraries


Library Name	Type
LIBEST_016374 Vco01	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV190910 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15930.1 ()

HSP 1 Score: 231.491 bits (589), Expect = 2.774e-61
Identity = 94/113 (83.19%), Postives = 102/113 (90.27%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKPSDSHE 341
            KYTDKWAER EGDGW+KWGDKWDENFD   HGVKQGE WW+GK+GERWNRTWGE HNGSGWVHKYGKSS GEHWDTH QQ+TWYER+PH+GF HCFENSVQLREV+KPS+  E
Sbjct:  464 KYTDKWAERCEGDGWAKWGDKWDENFDLNGHGVKQGEAWWEGKHGERWNRTWGERHNGSGWVHKYGKSSCGEHWDTHTQQDTWYERFPHYGFYHCFENSVQLREVQKPSEIDE 576

[Close]

BLAST of CV190910 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s27110.1 ()

HSP 1 Score: 113.235 bits (282), Expect = 1.101e-25
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREV 317
            K+TDKWAE   G   +KWGDKW+E F +   G + GETW     G RW+RTWGE H G+G VHKYGKS++ E WD  V +ET+YE  PH+G+     +S QL  +
Sbjct:  301 KWTDKWAETELG---TKWGDKWEEKFFA-GIGSRHGETWHVSPIGGRWSRTWGEEHFGNGKVHKYGKSTTSESWDIVVDEETYYEAEPHYGWADVVGDSSQLLSI 401

[Close]

BLAST of CV190910 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s01260.1 ()

HSP 1 Score: 110.923 bits (276), Expect = 5.465e-25
Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREV 317
            K+TDKWAE   G   +KWGDKW+E F +   G + GETW     G  W+RTWGE H G+G VHKYGK ++GE WD  V +ET+YE  PH+G+     +S QL  +
Sbjct:  302 KWTDKWAETELG---TKWGDKWEEKFFA-GIGSRHGETWHGSPSGGGWSRTWGEEHLGNGKVHKYGKGTTGESWDIVVDEETYYEAEPHYGWADVVGDSSQLLSI 402

[Close]

BLAST of CV190910 vs. P. persica 1.0 peptide
Match: ppa003443m ()

HSP 1 Score: 234.572 bits (597), Expect = 2.357e-62
Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKPSD 332
            KYTDKWAER EGDGW+KWGDKWDE+F+   HGVKQGETWW+GKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTH  Q+TWYER+PHFGF HCFENSVQLREV KPSD
Sbjct:  463 KYTDKWAERCEGDGWAKWGDKWDEHFNPNGHGVKQGETWWEGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHEPQDTWYERFPHFGFYHCFENSVQLREVPKPSD 572

[Close]

BLAST of CV190910 vs. P. persica 1.0 peptide
Match: ppa005695m ()

HSP 1 Score: 120.553 bits (301), Expect = 4.961e-28
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVR 320
            K+TDKWAE   G   +KWGDKW+E F +   G +QGETW     GERW+RTWGE H G+G VHKYGKS++GE WD  V +ET+YE  PH+G+     +S QL  ++
Sbjct:  315 KWTDKWAETELG---TKWGDKWEEKFFA-GIGSRQGETWHVSPSGERWSRTWGEEHFGNGKVHKYGKSTTGESWDIVVDEETYYEAEPHYGWADVVGDSSQLLSIK 416

[Close]

BLAST of CV190910 vs. TrEMBL
Match: Q2PES3|Q2PES3_TRIPR (Putative uncharacterized protein OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.443e-59
Identity = 95/113 (84.07%), Postives = 101/113 (89.38%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKPSDSHE 341
            KYTDKWAERS   GW KWGDKWDENFD  SHG+KQGETWW+GKYGERWNRTWGE HNGSGWVHKYGKSSSGEHWDTH  Q+TWYER+PHFGF HCFENSVQLREV+KPS+  E
Sbjct:  450 KYTDKWAERSSDGGWEKWGDKWDENFDPNSHGIKQGETWWEGKYGERWNRTWGEQHNGSGWVHKYGKSSSGEHWDTHEPQDTWYERFPHFGFFHCFENSVQLREVKKPSERQE 562

[Close]

BLAST of CV190910 vs. TrEMBL
Match: D7T763|D7T763_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018073001 PE=4 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.442e-59
Identity = 93/108 (86.11%), Postives = 101/108 (93.52%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKP 326
            KYTDKWAER EGD W+KWGDKWDENFD  SHGVKQGETWW+GK+GERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTH +Q+TWYER+PH+GF HCFENSVQLREV+ P
Sbjct:  303 KYTDKWAERCEGDAWTKWGDKWDENFDPNSHGVKQGETWWEGKHGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHEEQDTWYERFPHYGFYHCFENSVQLREVQTP 410

[Close]

BLAST of CV190910 vs. TrEMBL
Match: B9HKC2|B9HKC2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_419087 PE=4 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.442e-59
Identity = 93/110 (84.55%), Postives = 101/110 (91.82%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKPSD 332
            KYTDKWAER EGDGW+KWGDKWDENFD   HGVKQGE WW+GK+GERWNRTWGE HNGSGWVHKYGKSS GEHWDTH QQ+TWYER+PH+GF HCFENSVQLREV+KPS+
Sbjct:  426 KYTDKWAERCEGDGWAKWGDKWDENFDLNGHGVKQGEAWWEGKHGERWNRTWGERHNGSGWVHKYGKSSCGEHWDTHTQQDTWYERFPHYGFYHCFENSVQLREVQKPSE 535

[Close]

BLAST of CV190910 vs. TrEMBL
Match: B9RTI0|B9RTI0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0910730 PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.107e-59
Identity = 95/113 (84.07%), Postives = 102/113 (90.27%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKPSDSHE 341
            KYTDKWAER EGDGW+KWGDKWDE+FD   HGVKQGETWW GK+GERWNRTWGE HNGSGWVHKYGKSSSGEHWDTH +QETWYER+PH+GF HCFENS  LREV+ PSDSHE
Sbjct:  453 KYTDKWAERCEGDGWTKWGDKWDEHFDPNGHGVKQGETWWAGKHGERWNRTWGERHNGSGWVHKYGKSSSGEHWDTHEEQETWYERFPHYGFYHCFENSGILREVQIPSDSHE 565

[Close]

BLAST of CV190910 vs. TrEMBL
Match: D7LV85|D7LV85_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486012 PE=4 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.527e-58
Identity = 93/110 (84.55%), Postives = 101/110 (91.82%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKPSD 332
            KYTDKWAER  GDGW KWGDKWDENF+  + GVKQGETWW+GK+G+RWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHV QETWYER+PHFGF HCF+NSVQLR V+KPSD
Sbjct:  469 KYTDKWAERWVGDGWDKWGDKWDENFNPSAQGVKQGETWWEGKHGDRWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVPQETWYERFPHFGFFHCFDNSVQLRAVKKPSD 578

[Close]

BLAST of CV190910 vs. TrEMBL
Match: C5Y5C1|C5Y5C1_SORBI (Putative uncharacterized protein Sb05g022830 OS=Sorghum bicolor GN=Sb05g022830 PE=4 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.017e-58
Identity = 91/107 (85.05%), Postives = 98/107 (91.59%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRK 323
            KYTDKWAERSEGDGWSKWGDKWDE+FD   HG KQGETWW GKYG+RWNRTWGEGHNGSGWVHKYG+SSSGEHWDTHV Q+TWYER+PHFGF HCFENS QLR V++
Sbjct:  493 KYTDKWAERSEGDGWSKWGDKWDEHFDPNGHGTKQGETWWAGKYGDRWNRTWGEGHNGSGWVHKYGRSSSGEHWDTHVPQDTWYERFPHFGFYHCFENSAQLRSVKR 599

[Close]

BLAST of CV190910 vs. TrEMBL
Match: Q8L722|Q8L722_ARATH (Putative uncharacterized protein At3g55760 OS=Arabidopsis thaliana GN=At3g55760 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.286e-57
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKPSD 332
            KYTDKWAER  GDGW KWGDKWDENF+  + GVKQGETWW+GK+G+RWNR+WGEGHNGSGWVHKYGKSSSGEHWDTHV QETWYE++PHFGF HCF+NSVQLR V+KPSD
Sbjct:  467 KYTDKWAERWVGDGWDKWGDKWDENFNPSAQGVKQGETWWEGKHGDRWNRSWGEGHNGSGWVHKYGKSSSGEHWDTHVPQETWYEKFPHFGFFHCFDNSVQLRAVKKPSD 576

[Close]

BLAST of CV190910 vs. TrEMBL
Match: Q5EAH9|Q5EAH9_ARATH (At3g55760 OS=Arabidopsis thaliana GN=At3g55760 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.286e-57
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKPSD 332
            KYTDKWAER  GDGW KWGDKWDENF+  + GVKQGETWW+GK+G+RWNR+WGEGHNGSGWVHKYGKSSSGEHWDTHV QETWYE++PHFGF HCF+NSVQLR V+KPSD
Sbjct:  467 KYTDKWAERWVGDGWDKWGDKWDENFNPSAQGVKQGETWWEGKHGDRWNRSWGEGHNGSGWVHKYGKSSSGEHWDTHVPQETWYEKFPHFGFFHCFDNSVQLRAVKKPSD 576

[Close]

BLAST of CV190910 vs. TrEMBL
Match: Q2R1Z4|Q2R1Z4_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g37560 PE=4 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.688e-57
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRK 323
            KYTDKWAERSEGDGWSKWGDKWDE+FD   HGVKQGETWW GKYG+RWNRTWGE HN +GWVHKYG+SSSGEHWDTHV Q+TWYER+PHFGFEHCF NSVQLR V++
Sbjct:  501 KYTDKWAERSEGDGWSKWGDKWDEHFDPNGHGVKQGETWWAGKYGDRWNRTWGEHHNCTGWVHKYGRSSSGEHWDTHVPQDTWYERFPHFGFEHCFNNSVQLRSVKR 607

[Close]

BLAST of CV190910 vs. TrEMBL
Match: Q0IRY4|Q0IRY4_ORYSJ (Os11g0586300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os11g0586300 PE=4 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.688e-57
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRK 323
            KYTDKWAERSEGDGWSKWGDKWDE+FD   HGVKQGETWW GKYG+RWNRTWGE HN +GWVHKYG+SSSGEHWDTHV Q+TWYER+PHFGFEHCF NSVQLR V++
Sbjct:  420 KYTDKWAERSEGDGWSKWGDKWDEHFDPNGHGVKQGETWWAGKYGDRWNRTWGEHHNCTGWVHKYGRSSSGEHWDTHVPQDTWYERFPHFGFEHCFNNSVQLRSVKR 526

[Close]

BLAST of CV190910 vs. Vitis vinifera peptide
Match: GSVIVT01018073001 (assembled CDS)

HSP 1 Score: 230.72 bits (587), Expect = 2.916e-61
Identity = 93/108 (86.11%), Postives = 101/108 (93.52%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKP 326
            KYTDKWAER EGD W+KWGDKWDENFD  SHGVKQGETWW+GK+GERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTH +Q+TWYER+PH+GF HCFENSVQLREV+ P
Sbjct:  303 KYTDKWAERCEGDAWTKWGDKWDENFDPNSHGVKQGETWWEGKHGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHEEQDTWYERFPHYGFYHCFENSVQLREVQTP 410

[Close]

BLAST of CV190910 vs. Vitis vinifera peptide
Match: GSVIVT01008677001 (assembled CDS)

HSP 1 Score: 120.553 bits (301), Expect = 4.250e-28
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREV 317
            K+TDKWAE   G   +KWGDKW+E F +   G +QGETW     G+RW+RTWGE H G+G VHKYGKS++GE WD  V +ET+YE  PH+G+     NS QL  +
Sbjct:  213 KWTDKWAETELG---TKWGDKWEEKFFA-GIGSRQGETWHLSPSGDRWSRTWGEEHFGNGKVHKYGKSTTGESWDIVVDEETYYEAEPHYGWADVVGNSSQLLSI 313

[Close]

BLAST of CV190910 vs. TAIR peptide
Match: AT3G55760.3 (| Symbols: | unknown protein; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42430.2). | chr3:20700648-20702886 FORWARD LENGTH=578)

HSP 1 Score: 225.328 bits (573), Expect = 1.753e-59
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKPSD 332
            KYTDKWAER  GDGW KWGDKWDENF+  + GVKQGETWW+GK+G+RWNR+WGEGHNGSGWVHKYGKSSSGEHWDTHV QETWYE++PHFGF HCF+NSVQLR V+KPSD
Sbjct:  467 KYTDKWAERWVGDGWDKWGDKWDENFNPSAQGVKQGETWWEGKHGDRWNRSWGEGHNGSGWVHKYGKSSSGEHWDTHVPQETWYEKFPHFGFFHCFDNSVQLRAVKKPSD 576

[Close]

BLAST of CV190910 vs. TAIR peptide
Match: AT3G55760.2 (| Symbols: | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42430.2); Has 176 Blast hits to 125 proteins in 40 species: Archae - 0; Bacteria - 3; Metazoa - 19; Fungi - 9; Plants - 81; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). | chr3:20700648-20702886 FORWARD LENGTH=578)

HSP 1 Score: 225.328 bits (573), Expect = 1.753e-59
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKPSD 332
            KYTDKWAER  GDGW KWGDKWDENF+  + GVKQGETWW+GK+G+RWNR+WGEGHNGSGWVHKYGKSSSGEHWDTHV QETWYE++PHFGF HCF+NSVQLR V+KPSD
Sbjct:  467 KYTDKWAERWVGDGWDKWGDKWDENFNPSAQGVKQGETWWEGKHGDRWNRSWGEGHNGSGWVHKYGKSSSGEHWDTHVPQETWYEKFPHFGFFHCFDNSVQLRAVKKPSD 576

[Close]

BLAST of CV190910 vs. TAIR peptide
Match: AT3G55760.1 (| Symbols: | unknown protein; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42430.2); Has 176 Blast hits to 125 proteins in 40 species: Archae - 0; Bacteria - 3; Metazoa - 19; Fungi - 9; Plants - 81; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). | chr3:20700648-20702886 FORWARD LENGTH=578)

HSP 1 Score: 225.328 bits (573), Expect = 1.753e-59
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVRKPSD 332
            KYTDKWAER  GDGW KWGDKWDENF+  + GVKQGETWW+GK+G+RWNR+WGEGHNGSGWVHKYGKSSSGEHWDTHV QETWYE++PHFGF HCF+NSVQLR V+KPSD
Sbjct:  467 KYTDKWAERWVGDGWDKWGDKWDENFNPSAQGVKQGETWWEGKHGDRWNRSWGEGHNGSGWVHKYGKSSSGEHWDTHVPQETWYEKFPHFGFFHCFDNSVQLRAVKKPSD 576

[Close]

BLAST of CV190910 vs. TAIR peptide
Match: AT1G42430.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3). | chr1:15891512-15894322 FORWARD LENGTH=409)

HSP 1 Score: 118.627 bits (296), Expect = 2.311e-27
Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVR 320
            K+TDKWAE   G   +KWGDKW+E F S   G +QGETW      +RW+RTWGE H G+G VHKYGKS++GE WD  V +ET+YE  PH+G+     +S QL  ++
Sbjct:  278 KWTDKWAETELG---TKWGDKWEEKFFS-GIGSRQGETWHVSPNSDRWSRTWGEEHFGNGKVHKYGKSTTGESWDIVVDEETYYEAEPHYGWADVVGDSTQLLSIQ 379

[Close]

BLAST of CV190910 vs. TAIR peptide
Match: AT1G42430.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). | chr1:15891512-15894322 FORWARD LENGTH=426)

HSP 1 Score: 118.627 bits (296), Expect = 2.311e-27
Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 3

Query:    3 KYTDKWAERSEGDGWSKWGDKWDENFDSYSHGVKQGETWWQGKYGERWNRTWGEGHNGSGWVHKYGKSSSGEHWDTHVQQETWYERYPHFGFEHCFENSVQLREVR 320
            K+TDKWAE   G   +KWGDKW+E F S   G +QGETW      +RW+RTWGE H G+G VHKYGKS++GE WD  V +ET+YE  PH+G+     +S QL  ++
Sbjct:  295 KWTDKWAETELG---TKWGDKWEEKFFS-GIGSRQGETWHVSPNSDRWSRTWGEEHFGNGKVHKYGKSTTGESWDIVVDEETYYEAEPHYGWADVVGDSTQLLSIQ 396

The following BLAST results are available for this feature:

BLAST of CV190910 vs. Populus trichocarpa peptide v2.0
BLAST of CV190910 vs. P. persica 1.0 peptide
BLAST of CV190910 vs. TrEMBL
BLAST of CV190910 vs. Vitis vinifera peptide
BLAST of CV190910 vs. TAIR peptide

BLAST of CV190910 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0008s15930.1	2.774e-61	83.19	[more]
POPTR_0005s27110.1	1.101e-25	50.48	[more]
POPTR_0002s01260.1	5.465e-25	49.52	[more]

BLAST of CV190910 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa003443m	2.357e-62	87.27		[more]
ppa005695m	4.961e-28	52.83		[more]

BLAST of CV190910 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
Q2PES3\|Q2PES3_TRIPR	2.443e-59	84.07	Putative uncharacterized protein OS=Trifolium prat...	[more]
D7T763\|D7T763_VITVI	5.442e-59	86.11	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HKC2\|B9HKC2_POPTR	5.442e-59	84.55	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9RTI0\|B9RTI0_RICCO	7.107e-59	84.07	Putative uncharacterized protein OS=Ricinus commun...	[more]
D7LV85\|D7LV85_ARALY	3.527e-58	84.55	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
C5Y5C1\|C5Y5C1_SORBI	6.017e-58	85.05	Putative uncharacterized protein Sb05g022830 OS=So...	[more]
Q8L722\|Q8L722_ARATH	2.286e-57	82.73	Putative uncharacterized protein At3g55760 OS=Arab...	[more]
Q5EAH9\|Q5EAH9_ARATH	2.286e-57	82.73	At3g55760 OS=Arabidopsis thaliana GN=At3g55760 PE=...	[more]
Q2R1Z4\|Q2R1Z4_ORYSJ	8.688e-57	84.11	Expressed protein OS=Oryza sativa subsp. japonica ...	[more]
Q0IRY4\|Q0IRY4_ORYSJ	8.688e-57	84.11	Os11g0586300 protein (Fragment) OS=Oryza sativa su...	[more]

BLAST of CV190910 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01018073001	2.916e-61	86.11	assembled CDS	[more]
GSVIVT01008677001	4.250e-28	53.33	assembled CDS	[more]

BLAST of CV190910 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G55760.3	1.753e-59	82.73	\| Symbols: \| unknown protein; EXPRESSED IN: 16 pl...	[more]
AT3G55760.2	1.753e-59	82.73	\| Symbols: \| unknown protein; LOCATED IN: chlorop...	[more]
AT3G55760.1	1.753e-59	82.73	\| Symbols: \| unknown protein; LOCATED IN: chlorop...	[more]
AT1G42430.2	2.311e-27	51.89	\| Symbols: \| unknown protein; FUNCTIONS IN: molec...	[more]
AT1G42430.1	2.311e-27	51.89	\| Symbols: \| unknown protein; BEST Arabidopsis th...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 82..89 score
None	No IPR available	SEG	seg	seg	coord: 27..39 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV190910 ID=CV190910; Name=CV190910; organism=Vaccinium corymbosum; type=EST; length=577bp
GGAAATACACAGACAAATGGGCTGAACGCTCCGAGGGTGACGGCTGGTCA
AAATGGGGTGACAAATGGGACGAGAACTTCGATTCGTACAGTCACGGTGT
CAAACAAGGGGAGACATGGTGGCAAGGCAAGTACGGAGAGCGGTGGAATC
GTACTTGGGGTGAGGGTCACAACGGTTCCGGATGGGTGCACAAGTATGGG
AAGAGCAGCAGCGGCGAGCACTGGGATACTCATGTGCAGCAAGAGACGTG
GTACGAGAGGTACCCGCATTTTGGGTTTGAACATTGCTTTGAGAATTCGG
TCCAGTTACGTGAAGTTCGGAAACCATCCGATAGTCATGAGTCATGAAAT
TCGTATTTCGCTTTCATATTACCGTATGGATTATGGTGCATACGACATAT
ATGCAGGATATATAGTAGCTTACAGCCTTACAAAACTTGAAGAGAAAAAC
AGATCTGTTTTCTGAAGTTCTCTTGTATAAGTGTTACAATTCACATGCCA
TAAGAGTTGGATCTTCTTTCTGTATATCCTTTCTTCAAGCAAGAAAAAAT
CCATTTGGCAAAAAAAAACACAAAAAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated