CF810478
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF810478 vs. DB:swissprot:display
Match: DCAF1_ARATH (DDB1- and CUL4-associated factor homolog 1 OS=Arabidopsis thaliana GN=DCAF1 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.922e-12 Identity = 40/99 (40.40%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQ-DTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPL 354 Y S+ELLLLIHEHLQASGL TA LLKE QL + ++ + TP Q QWPSG GF + + K+ + E + + +++ KK L Sbjct: 1086 YDSKELLLLIHEHLQASGLGDTASALLKEAQLTPLPSSASPSSIAYSTTQEMSTPLAQEQWPSGRANSGFFTSKPKVCAHDEDPNSRSNAALSAKKKHL 1184 HSP 2 Score: 54.6842 bits (130), Expect = 4.147e-7 Identity = 38/121 (31.40%), Postives = 49/121 (40.50%), Query Frame = 1 Query: 217 TPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANLDNDVQFKTPIVLPMKRKLTELK 579 TP Q QWPSG GF KI +R E + + ++ KK L + Q A ET + +K +LD D QFKTPI P KRKL+EL+ Sbjct: 1193 TPVAQQQWPSGRANCGFCPSIPKINARDEDPSSRGNAAPSAKKKQLTFSPSFSSQSRKQSFSHDALPQSTQRINCCSNSDPALADTSETAAELVLKNDLDADAQFKTPISFPRKRKLSELR 1313
BLAST of CF810478 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s29460.1 () HSP 1 Score: 129.028 bits (323), Expect = 2.062e-30 Identity = 75/173 (43.35%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANLDNDVQFKTPIVLPMKRKLTELK 579 YHSRELLLLIHEHLQASGL++ A LLKE QL HQ+S Q+TP+IQI WPSG TP GFL ++ K T + S +KC+ V+S KK L + Q A P E P S K+N + + KTPI+LPMKRKL++LK Sbjct: 1021 YHSRELLLLIHEHLQASGLASAAAMLLKEAQLTPLPSLAAASSLSHQASTQETPSIQIHWPSGRTPCGFLYDKLKATGCSDNSSLKCEATVSSKKKSLVFSPTFGSQSRNQSQFIDSEQLPLKKVLSSLKQSTASPNPLEAPPESLQKSNPETESICKTPILLPMKRKLSDLK 1193
BLAST of CF810478 vs. P. persica 1.0 peptide
Match: ppa021958m () HSP 1 Score: 135.576 bits (340), Expect = 1.561e-32 Identity = 82/174 (47.13%), Postives = 97/174 (55.75%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVA-SAKKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANLDNDVQFKTPIVLPMKRKLTELK 579 YHSRELLLLIHEHLQASGL+ATA +LLKE QL VHQ++ Q+ P++Q+QWPSG TP GFL+ +SKIT+R E VK D + S KKPL + Q A ETPS S K D + KTPIVLPMKRKL+ELK Sbjct: 1060 YHSRELLLLIHEHLQASGLAATAASLLKEAQLMPLPSLAAPSSLVHQAT-QEAPSVQLQWPSGRTPSGFLTNKSKITARDEEPSVKFDSAFSYSKKKPLVFSPNFALQSRNQSQSHDSHWASARKVFGASKQFSATANASETPSASLPKPTFDTESPCKTPIVLPMKRKLSELK 1232
BLAST of CF810478 vs. TrEMBL
Match: D7SU71|D7SU71_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035587001 PE=4 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.550e-35 Identity = 86/174 (49.43%), Postives = 103/174 (59.20%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASA-KKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANLDNDVQFKTPIVLPMKRKLTELK 579 YHSRELLLLIHEHLQASGLS TA LLKE QL VHQ+S Q+TP++Q+QWPSG GGFLS + K T++ E S + D V+S+ KKPL + QP AP PETPS++ K NLD + Q+KTPI+LPMKRKLTELK Sbjct: 1069 YHSRELLLLIHEHLQASGLSTTAAQLLKEAQLTPLPSLAAPSSLVHQASSQETPSMQLQWPSGRIAGGFLSNKLKPTTKDEDSCLNSDSSVSSSKKKPLVFSSTLSFQFRNQPQSHDAQSPAISKVFSTSKKSSAPASVPETPSVTTSKPNLDAESQYKTPIILPMKRKLTELK 1242
BLAST of CF810478 vs. TrEMBL
Match: B9SPT7|B9SPT7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0205780 PE=4 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.733e-30 Identity = 76/173 (43.93%), Postives = 98/173 (56.65%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANLDNDVQFKTPIVLPMKRKLTELK 579 YHSRELLLL+HEHLQASGL+ATA TLLKE QL +HQ++ Q+TP+ Q+QWPSG TP GF+ ++SK +R E S ++C+ ++S KKPL +IQ L A E + K N D + KTPIVLPMKRKL++LK Sbjct: 1098 YHSRELLLLMHEHLQASGLAATAATLLKEAQLTPLPSLAAASSLMHQTTTQETPSTQLQWPSGRTPCGFMCKKSKAIARDEDSCLRCESALSSKKKPLVFSPTFNSQSRIQSLTLDSNQSSFKKASSGPKQSAAAGNLSEALPEALPKNNPDTESLCKTPIVLPMKRKLSDLK 1270
BLAST of CF810478 vs. TrEMBL
Match: B9N6E4|B9N6E4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1116776 PE=4 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.397e-28 Identity = 75/173 (43.35%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANLDNDVQFKTPIVLPMKRKLTELK 579 YHSRELLLLIHEHLQASGL++ A LLKE QL HQ+S Q+TP+IQI WPSG TP GFL ++ K T + S +KC+ V+S KK L + Q A P E P S K+N + + KTPI+LPMKRKL++LK Sbjct: 1021 YHSRELLLLIHEHLQASGLASAAAMLLKEAQLTPLPSLAAASSLSHQASTQETPSIQIHWPSGRTPCGFLYDKLKATGCSDNSSLKCEATVSSKKKSLVFSPTFGSQSRNQSQFIDSEQLPLKKVLSSLKQSTASPNPLEAPPESLQKSNPETESICKTPILLPMKRKLSDLK 1193
BLAST of CF810478 vs. TrEMBL
Match: A5B712|A5B712_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039616 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.845e-13 Identity = 45/95 (47.37%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 70 RELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPL 354 +ELLLLI EHLQASGLS TA LLKE QL V+ + Q+TP++Q+QWPSG GGFLS + K ++ S +K D + +KPL Sbjct: 88 KELLLLIPEHLQASGLSTTAARLLKEAQLTPWTSLAASSSLVYPAFSQETPSMQLQWPSGRIAGGFLSNKLKPPTKDRGSCLKSDSSM--TEKPL 180
BLAST of CF810478 vs. TrEMBL
Match: D7MB91|D7MB91_ARALY (Transducin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491627 PE=4 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.716e-13 Identity = 42/99 (42.42%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQ-DTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPL 354 Y S+ELLLLIHEHLQASGL TA LLKE QL + S+ + TP Q QWPSG GF + + K+ + E +C+ +++ KK L Sbjct: 1055 YDSKELLLLIHEHLQASGLGETASALLKEAQLTPLPSLASPSSIAYSSTQEMSTPLAQEQWPSGRANSGFFTSKPKVCAHDEDPNSRCNAAISAKKKHL 1153
BLAST of CF810478 vs. TrEMBL
Match: Q7XKA7|Q7XKA7_ORYSJ (OSJNBb0020J19.2 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0020J19.2 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.254e-10 Identity = 56/174 (32.18%), Postives = 78/174 (44.83%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANL-DNDVQFKTPIVLPMKRKLTELK 579 YHSREL+ LIHEHL SG +ATA L KE L VHQ + +T + Q QWPSG GF+ + +K+T+ + + + D + S+KK + QP P G + +A N D + KTP+ LP KRKL ++K Sbjct: 1167 YHSRELMQLIHEHLLGSGFTATAAMLQKEADL-APLPSTAAVTPVHQVAALETSSAQQQWPSGRVQ-GFVPDTTKVTT--DQTGQRSDSVLPSSKKK-SLSFSSSFSKRTQP-----SHLFSGNRASNSLKSPVPIGNVDNMICAASTVNTGDAETSHKTPLSLPQKRKLVDMK 1330
BLAST of CF810478 vs. TrEMBL
Match: Q259V1|Q259V1_ORYSA (B0518A01.3 protein OS=Oryza sativa GN=B0518A01.3 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.254e-10 Identity = 56/174 (32.18%), Postives = 78/174 (44.83%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANL-DNDVQFKTPIVLPMKRKLTELK 579 YHSREL+ LIHEHL SG +ATA L KE L VHQ + +T + Q QWPSG GF+ + +K+T+ + + + D + S+KK + QP P G + +A N D + KTP+ LP KRKL ++K Sbjct: 1166 YHSRELMQLIHEHLLGSGFTATAAMLQKEADL-APLPSTAAVTPVHQVAALETSSAQQQWPSGRVQ-GFVPDTTKVTT--DQTGQRSDSVLPSSKKK-SLSFSSSFSKRTQP-----SYLFSGNRASNSLKSPVPIGNVDNMICAASTVNTGDAETSHKTPLSLPQKRKLVDMK 1329
BLAST of CF810478 vs. TrEMBL
Match: A3AYX5|A3AYX5_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_16734 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.254e-10 Identity = 56/174 (32.18%), Postives = 78/174 (44.83%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANL-DNDVQFKTPIVLPMKRKLTELK 579 YHSREL+ LIHEHL SG +ATA L KE L VHQ + +T + Q QWPSG GF+ + +K+T+ + + + D + S+KK + QP P G + +A N D + KTP+ LP KRKL ++K Sbjct: 1167 YHSRELMQLIHEHLLGSGFTATAAMLQKEADL-APLPSTAAVTPVHQVAALETSSAQQQWPSGRVQ-GFVPDTTKVTT--DQTGQRSDSVLPSSKKK-SLSFSSSFSKRTQP-----SHLFSGNRASNSLKSPVPIGNVDNMICAASTVNTGDAETSHKTPLSLPQKRKLVDMK 1330
BLAST of CF810478 vs. TrEMBL
Match: A2XZA0|A2XZA0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18041 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.254e-10 Identity = 56/174 (32.18%), Postives = 78/174 (44.83%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANL-DNDVQFKTPIVLPMKRKLTELK 579 YHSREL+ LIHEHL SG +ATA L KE L VHQ + +T + Q QWPSG GF+ + +K+T+ + + + D + S+KK + QP P G + +A N D + KTP+ LP KRKL ++K Sbjct: 1086 YHSRELMQLIHEHLLGSGFTATAAMLQKEADL-APLPSTAAVTPVHQVAALETSSAQQQWPSGRVQ-GFVPDTTKVTT--DQTGQRSDSVLPSSKKK-SLSFSSSFSKRTQP-----SHLFSGNRASNSLKSPVPIGNVDNMICAASTVNTGDAETSHKTPLSLPQKRKLVDMK 1249
BLAST of CF810478 vs. TrEMBL
Match: C5YB39|C5YB39_SORBI (Putative uncharacterized protein Sb06g034000 OS=Sorghum bicolor GN=Sb06g034000 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.237e-8 Identity = 54/173 (31.21%), Postives = 73/173 (42.20%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANLDNDVQFKTPIVLPMKRKLTELK 579 YHSREL+ LIHEHL SG +ATA L KE L HQ + + ++Q QWPSG GFLS+ KI + S + D + S+KK + P + P I D ++ KTP+ LP+KRKL ++K Sbjct: 1169 YHSRELMQLIHEHLLGSGFTATAAMLQKEAGL-APLPLTAAVLPAHQVAALEASSVQQQWPSGRVQ-GFLSD--KINMSTDQSAQRSDSILPSSKKKALTFSSSFSRRALSP----------HPISGSRASNILKSPVPIAADIG------DAEMLNKTPLSLPLKRKLVDVK 1321
BLAST of CF810478 vs. Vitis vinifera peptide
Match: GSVIVT01035587001 (assembled CDS) HSP 1 Score: 152.91 bits (385), Expect = 8.196e-38 Identity = 86/174 (49.43%), Postives = 103/174 (59.20%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQDTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASA-KKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANLDNDVQFKTPIVLPMKRKLTELK 579 YHSRELLLLIHEHLQASGLS TA LLKE QL VHQ+S Q+TP++Q+QWPSG GGFLS + K T++ E S + D V+S+ KKPL + QP AP PETPS++ K NLD + Q+KTPI+LPMKRKLTELK Sbjct: 1069 YHSRELLLLIHEHLQASGLSTTAAQLLKEAQLTPLPSLAAPSSLVHQASSQETPSMQLQWPSGRIAGGFLSNKLKPTTKDEDSCLNSDSSVSSSKKKPLVFSSTLSFQFRNQPQSHDAQSPAISKVFSTSKKSSAPASVPETPSVTTSKPNLDAESQYKTPIILPMKRKLTELK 1242
BLAST of CF810478 vs. TAIR peptide
Match: AT4G31160.1 (| Symbols: DCAF1 | DDB1-CUL4 associated factor 1 | chr4:15145936-15152939 FORWARD LENGTH=1883) HSP 1 Score: 72.4034 bits (176), Expect = 2.018e-13 Identity = 40/99 (40.40%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 61 YHSRELLLLIHEHLQASGLSATADTLLKEGQLNXXXXXXXXXXXVHQSSVQ-DTPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPL 354 Y S+ELLLLIHEHLQASGL TA LLKE QL + ++ + TP Q QWPSG GF + + K+ + E + + +++ KK L Sbjct: 1086 YDSKELLLLIHEHLQASGLGDTASALLKEAQLTPLPSSASPSSIAYSTTQEMSTPLAQEQWPSGRANSGFFTSKPKVCAHDEDPNSRSNAALSAKKKHL 1184 HSP 2 Score: 54.6842 bits (130), Expect = 4.354e-8 Identity = 38/121 (31.40%), Postives = 49/121 (40.50%), Query Frame = 1 Query: 217 TPAIQIQWPSGHTPGGFLSERSKITSRGEVSRVKCDLDVASAKKPLXXXXXXXXXXKIQPLXXXXXXXXXXXXXXXXXXXXAPTGPPETPSISAVKANLDNDVQFKTPIVLPMKRKLTELK 579 TP Q QWPSG GF KI +R E + + ++ KK L + Q A ET + +K +LD D QFKTPI P KRKL+EL+ Sbjct: 1193 TPVAQQQWPSGRANCGFCPSIPKINARDEDPSSRGNAAPSAKKKQLTFSPSFSSQSRKQSFSHDALPQSTQRINCCSNSDPALADTSETAAELVLKNDLDADAQFKTPISFPRKRKLSELR 1313 The following BLAST results are available for this feature:
BLAST of CF810478 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot) Total hits: 1
BLAST of CF810478 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CF810478 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CF810478 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 10
BLAST of CF810478 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of CF810478 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF810478 ID=CF810478; Name=CF810478; organism=Vaccinium corymbosum; type=EST; length=593bpback to top |