CF811073 | GDV

EST Overview


Name	CF811073
Unique Name	CF811073
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	584

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF811073 vs. DB:swissprot:display
Match: RRP31_ARATH (30S ribosomal protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=At1g68590 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.037e-35
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = -2

Query:  257 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNLNN 490
            KF+WMEKNIGLGLDQ + GHGT+PLSPYFFWPRKD WEELK+ LE+KPWISQK+MIILLNQATDIIN WQQSGGNL +
Sbjct:   88 KFVWMEKNIGLGLDQHVPGHGTIPLSPYFFWPRKDAWEELKSTLEAKPWISQKKMIILLNQATDIINLWQQSGGNLTS 165

[Close]

BLAST of CF811073 vs. DB:swissprot:display
Match: RRP3_SPIOL (30S ribosomal protein 3, chloroplastic OS=Spinacia oleracea GN=PSRP3 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.724e-34
Identity = 66/76 (86.84%), Postives = 69/76 (90.79%), Query Frame = -2

Query:  263 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNL 490
            KFIWMEKNIGL LDQ I GHGTVPLSPY+FWPRKD WEELK  LE+KPWISQK+MIILLNQATDIIN WQQSGGNL
Sbjct:  102 KFIWMEKNIGLALDQTIPGHGTVPLSPYYFWPRKDAWEELKVLLENKPWISQKQMIILLNQATDIINLWQQSGGNL 177

[Close]

BLAST of CF811073 vs. DB:swissprot:display
Match: RRP3_HORVU (30S ribosomal protein 3, chloroplastic OS=Hordeum vulgare GN=PSRP3 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.156e-30
Identity = 58/77 (75.32%), Postives = 67/77 (87.01%), Query Frame = -2

Query:  260 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNLN 490
            KFIWMEKNIG+ LDQM+ G G++PLSPY+FWPRKD WEEL+  LE K WISQK+MIILLNQATDIIN WQQ GG+L+
Sbjct:  104 KFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILLNQATDIINLWQQGGGSLS 180

[Close]

BLAST of CF811073 vs. DB:swissprot:display
Match: RRP32_ARATH (30S ribosomal protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=At5g15760 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.181e-29
Identity = 55/77 (71.43%), Postives = 65/77 (84.42%), Query Frame = -2

Query:  260 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNLN 490
            KF+WM+K+IG+ LD MI G GT+PLSPY+FWPRKD WEELKT LESKPWIS+   + LLNQATDIIN WQ SGG+L+
Sbjct:  107 KFVWMQKDIGVALDHMIPGFGTIPLSPYYFWPRKDAWEELKTLLESKPWISELHRVFLLNQATDIINLWQSSGGDLS 183

[Close]

BLAST of CF811073 vs. DB:swissprot:display
Match: RRP3_PORYE (Probable 30S ribosomal protein 3, chloroplastic OS=Porphyra yezoensis GN=ycf65 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.851e-20
Identity = 41/73 (56.16%), Postives = 56/73 (76.71%), Query Frame = -2

Query:  272 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSG 490
            K +W+E NI + +DQ++ G+GT PL+ YFFWPR D WEELK  LESKPWI+++  I LLN+ T++IN WQ+ G
Sbjct:   12 KVLWLENNIAIAIDQIV-GNGTSPLTSYFFWPRNDAWEELKAELESKPWIAERDRIELLNKTTEVINYWQEEG 83

[Close]

BLAST of CF811073 vs. DB:swissprot:display
Match: RRP3_PORPU (Probable 30S ribosomal protein 3, chloroplastic OS=Porphyra purpurea GN=ycf65 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.851e-20
Identity = 41/73 (56.16%), Postives = 56/73 (76.71%), Query Frame = -2

Query:  272 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSG 490
            K +W+E NI + +DQ++ G+GT PL+ YFFWPR D WEELK  LESKPWI+++  I LLN+ T++IN WQ+ G
Sbjct:    7 KVLWLENNIAIAIDQIV-GNGTSPLTSYFFWPRNDAWEELKAELESKPWIAERDRIELLNKTTEVINYWQEEG 78

[Close]

BLAST of CF811073 vs. DB:swissprot:display
Match: RRP3_CYAP4 (Probable 30S ribosomal protein PSRP-3 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=Cyan7425_0465 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.417e-20
Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = -2

Query:  266 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGN 490
            K +W++ N+ L +DQ++ G GT PL+ YFFWPR D WE+LKT LE K WIS+   I LLN+ATDIIN WQ+ G N
Sbjct:   17 KVLWLDSNVALAVDQVV-GKGTSPLTSYFFWPRADAWEQLKTELEKKTWISEADRIALLNRATDIINYWQEEGRN 90

[Close]

BLAST of CF811073 vs. DB:swissprot:display
Match: RRP3_ANAVT (Probable 30S ribosomal protein PSRP-3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=Ava_3866 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.046e-19
Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = -2

Query:  266 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGN 490
            K +W+++N+ L +DQ++ G GT PL+ YFFWPR D WEELK  LESK WIS    + LLN+AT++IN WQ+ G N
Sbjct:    7 KILWLDENVALAVDQVV-GKGTSPLTKYFFWPRNDAWEELKKELESKHWISDLDRVELLNKATEVINYWQEEGRN 80

[Close]

BLAST of CF811073 vs. DB:swissprot:display
Match: RRP3_ANASP (Probable 30S ribosomal protein PSRP-3 OS=Anabaena sp. (strain PCC 7120) GN=asr3168 PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.046e-19
Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = -2

Query:  266 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGN 490
            K +W+++N+ L +DQ++ G GT PL+ YFFWPR D WEELK  LESK WIS    + LLN+AT++IN WQ+ G N
Sbjct:    7 KILWLDENVALAVDQVV-GKGTSPLTKYFFWPRNDAWEELKKELESKHWISDLDRVELLNKATEVINYWQEEGRN 80

[Close]

BLAST of CF811073 vs. DB:swissprot:display
Match: RRP3_NOSP7 (Probable 30S ribosomal protein PSRP-3 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_F4413 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.558e-19
Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = -2

Query:  266 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGN 490
            K +W+++N+ L +DQ++ G GT PL+ YFFWPR D WEELK  LESK WI+    + LLN+AT++IN WQ+ G N
Sbjct:    7 KILWLDENVALAVDQIV-GKGTSPLTKYFFWPRNDAWEELKKELESKHWITDLDRVELLNKATEVINYWQEEGRN 80

[Close]

BLAST of CF811073 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s13740.1 ()

HSP 1 Score: 149.058 bits (375), Expect = 1.868e-36
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = -2

Query:  263 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNL 490
            KFIWMEKNIGL LDQ+I GHGTVPLSPYFFWPRKD WEELK  LESKPWISQK+MIILLNQATDIIN WQQSGGNL
Sbjct:  111 KFIWMEKNIGLALDQVIPGHGTVPLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQQSGGNL 186

[Close]

BLAST of CF811073 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s11750.1 ()

HSP 1 Score: 148.673 bits (374), Expect = 2.440e-36
Identity = 67/76 (88.16%), Postives = 70/76 (92.11%), Query Frame = -2

Query:  263 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNL 490
            KF+WMEKNIGL LDQ+I GHGTVPLSPYFFWPRKD WEELK  LESKPWISQK+MIILLNQATDIIN WQQSGGNL
Sbjct:  111 KFVWMEKNIGLALDQVIPGHGTVPLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQQSGGNL 186

[Close]

BLAST of CF811073 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s10020.1 ()

HSP 1 Score: 112.849 bits (281), Expect = 1.484e-25
Identity = 47/75 (62.67%), Postives = 61/75 (81.33%), Query Frame = -2

Query:  266 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGN 490
            KFIWM+K IG+ L+Q+I GHGT+PLSPY+FWP++D WE+L+  L  KPWIS+K++  LLNQATDII  WQ +G N
Sbjct:  100 KFIWMQKVIGIALNQVIPGHGTIPLSPYYFWPKEDAWEQLRLLLVGKPWISRKQLHDLLNQATDIIELWQDTGSN 174

[Close]

BLAST of CF811073 vs. P. persica 1.0 peptide
Match: ppa011873m ()

HSP 1 Score: 146.362 bits (368), Expect = 8.700e-36
Identity = 65/76 (85.53%), Postives = 70/76 (92.11%), Query Frame = -2

Query:  263 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNL 490
            KFIWMEKNIG+ LDQMI GHG++PLSPY+FWPRKD WEELK  LESKPWISQK+MIILLNQATDIIN WQQSGGNL
Sbjct:  116 KFIWMEKNIGIALDQMIPGHGSIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 191

[Close]

BLAST of CF811073 vs. TrEMBL
Match: B9ST11|B9ST11_RICCO (Plastid-specific 30S ribosomal protein 3, chloroplast, putative OS=Ricinus communis GN=RCOM_0353270 PE=4 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.350e-35
Identity = 68/76 (89.47%), Postives = 71/76 (93.42%), Query Frame = -2

Query:  263 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNL 490
            KFIWMEKNIGL LDQ+I GHGT+PLSPYFFWPRKD WEELKT LESKPWISQK+MIILLNQATDIIN WQQSGGNL
Sbjct:  103 KFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIINLWQQSGGNL 178

[Close]

BLAST of CF811073 vs. TrEMBL
Match: B7FMM7|B7FMM7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.350e-35
Identity = 67/78 (85.90%), Postives = 73/78 (93.59%), Query Frame = -2

Query:  257 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNLNN 490
            KFIWMEKNIG+GLDQMI GHGT+PLSPY+FWPRKD WEELK  LESKPWISQK+MIILLNQATDIIN WQQSGGNL++
Sbjct:   84 KFIWMEKNIGIGLDQMIPGHGTIPLSPYYFWPRKDAWEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNLSS 161

[Close]

BLAST of CF811073 vs. TrEMBL
Match: B9HWJ9|B9HWJ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1090939 PE=4 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.138e-34
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = -2

Query:  263 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNL 490
            KFIWMEKNIGL LDQ+I GHGTVPLSPYFFWPRKD WEELK  LESKPWISQK+MIILLNQATDIIN WQQSGGNL
Sbjct:  111 KFIWMEKNIGLALDQVIPGHGTVPLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQQSGGNL 186

[Close]

BLAST of CF811073 vs. TrEMBL
Match: D7KWE0|D7KWE0_ARALY (Plastid-specific ribosomal protein 3 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475984 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.793e-34
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = -2

Query:  257 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNLNN 490
            KF+WMEKNIGLGLDQ + GHGT+PLSPYFFWPRKD WEELK+ LE+KPWISQK+MIILLNQATDIIN WQQSGGNL +
Sbjct:   84 KFVWMEKNIGLGLDQHVPGHGTIPLSPYFFWPRKDAWEELKSTLEAKPWISQKKMIILLNQATDIINLWQQSGGNLTS 161

[Close]

BLAST of CF811073 vs. TrEMBL
Match: B9HJ10|B9HJ10_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1085037 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.793e-34
Identity = 67/76 (88.16%), Postives = 70/76 (92.11%), Query Frame = -2

Query:  263 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNL 490
            KF+WMEKNIGL LDQ+I GHGTVPLSPYFFWPRKD WEELK  LESKPWISQK+MIILLNQATDIIN WQQSGGNL
Sbjct:  111 KFVWMEKNIGLALDQVIPGHGTVPLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQQSGGNL 186

[Close]

BLAST of CF811073 vs. TrEMBL
Match: A8MQL0|A8MQL0_ARATH (Uncharacterized protein At1g68590.2 OS=Arabidopsis thaliana GN=At1g68590 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.793e-34
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = -2

Query:  257 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNLNN 490
            KF+WMEKNIGLGLDQ + GHGT+PLSPYFFWPRKD WEELK+ LE+KPWISQK+MIILLNQATDIIN WQQSGGNL +
Sbjct:   85 KFVWMEKNIGLGLDQHVPGHGTIPLSPYFFWPRKDAWEELKSTLEAKPWISQKKMIILLNQATDIINLWQQSGGNLTS 162

[Close]

BLAST of CF811073 vs. TrEMBL
Match: C6SYP6|C6SYP6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.386e-33
Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = -2

Query:  260 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNLN 490
            KFIWMEKNIG+ LDQM+ GHGT+PLSPY+FWPRKD WEELK  LE+KPWISQK+MIILLNQATDIIN WQQSGGNL+
Sbjct:   82 KFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDAWEELKELLENKPWISQKQMIILLNQATDIINLWQQSGGNLS 158

[Close]

BLAST of CF811073 vs. TrEMBL
Match: D7TT40|D7TT40_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031053001 PE=4 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.267e-33
Identity = 64/76 (84.21%), Postives = 69/76 (90.79%), Query Frame = -2

Query:  263 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNL 490
            KFIWMEKNIG+ LDQ I GHGT+PLSPY+FWPRKD WEE+K  LESKPWISQK+MIILLNQATDIIN WQQSGGNL
Sbjct:   99 KFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 174

[Close]

BLAST of CF811073 vs. TrEMBL
Match: A9P110|A9P110_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.409e-31
Identity = 60/76 (78.95%), Postives = 66/76 (86.84%), Query Frame = -2

Query:  263 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNL 490
            KFIW+EKNIGL LDQ++ GHGT+PLSPY+FWPRKD WEELK  LESK WISQKR IILLNQATDIIN WQQ G N+
Sbjct:  136 KFIWLEKNIGLALDQVVPGHGTIPLSPYYFWPRKDAWEELKAKLESKSWISQKRTIILLNQATDIINLWQQGGSNI 211

[Close]

BLAST of CF811073 vs. TrEMBL
Match: A5BV81|A5BV81_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004015 PE=4 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.434e-30
Identity = 60/75 (80.00%), Postives = 68/75 (90.67%), Query Frame = -2

Query:  266 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGN 490
            KF+WMEKNIG+ LDQ+I G+GT PLSPY+FWP KD WEELK+ LESKPWISQK+MIILLN+ATDIIN WQQSGGN
Sbjct:  103 KFVWMEKNIGVALDQVIPGYGTNPLSPYYFWPGKDAWEELKSTLESKPWISQKKMIILLNEATDIINLWQQSGGN 177

[Close]

BLAST of CF811073 vs. Vitis vinifera peptide
Match: GSVIVT01031053001 (assembled CDS)

HSP 1 Score: 144.436 bits (363), Expect = 2.832e-35
Identity = 64/76 (84.21%), Postives = 69/76 (90.79%), Query Frame = -2

Query:  263 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNL 490
            KFIWMEKNIG+ LDQ I GHGT+PLSPY+FWPRKD WEE+K  LESKPWISQK+MIILLNQATDIIN WQQSGGNL
Sbjct:   99 KFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 174

[Close]

BLAST of CF811073 vs. Vitis vinifera peptide
Match: GSVIVT01011921001 (assembled CDS)

HSP 1 Score: 65.0846 bits (157), Expect = 2.183e-11
Identity = 36/75 (48.00%), Postives = 39/75 (52.00%), Query Frame = -2

Query:  266 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGN 490
            KF+WMEKNIG                                   SKPWISQK+MIILLN+ATDIIN WQQSGGN
Sbjct:   44 KFVWMEKNIG-----------------------------------SKPWISQKKMIILLNEATDIINLWQQSGGN 83

[Close]

BLAST of CF811073 vs. TAIR peptide
Match: AT1G68590.2 (| Symbols: | Ribosomal protein PSRP-3/Ycf65 | chr1:25757593-25758169 REVERSE LENGTH=163)

HSP 1 Score: 148.673 bits (374), Expect = 2.151e-36
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = -2

Query:  257 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNLNN 490
            KF+WMEKNIGLGLDQ + GHGT+PLSPYFFWPRKD WEELK+ LE+KPWISQK+MIILLNQATDIIN WQQSGGNL +
Sbjct:   85 KFVWMEKNIGLGLDQHVPGHGTIPLSPYFFWPRKDAWEELKSTLEAKPWISQKKMIILLNQATDIINLWQQSGGNLTS 162

[Close]

BLAST of CF811073 vs. TAIR peptide
Match: AT1G68590.1 (| Symbols: | Ribosomal protein PSRP-3/Ycf65 | chr1:25757593-25758169 REVERSE LENGTH=166)

HSP 1 Score: 148.673 bits (374), Expect = 2.151e-36
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = -2

Query:  257 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNLNN 490
            KF+WMEKNIGLGLDQ + GHGT+PLSPYFFWPRKD WEELK+ LE+KPWISQK+MIILLNQATDIIN WQQSGGNL +
Sbjct:   88 KFVWMEKNIGLGLDQHVPGHGTIPLSPYFFWPRKDAWEELKSTLEAKPWISQKKMIILLNQATDIINLWQQSGGNLTS 165

[Close]

BLAST of CF811073 vs. TAIR peptide
Match: AT5G15760.1 (| Symbols: | Ribosomal protein PSRP-3/Ycf65 | chr5:5143100-5143905 FORWARD LENGTH=183)

HSP 1 Score: 128.642 bits (322), Expect = 2.303e-30
Identity = 55/77 (71.43%), Postives = 65/77 (84.42%), Query Frame = -2

Query:  260 KFIWMEKNIGLGLDQMIQGHGTVPLSPYFFWPRKDXWEELKTXLESKPWISQKRMIILLNQATDIINXWQQSGGNLN 490
            KF+WM+K+IG+ LD MI G GT+PLSPY+FWPRKD WEELKT LESKPWIS+   + LLNQATDIIN WQ SGG+L+
Sbjct:  107 KFVWMQKDIGVALDHMIPGFGTIPLSPYYFWPRKDAWEELKTLLESKPWISELHRVFLLNQATDIINLWQSSGGDLS 183

The following BLAST results are available for this feature:

BLAST of CF811073 vs. DB:swissprot:display
BLAST of CF811073 vs. Populus trichocarpa peptide v2.0
BLAST of CF811073 vs. P. persica 1.0 peptide
BLAST of CF811073 vs. TrEMBL
BLAST of CF811073 vs. Vitis vinifera peptide
BLAST of CF811073 vs. TAIR peptide

BLAST of CF811073 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RRP31_ARATH	2.037e-35	83.33	30S ribosomal protein 3-1, chloroplastic OS=Arabid...	[more]
RRP3_SPIOL	1.724e-34	86.84	30S ribosomal protein 3, chloroplastic OS=Spinacia...	[more]
RRP3_HORVU	1.156e-30	75.32	30S ribosomal protein 3, chloroplastic OS=Hordeum ...	[more]
RRP32_ARATH	2.181e-29	71.43	30S ribosomal protein 3-2, chloroplastic OS=Arabid...	[more]
RRP3_PORYE	1.851e-20	56.16	Probable 30S ribosomal protein 3, chloroplastic OS...	[more]
RRP3_PORPU	1.851e-20	56.16	Probable 30S ribosomal protein 3, chloroplastic OS...	[more]
RRP3_CYAP4	2.417e-20	57.33	Probable 30S ribosomal protein PSRP-3 OS=Cyanothec...	[more]
RRP3_ANAVT	2.046e-19	54.67	Probable 30S ribosomal protein PSRP-3 OS=Anabaena ...	[more]
RRP3_ANASP	2.046e-19	54.67	Probable 30S ribosomal protein PSRP-3 OS=Anabaena ...	[more]
RRP3_NOSP7	4.558e-19	53.33	Probable 30S ribosomal protein PSRP-3 OS=Nostoc pu...	[more]

BLAST of CF811073 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0010s13740.1	1.868e-36	89.47	[more]
POPTR_0008s11750.1	2.440e-36	88.16	[more]
POPTR_0004s10020.1	1.484e-25	62.67	[more]

BLAST of CF811073 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa011873m	8.700e-36	85.53		[more]

BLAST of CF811073 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9ST11\|B9ST11_RICCO	7.350e-35	89.47	Plastid-specific 30S ribosomal protein 3, chloropl...	[more]
B7FMM7\|B7FMM7_MEDTR	7.350e-35	85.90	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9HWJ9\|B9HWJ9_POPTR	2.138e-34	89.47	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7KWE0\|D7KWE0_ARALY	2.793e-34	83.33	Plastid-specific ribosomal protein 3 OS=Arabidopsi...	[more]
B9HJ10\|B9HJ10_POPTR	2.793e-34	88.16	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A8MQL0\|A8MQL0_ARATH	2.793e-34	83.33	Uncharacterized protein At1g68590.2 OS=Arabidopsis...	[more]
C6SYP6\|C6SYP6_SOYBN	1.386e-33	83.12	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7TT40\|D7TT40_VITVI	5.267e-33	84.21	Whole genome shotgun sequence of line PN40024, sca...	[more]
A9P110\|A9P110_PICSI	8.409e-31	78.95	Putative uncharacterized protein OS=Picea sitchens...	[more]
A5BV81\|A5BV81_VITVI	1.434e-30	80.00	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of CF811073 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01031053001	2.832e-35	84.21	assembled CDS	[more]
GSVIVT01011921001	2.183e-11	48.00	assembled CDS	[more]

BLAST of CF811073 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G68590.2	2.151e-36	83.33	\| Symbols: \| Ribosomal protein PSRP-3/Ycf65 \| chr...	[more]
AT1G68590.1	2.151e-36	83.33	\| Symbols: \| Ribosomal protein PSRP-3/Ycf65 \| chr...	[more]
AT5G15760.1	2.303e-30	71.43	\| Symbols: \| Ribosomal protein PSRP-3/Ycf65 \| chr...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006924	Ribosomal protein PSRP-3/Ycf65	PFAM	PF04839	PSRP-3_Ycf65	coord: 33..80 score: 3.7

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF811073 ID=CF811073; Name=CF811073; organism=Vaccinium corymbosum; type=EST; length=584bp
GGNTTAGAAATGCAGAATTGATAATCAAGTTGGCTTAAATCACAGCCATA
GTATTCTGGTAAATAATTATAAGAATTTAATTTGCCTAATCAAATTCGAA
TATTGCAACACTCAAAGGNATAACAAAATTTACCAATCGAAGTTTACAAG
CAAAGTGAGCCTTCTAAATCAACAAACTCGAATTACTCTACAACCAAAAG
CACTGAGCACCGCATTTAAATTTGAATCATAAACATGAAGAGTGCATCAT
TTATCAGTTGTTTAAGTTGCCACCGCTTTGCTGCCAGANATTGATGATAT
CAGTGGCCTGATTGAGTAGTATGATCATTCTCTTTTGCGATATCCATGGC
TTACTCTCAAGAGNGGTTTTGAGCTCTTCCCATGNATCTTTCCTCGGCCA
GAAGAAGTACGGACTCAAAGGNACGGTGCCGTGGCCTTGTATCATTTGAT
CAAGCCCTAGACCTATGTTCTTCTCCATCCATATGAACTTCAACACTAGC
CTTGGGCTTCTTCTTCACCTCCACCTCAGGCTCANGCTCAGGCTCCTCCG
TTTCTTTGGGAAGAAAAAGGGCATCTGANTCTTR

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome
GO:0009536	plastid

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR006924	Ribosomal_PSRP3/Ycf65