CF811095

EST Overview
NameCF811095
Unique NameCF811095
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length198
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
[Close]
BLAST of CF811095 vs. DB:swissprot:display
Match: RTNLS_ARATH (Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.014e-20
Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I +W +AK GF G FT+PKI  SYS   + YG FW+RRF+DAWESC+ KKAVA  +FTLVWN S
Sbjct:  354 ITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESCNHKKAVALALFTLVWNLS 417
[Close]
BLAST of CF811095 vs. DB:swissprot:display
Match: RTNLR_ARATH (Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 1.350e-7
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = -2 
Query:    9 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWN 194
            I +W++   GFF  FT+PK+ S Y+ QL    +   RRF +AW  C+ KK VA    T  WN
Sbjct:  318 ITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFVEAWGVCTHKKFVAGSAVTAFWN 379
[Close]
BLAST of CF811095 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s19970.1 ()

HSP 1 Score: 115.161 bits (287), Expect = 1.035e-26
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I IWKMAKLGFFGVF VPK+ SSYS QLT YGKFW+RRF+DAWESCS KKAVA GIF+LVWN S
Sbjct:  594 ITIWKMAKLGFFGVFIVPKVCSSYSTQLTAYGKFWIRRFRDAWESCSHKKAVALGIFSLVWNLS 657
[Close]
BLAST of CF811095 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s11750.1 ()

HSP 1 Score: 114.39 bits (285), Expect = 1.766e-26
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I IWKMA+LGFFGVFTVPK+ SSYS QLT YGKFW+RRF+DAWESCS KKAVA  IFTLVWN S
Sbjct:  581 ITIWKMARLGFFGVFTVPKVCSSYSTQLTAYGKFWIRRFRDAWESCSHKKAVALCIFTLVWNLS 644
[Close]
BLAST of CF811095 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0007s01150.1 ()

HSP 1 Score: 50.0618 bits (118), Expect = 4.089e-7
Identity = 23/64 (35.94%), Postives = 35/64 (54.69%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            + + ++  +GFF  FT+PK+ + YS Q+    +    R  +AW +CS KK VA    T  WN S
Sbjct:  314 VTLRRLCAIGFFISFTIPKLYACYSSQIKQKAEQMKNRMFEAWGACSHKKIVAASAVTAFWNLS 377
[Close]
BLAST of CF811095 vs. P. persica 1.0 peptide
Match: ppa002580m ()

HSP 1 Score: 99.7525 bits (247), Expect = 2.940e-22
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I IW M+K+GFFGVFT+PK+ S YS QLT Y KFW+RRF+DAWESC+ KKA+   IF LVWN S
Sbjct:  516 ITIWTMSKVGFFGVFTLPKVCSLYSAQLTVYAKFWIRRFRDAWESCTHKKALTVAIFLLVWNLS 579
[Close]
BLAST of CF811095 vs. P. persica 1.0 peptide
Match: ppa014722m ()

HSP 1 Score: 51.9878 bits (123), Expect = 7.030e-8
Identity = 28/67 (41.79%), Postives = 37/67 (55.22%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYG---KFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I +W++  L FF  FT+PK+ S YS Q+       K+WV    +AW +CS KK VA    T  WN S
Sbjct:  305 ITLWRLCMLAFFISFTIPKLYSCYSIQMNQKVECLKWWV---LEAWGACSHKKIVAASAATAFWNLS 368
[Close]
BLAST of CF811095 vs. TrEMBL
Match: B9T6V6|B9T6V6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0370390 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.702e-24
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I IWKMAKLGFFGVFTVPK+ SSYS QLT YGKFW+RRF+DAW+SCS KKAVA  IFTLVWN S
Sbjct:  474 ITIWKMAKLGFFGVFTVPKVCSSYSTQLTAYGKFWIRRFRDAWDSCSHKKAVALAIFTLVWNLS 537
[Close]
BLAST of CF811095 vs. TrEMBL
Match: B9HB09|B9HB09_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_561321 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.222e-24
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I IWKMAKLGFFGVF VPK+ SSYS QLT YGKFW+RRF+DAWESCS KKAVA GIF+LVWN S
Sbjct:  594 ITIWKMAKLGFFGVFIVPKVCSSYSTQLTAYGKFWIRRFRDAWESCSHKKAVALGIFSLVWNLS 657
[Close]
BLAST of CF811095 vs. TrEMBL
Match: B9IME9|B9IME9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_835954 PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.791e-24
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I IWKMA+LGFFGVFTVPK+ SSYS QLT YGKFW+RRF+DAWESCS KKAVA  IFTLVWN S
Sbjct:  399 ITIWKMARLGFFGVFTVPKVCSSYSTQLTAYGKFWIRRFRDAWESCSHKKAVALCIFTLVWNLS 462
[Close]
BLAST of CF811095 vs. TrEMBL
Match: B7FN98|B7FN98_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.904e-22
Identity = 48/64 (75.00%), Postives = 53/64 (82.81%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I +WKMAK+GFFGVF VPKI SSYS QLT Y  FWVRRF+DAW+SC+ KKAVA GIF LVWN S
Sbjct:   44 ITLWKMAKIGFFGVFIVPKICSSYSAQLTAYANFWVRRFRDAWDSCTHKKAVALGIFGLVWNLS 107
[Close]
BLAST of CF811095 vs. TrEMBL
Match: C5YKG5|C5YKG5_SORBI (Putative uncharacterized protein Sb07g018020 OS=Sorghum bicolor GN=Sb07g018020 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.179e-19
Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I +W +AKL FFGVF +PK+ SSYS QL  YGKFW+ R +DAWESCS KKAV   +FTLVWN S
Sbjct:  437 ITLWTLAKLVFFGVFIIPKVCSSYSTQLARYGKFWLERLRDAWESCSHKKAVVAAVFTLVWNVS 500
[Close]
BLAST of CF811095 vs. TrEMBL
Match: Q6ZIZ3|Q6ZIZ3_ORYSJ (Os08g0280600 protein OS=Oryza sativa subsp. japonica GN=OJ1003_E05.12 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.395e-18
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            + +W +AKL FFGVF +PK+ SSYS QL  YG+FW+ RF+D WESCS KKAV   +FTLVWN S
Sbjct:   17 VTLWTLAKLVFFGVFIIPKVCSSYSTQLARYGRFWLERFRDGWESCSHKKAVVAAVFTLVWNVS 80
[Close]
BLAST of CF811095 vs. TrEMBL
Match: B9G026|B9G026_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_26729 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.395e-18
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            + +W +AKL FFGVF +PK+ SSYS QL  YG+FW+ RF+D WESCS KKAV   +FTLVWN S
Sbjct:  508 VTLWTLAKLVFFGVFIIPKVCSSYSTQLARYGRFWLERFRDGWESCSHKKAVVAAVFTLVWNVS 571
[Close]
BLAST of CF811095 vs. TrEMBL
Match: B8B924|B8B924_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28591 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.395e-18
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            + +W +AKL FFGVF +PK+ SSYS QL  YG+FW+ RF+D WESCS KKAV   +FTLVWN S
Sbjct:  575 VTLWTLAKLVFFGVFIIPKVCSSYSTQLARYGRFWLERFRDGWESCSHKKAVVAAVFTLVWNVS 638
[Close]
BLAST of CF811095 vs. TrEMBL
Match: D7MNY6|D7MNY6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_332090 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.974e-8
Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = -2 
Query:    3 LTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 113
            L  +G FW+RRF+DAWESC+ KKAV+  +FTLVWN S
Sbjct:  408 LAKFGNFWMRRFRDAWESCNHKKAVSLALFTLVWNLS 444
[Close]
BLAST of CF811095 vs. TrEMBL
Match: B9RVU8|B9RVU8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1173020 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.108e-7
Identity = 28/64 (43.75%), Postives = 37/64 (57.81%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I +W++  +GFF  FT+PK+ S YS Q+     +   R  DAWE+CS KK VA    T  WN S
Sbjct:  313 ITMWRLCAIGFFIGFTIPKLYSCYSSQINQKVDYARGRVLDAWEACSHKKIVAASAITAFWNMS 376
[Close]
BLAST of CF811095 vs. Vitis vinifera peptide
Match: GSVIVT01020595001 (assembled CDS)

HSP 1 Score: 51.2174 bits (121), Expect = 1.068e-7
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQL---TXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            + + ++  LGFF  FT+PK+ S YS Q+     Y K WV    +AW +CS KK VA    T+ WN S
Sbjct:  204 LTVRRLCALGFFISFTIPKLYSCYSAQINTRVEYLKGWV---VEAWGACSHKKIVAASAVTVFWNLS 267
[Close]
BLAST of CF811095 vs. TAIR peptide
Match: AT5G58000.1 (| Symbols: | Reticulon family protein | chr5:23477416-23479496 FORWARD LENGTH=487)

HSP 1 Score: 95.5153 bits (236), Expect = 6.961e-21
Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = -2 
Query:    3 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWNXS 194
            I +W +AK GF G FT+PKI  SYS   + YG FW+RRF+DAWESC+ KKAVA  +FTLVWN S
Sbjct:  354 ITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESCNHKKAVALALFTLVWNLS 417
[Close]
BLAST of CF811095 vs. TAIR peptide
Match: AT4G28430.1 (| Symbols: | Reticulon family protein | chr4:14057846-14059772 FORWARD LENGTH=457)

HSP 1 Score: 55.0694 bits (131), Expect = 1.043e-8
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = -2 
Query:    9 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWN 194
            I +W++   GFF  FT+PK+ S Y+ QL    +   RRF +AW  C+ KK VA    T  WN
Sbjct:  318 ITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFVEAWGVCTHKKFVAGSAVTAFWN 379
[Close]
BLAST of CF811095 vs. TAIR peptide
Match: AT2G20590.1 (| Symbols: | Reticulon family protein | chr2:8867243-8869166 REVERSE LENGTH=431)

HSP 1 Score: 50.447 bits (119), Expect = 2.568e-7
Identity = 23/62 (37.10%), Postives = 35/62 (56.45%), Query Frame = -2 
Query:    9 IXIWKMAKLGFFGVFTVPKIVSSYSXQLTXYGKFWVRRFKDAWESCSPKKAVAFGIFTLVWN 194
            I +W+++  GFF  FT+PK+ S Y+ Q++   +    R  +AW  CS KK +A    T  WN
Sbjct:  290 ITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILAGSAVTAFWN 351
The following BLAST results are available for this feature:
BLAST of CF811095 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
RTNLS_ARATH9.014e-2062.50Reticulon-like protein B21 OS=Arabidopsis thaliana... [more]
RTNLR_ARATH1.350e-741.94Reticulon-like protein B18 OS=Arabidopsis thaliana... [more]
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BLAST of CF811095 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
POPTR_0006s19970.11.035e-2681.25[more]
POPTR_0018s11750.11.766e-2681.25[more]
POPTR_0007s01150.14.089e-735.94[more]
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BLAST of CF811095 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
ppa002580m2.940e-2267.19[more]
ppa014722m7.030e-841.79[more]
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BLAST of CF811095 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
B9T6V6|B9T6V6_RICCO1.702e-2481.25Putative uncharacterized protein OS=Ricinus commun... [more]
B9HB09|B9HB09_POPTR2.222e-2481.25Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9IME9|B9IME9_POPTR3.791e-2481.25Predicted protein (Fragment) OS=Populus trichocarp... [more]
B7FN98|B7FN98_MEDTR7.904e-2275.00Putative uncharacterized protein OS=Medicago trunc... [more]
C5YKG5|C5YKG5_SORBI8.179e-1965.63Putative uncharacterized protein Sb07g018020 OS=So... [more]
Q6ZIZ3|Q6ZIZ3_ORYSJ1.395e-1862.50Os08g0280600 protein OS=Oryza sativa subsp. japoni... [more]
B9G026|B9G026_ORYSJ1.395e-1862.50Putative uncharacterized protein OS=Oryza sativa s... [more]
B8B924|B8B924_ORYSI1.395e-1862.50Putative uncharacterized protein OS=Oryza sativa s... [more]
D7MNY6|D7MNY6_ARALY4.974e-864.86Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9RVU8|B9RVU8_RICCO1.108e-743.75Putative uncharacterized protein OS=Ricinus commun... [more]
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BLAST of CF811095 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010205950011.068e-741.79assembled CDS[more]
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BLAST of CF811095 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G58000.16.961e-2162.50| Symbols: | Reticulon family protein | chr5:2347... [more]
AT4G28430.11.043e-841.94| Symbols: | Reticulon family protein | chr4:1405... [more]
AT2G20590.12.568e-737.10| Symbols: | Reticulon family protein | chr2:8867... [more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF811095 ID=CF811095; Name=CF811095; organism=Vaccinium corymbosum; type=EST; length=198bp
GAGGANANATTCCAAACAAGGGTAAATATGCCAAAAGCCACTGCTTTCTT
GGGAGAGCATGATTCCCATGCATCTTTGAACCTTCTCACCCAAAATTTAC
CGTANTNGGTTAACTGGGNGGAATACGAAGAGACGATTTTTGGGACGGTG
AATACTCCAAAAAAGCCCAATTTGGCCATCTTCCAAATAGNGATGGNA
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