CF811148

EST Overview
NameCF811148
Unique NameCF811148
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length483
Libraries
Library NameType
LIBEST_014531 cDNA non acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CF811148 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s20060.1 ()

HSP 1 Score: 163.31 bits (412), Expect = 6.713e-41
Identity = 75/107 (70.09%), Postives = 86/107 (80.37%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFKPS 321
            A +N DK++TDVL ++RQACYKARD F+ACLEKES+KKPTEI +VGL YP ECKK R +FE  CR  WVKHFDR Y   K  QRLL+D E RRGPLSLPQPYTFKP+
Sbjct:    7 ASRNVDKIHTDVLSQSRQACYKARDAFFACLEKESDKKPTEIGSVGLQYPAECKKSRVEFEKNCRPAWVKHFDRLYCRNKTAQRLLEDKEIRRGPLSLPQPYTFKPT 113          
BLAST of CF811148 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s11790.1 ()

HSP 1 Score: 157.532 bits (397), Expect = 3.684e-39
Identity = 72/107 (67.29%), Postives = 84/107 (78.50%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFKPS 321
            A +N DK++TDVL ++RQACYKARD F+ACLEKES KKPTEI +VGL YP ECK  R +FE  CR  WVKHFDR +   K  QRLL+D E+RRGPL LPQPYTFKP+
Sbjct:    7 ASRNIDKIHTDVLSQSRQACYKARDAFFACLEKESGKKPTEIGSVGLQYPAECKNSRAEFEKNCRPAWVKHFDRLHCRNKTSQRLLEDKETRRGPLLLPQPYTFKPT 113          
BLAST of CF811148 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s11790.2 ()

HSP 1 Score: 133.265 bits (334), Expect = 7.439e-32
Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRG 282
            A +N DK++TDVL ++RQACYKARD F+ACLEKES KKPTEI +VGL YP ECK  R +FE  CR  WVKHFDR +   K  QRLL+D E+RRG
Sbjct:    7 ASRNIDKIHTDVLSQSRQACYKARDAFFACLEKESGKKPTEIGSVGLQYPAECKNSRAEFEKNCRPAWVKHFDRLHCRNKTSQRLLEDKETRRG 100          
BLAST of CF811148 vs. P. persica 1.0 peptide
Match: ppa024606m ()

HSP 1 Score: 161.384 bits (407), Expect = 1.823e-40
Identity = 73/107 (68.22%), Postives = 87/107 (81.31%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFKPS 321
            A ++PD+++TDVL  +RQACYKARD FYACLEKES+KK TEIA+ GLLYP ECK  R +F + CR +WVKHFD  Y   K L+RLLDD +SRRGPLSLPQPYTFKP+
Sbjct:    7 AARSPDEIHTDVLSSSRQACYKARDAFYACLEKESDKKQTEIASKGLLYPAECKASREEFVNHCRASWVKHFDALYCKNKSLKRLLDDKDSRRGPLSLPQPYTFKPT 113          
BLAST of CF811148 vs. TrEMBL
Match: B9SBX3|B9SBX3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0700080 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.928e-42
Identity = 79/105 (75.24%), Postives = 90/105 (85.71%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFK 315
            A +NPDK++TDVL KAR+ACYKARD FYACLEKES KKPTEI +VGLLYP+ECK  R ++E  CR +WVKHFDR YA  KR+QRLLDD +SRRGPLSLPQPYTFK
Sbjct:    7 ASRNPDKIHTDVLVKAREACYKARDAFYACLEKESGKKPTEIGSVGLLYPMECKNSRAKYEKGCRASWVKHFDRLYARDKRVQRLLDDKDSRRGPLSLPQPYTFK 111          
BLAST of CF811148 vs. TrEMBL
Match: D7MNY7|D7MNY7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495905 PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.491e-41
Identity = 77/107 (71.96%), Postives = 88/107 (82.24%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFKPS 321
            A  NP++V+ DVL KAR ACYKARD FYACLEKES KKPTEIATVGLLYP EC   R QF + CR++WVKHFDR+Y   KR+QRLLDD + R+GP+SLPQPYTFKPS
Sbjct:    7 ASSNPNEVHEDVLLKARDACYKARDAFYACLEKESGKKPTEIATVGLLYPKECSNSRTQFVNNCRSSWVKHFDREYCRNKRVQRLLDDGDERKGPMSLPQPYTFKPS 113          
BLAST of CF811148 vs. TrEMBL
Match: Q8RXH9|Q8RXH9_ARATH (AT5G58005 protein OS=Arabidopsis thaliana GN=AT5G58005 PE=4 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 7.660e-41
Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFKPS 321
            A  NP+ V+ DVL KAR ACYKARD FYACLEKES KKPTEIATVGLLYP EC   R QF + CR++WVKHFDR+Y   KR+QRLLDD + R+GP+SLPQPYTFKPS
Sbjct:    7 ASSNPNDVHEDVLLKARDACYKARDAFYACLEKESGKKPTEIATVGLLYPKECSNSRTQFVNNCRSSWVKHFDREYCRNKRVQRLLDDGDERKGPMSLPQPYTFKPS 113          
BLAST of CF811148 vs. TrEMBL
Match: B9HAS3|B9HAS3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_653557 PE=4 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.169e-39
Identity = 75/107 (70.09%), Postives = 86/107 (80.37%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFKPS 321
            A +N DK++TDVL ++RQACYKARD F+ACLEKES+KKPTEI +VGL YP ECKK R +FE  CR  WVKHFDR Y   K  QRLL+D E RRGPLSLPQPYTFKP+
Sbjct:    7 ASRNVDKIHTDVLSQSRQACYKARDAFFACLEKESDKKPTEIGSVGLQYPAECKKSRVEFEKNCRPAWVKHFDRLYCRNKTAQRLLEDKEIRRGPLSLPQPYTFKPT 113          
BLAST of CF811148 vs. TrEMBL
Match: D7U198|D7U198_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_37.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023584001 PE=4 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.223e-38
Identity = 76/94 (80.85%), Postives = 84/94 (89.36%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRG 282
            A  NP+ ++TDVL +ARQACYKARD FYACLEKESNKKPTEIA+VGLLYPVECK+ R Q+ SQCR TWVKHFDRQY SKKR+QRLLDDNESRRG
Sbjct:    7 ASTNPNTIHTDVLSEARQACYKARDAFYACLEKESNKKPTEIASVGLLYPVECKESRAQYVSQCRPTWVKHFDRQYCSKKRVQRLLDDNESRRG 100          
BLAST of CF811148 vs. TrEMBL
Match: C5YLL3|C5YLL3_SORBI (Putative uncharacterized protein Sb07g021670 OS=Sorghum bicolor GN=Sb07g021670 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.306e-37
Identity = 72/98 (73.47%), Postives = 82/98 (83.67%), Query Frame = 1
Query:   22 VYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFK 315
            V  DVL K R+ACYKARD FYAC+EK ++KKPTEIAT+GLLYP +CKK R  + S CR TWVKHFDRQY SKKR+QRLLD +E RRGP+SLPQPYTFK
Sbjct:   18 VMPDVLAKGREACYKARDAFYACVEKHADKKPTEIATMGLLYPADCKKSRANYVSNCRPTWVKHFDRQYCSKKRVQRLLDGDEDRRGPISLPQPYTFK 115          
BLAST of CF811148 vs. TrEMBL
Match: B9IMF4|B9IMF4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_835955 PE=4 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.934e-37
Identity = 72/107 (67.29%), Postives = 84/107 (78.50%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFKPS 321
            A +N DK++TDVL ++RQACYKARD F+ACLEKES KKPTEI +VGL YP ECK  R +FE  CR  WVKHFDR +   K  QRLL+D E+RRGPL LPQPYTFKP+
Sbjct:    7 ASRNIDKIHTDVLSQSRQACYKARDAFFACLEKESGKKPTEIGSVGLQYPAECKNSRAEFEKNCRPAWVKHFDRLHCRNKTSQRLLEDKETRRGPLLLPQPYTFKPT 113          
BLAST of CF811148 vs. TrEMBL
Match: B6T8C0|B6T8C0_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 6.710e-37
Identity = 71/98 (72.45%), Postives = 82/98 (83.67%), Query Frame = 1
Query:   22 VYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFK 315
            V +DVL K R+ACYKARD FYAC+EK ++KKPTEIAT+GLLYP +CKK R  F S CR TWVKHFDRQY +KKR+QRLLD +  RRGP+SLPQPYTFK
Sbjct:   19 VMSDVLAKGREACYKARDAFYACIEKHADKKPTEIATMGLLYPADCKKSRADFVSNCRPTWVKHFDRQYCAKKRVQRLLDGDGDRRGPMSLPQPYTFK 116          
BLAST of CF811148 vs. TrEMBL
Match: B6T1Q4|B6T1Q4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 8.764e-37
Identity = 71/98 (72.45%), Postives = 82/98 (83.67%), Query Frame = 1
Query:   22 VYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFK 315
            V  DVL K R+ACYKARD FYAC+EK ++KKPTEIAT+GLLYP +CKK R  F S CR TWVKHFDRQY++KKR+QRLLD +  RRGP+SLPQPYTFK
Sbjct:   15 VMPDVLAKGREACYKARDAFYACIEKHADKKPTEIATMGLLYPADCKKSRADFVSNCRPTWVKHFDRQYSAKKRVQRLLDGDGDRRGPMSLPQPYTFK 112          
BLAST of CF811148 vs. TrEMBL
Match: Q6Z9E8|Q6Z9E8_ORYSJ (Os08g0441400 protein OS=Oryza sativa subsp. japonica GN=P0528B09.34 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.419e-36
Identity = 68/98 (69.39%), Postives = 81/98 (82.65%), Query Frame = 1
Query:   22 VYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFK 315
            V  DVL K R+ACYKARD FY C+EK ++KKPTEIAT+GLLYP +CKK R  F + CR +WVKHFDRQY++KKR+QRLLD  + RRGP+SLPQPYTFK
Sbjct:   25 VMADVLSKGREACYKARDAFYTCVEKHADKKPTEIATMGLLYPADCKKSRANFVNSCRPSWVKHFDRQYSAKKRVQRLLDGGDDRRGPISLPQPYTFK 122          
BLAST of CF811148 vs. Vitis vinifera peptide
Match: GSVIVT01023584001 (assembled CDS)

HSP 1 Score: 162.54 bits (410), Expect = 7.043e-41
Identity = 76/94 (80.85%), Postives = 84/94 (89.36%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRG 282
            A  NP+ ++TDVL +ARQACYKARD FYACLEKESNKKPTEIA+VGLLYPVECK+ R Q+ SQCR TWVKHFDRQY SKKR+QRLLDDNESRRG
Sbjct:    7 ASTNPNTIHTDVLSEARQACYKARDAFYACLEKESNKKPTEIASVGLLYPVECKESRAQYVSQCRPTWVKHFDRQYCSKKRVQRLLDDNESRRG 100          
BLAST of CF811148 vs. TAIR peptide
Match: AT5G58005.2 (| Symbols: | Cytochrome c oxidase, subunit Vib family protein | chr5:23482234-23482757 FORWARD LENGTH=116)

HSP 1 Score: 169.859 bits (429), Expect = 6.343e-43
Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFKPS 321
            A  NP+ V+ DVL KAR ACYKARD FYACLEKES KKPTEIATVGLLYP EC   R QF + CR++WVKHFDR+Y   KR+QRLLDD + R+GP+SLPQPYTFKPS
Sbjct:    7 ASSNPNDVHEDVLLKARDACYKARDAFYACLEKESGKKPTEIATVGLLYPKECSNSRTQFVNNCRSSWVKHFDREYCRNKRVQRLLDDGDERKGPMSLPQPYTFKPS 113          
BLAST of CF811148 vs. TAIR peptide
Match: AT5G58005.1 (| Symbols: | Cytochrome c oxidase, subunit Vib family protein | chr5:23482234-23482757 FORWARD LENGTH=116)

HSP 1 Score: 169.859 bits (429), Expect = 6.343e-43
Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1
Query:    1 APQNPDKVYTDVLFKARQACYKARDEFYACLEKESNKKPTEIATVGLLYPVECKKFRNQFESQCRTTWVKHFDRQYASKKRLQRLLDDNESRRGPLSLPQPYTFKPS 321
            A  NP+ V+ DVL KAR ACYKARD FYACLEKES KKPTEIATVGLLYP EC   R QF + CR++WVKHFDR+Y   KR+QRLLDD + R+GP+SLPQPYTFKPS
Sbjct:    7 ASSNPNDVHEDVLLKARDACYKARDAFYACLEKESGKKPTEIATVGLLYPKECSNSRTQFVNNCRSSWVKHFDREYCRNKRVQRLLDDGDERKGPMSLPQPYTFKPS 113          
The following BLAST results are available for this feature:
BLAST of CF811148 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
POPTR_0006s20060.16.713e-4170.09[more]
POPTR_0018s11790.13.684e-3967.29[more]
POPTR_0018s11790.27.439e-3264.89[more]
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BLAST of CF811148 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa024606m1.823e-4068.22[more]
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BLAST of CF811148 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
B9SBX3|B9SBX3_RICCO6.928e-4275.24Putative uncharacterized protein OS=Ricinus commun... [more]
D7MNY7|D7MNY7_ARALY4.491e-4171.96Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q8RXH9|Q8RXH9_ARATH7.660e-4171.96AT5G58005 protein OS=Arabidopsis thaliana GN=AT5G5... [more]
B9HAS3|B9HAS3_POPTR7.169e-3970.09Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7U198|D7U198_VITVI1.223e-3880.85Whole genome shotgun sequence of line PN40024, sca... [more]
C5YLL3|C5YLL3_SORBI2.306e-3773.47Putative uncharacterized protein Sb07g021670 OS=So... [more]
B9IMF4|B9IMF4_POPTR3.934e-3767.29Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B6T8C0|B6T8C0_MAIZE6.710e-3772.45Putative uncharacterized protein OS=Zea mays PE=4 ... [more]
B6T1Q4|B6T1Q4_MAIZE8.764e-3772.45Putative uncharacterized protein OS=Zea mays PE=4 ... [more]
Q6Z9E8|Q6Z9E8_ORYSJ7.419e-3669.39Os08g0441400 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of CF811148 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010235840017.043e-4180.85assembled CDS[more]
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BLAST of CF811148 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G58005.26.343e-4371.96| Symbols: | Cytochrome c oxidase, subunit Vib fa... [more]
AT5G58005.16.343e-4371.96| Symbols: | Cytochrome c oxidase, subunit Vib fa... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003213Cytochrome c oxidase, subunit VIbGENE3D1.10.10.140no descriptioncoord: 16..79
score: 2.9
IPR003213Cytochrome c oxidase, subunit VIbPFAMPF02297COX6Bcoord: 16..86
score: 9.7
IPR003213Cytochrome c oxidase, subunit VIbSUPERFAMILY47694Cytochrome c oxidase subunit hcoord: 15..85
score: 8.4

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF811148 ID=CF811148; Name=CF811148; organism=Vaccinium corymbosum; type=EST; length=483bp
GCCCCGCAGAACCCAGACAAAGTCTACACCGATGTCCTCTTCAAAGCTAG
ACAGGCTTGCTACAAGGCGCGTGACGAATTTTACGCCTGTTTGGAGAAGG
AATCGAACAAGAAACCAACCGAAATTGCCACCGTAGGACTACTCTATCCT
GTGGAATGCAAGAAATTCAGGAACCAATTCGAAAGCCAATGTCGAACCAC
TTGGGTGAAGCATTTTGATCGGCAATACGCATCGAAGAAGAGGCTTCAGA
GGCTTTTAGATGACAATGAGTCCAGAAGAGGTCCGTTGTCGCTTCCACAG
CCTTACACTTTCAAACCCAGTAGGTGATTGTTTGTTTATAAGTATGGACC
TTTGGGTGTTCTTGAAAAGTTGTTTCTGCGGTAAGTTTTGGATTGAGAAA
TGTGGGCTGTATGGCTGAACATATGTCAAACTGTTATAATTTCCTTTACT
GAGTAGTTATATGGTAAATCTGTCGAAGCAGAG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR003213Cyt_c_oxidase_su6B