CV091012

EST Overview
NameCV091012
Unique NameCV091012
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length433
Libraries
Library NameType
LIBEST_014531 cDNA non acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
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BLAST of CV091012 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0016s14740.1 ()

HSP 1 Score: 70.0922 bits (170), Expect = 6.071e-13
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 GVFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAVR 111
            G FGL  G+G AT+CL CTKLVCLHTPYCNSAPEAVR
Sbjct:  564 GGFGLAVGVGFATLCLMCTKLVCLHTPYCNSAPEAVR 600
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BLAST of CV091012 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s11190.1 ()

HSP 1 Score: 68.1662 bits (165), Expect = 2.307e-12
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 GVFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAVR 111
            G FGL  G+G A++CL CTKLVCLHTPYCNSAPEAVR
Sbjct:  569 GGFGLAIGVGFASLCLMCTKLVCLHTPYCNSAPEAVR 605
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BLAST of CV091012 vs. P. persica 1.0 peptide
Match: ppa003166m ()

HSP 1 Score: 68.9366 bits (167), Expect = 9.737e-13
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 1 
Query:   10 GLITGIGLATVCLTCTKLVCLHTPYCNSAPEAVR 111
            G++ G+G AT+CLTCTKLVCLHTPYCNSAPEAVR
Sbjct:  563 GILMGVGFATLCLTCTKLVCLHTPYCNSAPEAVR 596
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BLAST of CV091012 vs. TrEMBL
Match: A5B2Q0|A5B2Q0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036615 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.394e-10
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    4 VFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAVR 111
            + GL+ G+GLA +CLTCTKLVCLHTPYCNSAPEAVR
Sbjct:  561 ICGLMIGVGLAALCLTCTKLVCLHTPYCNSAPEAVR 596
[Close]
BLAST of CV091012 vs. TrEMBL
Match: B9MTT9|B9MTT9_POPTR (ZIP transporter OS=Populus trichocarpa GN=POPTRDRAFT_589614 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.106e-10
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 GVFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAVR 111
            G FGL  G+G A++CL CTKLVCLHTPYCNSAPEAVR
Sbjct:  569 GGFGLAIGVGFASLCLMCTKLVCLHTPYCNSAPEAVR 605
[Close]
BLAST of CV091012 vs. TrEMBL
Match: B9T0N8|B9T0N8_RICCO (Metal ion transporter, putative OS=Ricinus communis GN=RCOM_0126280 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.180e-9
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 1 
Query:   10 GLITGIGLATVCLTCTKLVCLHTPYCNSAPEAVR 111
            GL  G+G AT+CL CTKLVCLHTPYCNSAPEAVR
Sbjct:  563 GLAIGVGFATLCLMCTKLVCLHTPYCNSAPEAVR 596
[Close]
BLAST of CV091012 vs. TrEMBL
Match: D7TKY9|D7TKY9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_56.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029868001 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.541e-9
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 1 
Query:    4 VFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEA 105
            + GL+ G+GLA +CLTCTKLVCLHTPYCNSAPEA
Sbjct:  475 ICGLMIGVGLAALCLTCTKLVCLHTPYCNSAPEA 508
[Close]
BLAST of CV091012 vs. TrEMBL
Match: Q9C9Z1|Q9C9Z1_ARATH (Putative uncharacterized protein F17O14.12 OS=Arabidopsis thaliana GN=At3g08650 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.796e-8
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1 
Query:    1 GVFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAVR 111
            G  G++ G+  A VCLT T+LVCLHTPYCNSAPEAVR
Sbjct:  559 GSVGMVLGLACAVVCLTFTRLVCLHTPYCNSAPEAVR 595
[Close]
BLAST of CV091012 vs. TrEMBL
Match: Q8L600|Q8L600_ARATH (Putative uncharacterized protein At3g08650 OS=Arabidopsis thaliana GN=At3g08650 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.796e-8
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1 
Query:    1 GVFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAVR 111
            G  G++ G+  A VCLT T+LVCLHTPYCNSAPEAVR
Sbjct:  559 GSVGMVLGLACAVVCLTFTRLVCLHTPYCNSAPEAVR 595
[Close]
BLAST of CV091012 vs. TrEMBL
Match: D7L766|D7L766_ARALY (Metal transporter family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_897002 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.457e-8
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1 
Query:    1 GVFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAVR 111
            G  G++ G+  A VCLT T+LVCLHTPYCNSAPEAVR
Sbjct:  559 GSVGMVLGLVCAVVCLTFTRLVCLHTPYCNSAPEAVR 595
[Close]
BLAST of CV091012 vs. TrEMBL
Match: B4FBV3|B4FBV3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.482e-7
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 1 
Query:    4 VFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAV 108
            V GL+ G+  A+VCL  T+ +CLHTPYCNSAPEAV
Sbjct:  203 VVGLLVGVAFASVCLMSTRFICLHTPYCNSAPEAV 237
[Close]
BLAST of CV091012 vs. TrEMBL
Match: B4FAU1|B4FAU1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.482e-7
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 1 
Query:    4 VFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAV 108
            V GL+ G+  A+VCL  T+ +CLHTPYCNSAPEAV
Sbjct:  538 VVGLLVGVAFASVCLMSTRFICLHTPYCNSAPEAV 572
[Close]
BLAST of CV091012 vs. TrEMBL
Match: C5YT45|C5YT45_SORBI (Putative uncharacterized protein Sb08g004950 OS=Sorghum bicolor GN=Sb08g004950 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.160e-7
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 1 
Query:    4 VFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAV 108
            + GL+ GI  A+VCL  T+ +CLHTPYCNSAPEAV
Sbjct:  541 IVGLLIGIAFASVCLMSTRFICLHTPYCNSAPEAV 575
[Close]
BLAST of CV091012 vs. Vitis vinifera peptide
Match: GSVIVT01029868001 (assembled CDS)

HSP 1 Score: 65.855 bits (159), Expect = 7.125e-12
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 1 
Query:    4 VFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEA 105
            + GL+ G+GLA +CLTCTKLVCLHTPYCNSAPEA
Sbjct:  475 ICGLMIGVGLAALCLTCTKLVCLHTPYCNSAPEA 508
[Close]
BLAST of CV091012 vs. TAIR peptide
Match: AT3G08650.2 (| Symbols: | ZIP metal ion transporter family | chr3:2624694-2627308 REVERSE LENGTH=619)

HSP 1 Score: 61.2326 bits (147), Expect = 2.448e-10
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1 
Query:    1 GVFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAVR 111
            G  G++ G+  A VCLT T+LVCLHTPYCNSAPEAVR
Sbjct:  583 GSVGMVLGLACAVVCLTFTRLVCLHTPYCNSAPEAVR 619
[Close]
BLAST of CV091012 vs. TAIR peptide
Match: AT3G08650.1 (| Symbols: | ZIP metal ion transporter family | chr3:2624694-2626879 REVERSE LENGTH=595)

HSP 1 Score: 61.2326 bits (147), Expect = 2.448e-10
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1 
Query:    1 GVFGLITGIGLATVCLTCTKLVCLHTPYCNSAPEAVR 111
            G  G++ G+  A VCLT T+LVCLHTPYCNSAPEAVR
Sbjct:  559 GSVGMVLGLACAVVCLTFTRLVCLHTPYCNSAPEAVR 595
The following BLAST results are available for this feature:
BLAST of CV091012 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
POPTR_0016s14740.16.071e-1381.08[more]
POPTR_0006s11190.12.307e-1278.38[more]
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BLAST of CV091012 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa003166m9.737e-1382.35[more]
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BLAST of CV091012 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A5B2Q0|A5B2Q0_VITVI1.394e-1080.56Putative uncharacterized protein OS=Vitis vinifera... [more]
B9MTT9|B9MTT9_POPTR3.106e-1078.38ZIP transporter OS=Populus trichocarpa GN=POPTRDRA... [more]
B9T0N8|B9T0N8_RICCO1.180e-982.35Metal ion transporter, putative OS=Ricinus communi... [more]
D7TKY9|D7TKY9_VITVI1.541e-979.41Whole genome shotgun sequence of line PN40024, sca... [more]
Q9C9Z1|Q9C9Z1_ARATH3.796e-870.27Putative uncharacterized protein F17O14.12 OS=Arab... [more]
Q8L600|Q8L600_ARATH3.796e-870.27Putative uncharacterized protein At3g08650 OS=Arab... [more]
D7L766|D7L766_ARALY8.457e-870.27Metal transporter family protein OS=Arabidopsis ly... [more]
B4FBV3|B4FBV3_MAIZE5.482e-765.71Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B4FAU1|B4FAU1_MAIZE5.482e-765.71Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C5YT45|C5YT45_SORBI7.160e-765.71Putative uncharacterized protein Sb08g004950 OS=So... [more]
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BLAST of CV091012 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010298680017.125e-1279.41assembled CDS[more]
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BLAST of CV091012 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G08650.22.448e-1070.27| Symbols: | ZIP metal ion transporter family | c... [more]
AT3G08650.12.448e-1070.27| Symbols: | ZIP metal ion transporter family | c... [more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV091012 ID=CV091012; Name=CV091012; organism=Vaccinium corymbosum; type=EST; length=433bp
GGTGTTTTTGGCCTCATAACGGGAATTGGTTTAGCTACTGTGTGCCTAAC
ATGCACTAAGTTGGTTTGCTTGCATACTCCTTACTGCAACTCTGCTCCAG
AGGCTGTCAGATAATTGCATGAGAACTCTGCTCCTGGAGGAGTTAAGACT
TGATCATGGAGGAGTCAAGTTGTACAAGTGCTTGACAAGGGTCTGGATCC
GCATCCGATTTTTTTAATTTTCTGTATCATTGATCGTGCTCCATGACTTC
AATTTTTACTTCTACTAATGCAGATAATTAGGTAGATTGAAACTTCAGTT
TACAACTTCATCATGATGAAATATATACCATTGACCCTAGAATAGGTGTG
AACTGCAGAAGTTGTTGGAACTGGTATTTGTCAACTTCACCTTTTTGATT
CTCTGGAATGATAACTCCAGATATTTAATCGAT
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